30 Commits

Author SHA1 Message Date
Alex Newman d13662d5d8 Cynical deletion: close 27 issues by removing defenders + tolerators (#2141)
* fix: mirror migration 28 in SessionStore so pending_messages.tool_use_id and worker_pid columns are created (#2139)

SessionStore's inline migration list jumped from v27 to v29, skipping
rebuildPendingMessagesForSelfHealingClaim. The worker uses SessionStore
directly via worker/DatabaseManager.ts and bypasses the canonical
MigrationRunner, so fresh installs ended up at "max v29" with neither
column present — every queue claim and observation insert failed.

Adds addPendingMessagesToolUseIdAndWorkerPidColumns following the existing
mirror precedent (addObservationSubagentColumns / addObservationsUniqueContentHashIndex).
Uses ALTER TABLE + column-existence guards so already-broken DBs at v29
self-heal on next worker boot.

Verified on fresh DB and on a synthetic v29-without-v28 broken DB:
both columns and indexes (idx_pending_messages_worker_pid,
ux_pending_session_tool) appear after one boot.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: wrap v28 mirror dedup+index creation in transaction

Addresses Greptile P2 review on PR #2140: matches the existing pattern in
addObservationsUniqueContentHashIndex (v29 mirror at SessionStore.ts:1127)
and runner.ts rebuildPendingMessagesForSelfHealingClaim. A crash between
the dedup DELETE and the schema_versions INSERT no longer leaves the DB
in a half-applied state.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs(plan): cynical-deletion plan for 29 open issues

9-phase plan applying delete-first lens to triaged issue corpus.
Headlines: kill defenders (orphan cleanup, EncodedCommand spawn,
restart-port-steal) and tolerators (silent JSON drops, drifted SSE
filters). Each phase closes a named subset of issues.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: delete process-management theater (Phase 1: DEL-1 + DEL-2)

Delete aggressiveStartupCleanup, the PowerShell -EncodedCommand
spawn branch, and the restart-with-port-steal sequence. Replace
daemon spawning with a single uniform child_process.spawn path
using arg-array form, keeping setsid on Unix when available.

The defenders (orphan cleanup, duplicate-worker probes, port
stealing) bred more bugs than they fixed. PID file with start-time
token already provides correct OS-trust ownership; restart now
requests httpShutdown, waits 5s for the port to free, then exits 1
if it didn't (user resolves). Net -247 lines.

Closes #2090, #2095 (already fixed at session-init.ts:78), #2107,
#2111, #2114, #2117, #2123, #2097, #2135.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: observer-sessions trust boundary via CLAUDE_MEM_INTERNAL env (Phase 2: DEL-9)

Replace the cwd === OBSERVER_SESSIONS_DIR discriminator (which every
consumer must repeat and inevitably drifts) with a single env-var
trust boundary set once at spawn time in buildIsolatedEnv.

- buildIsolatedEnv now sets CLAUDE_MEM_INTERNAL=1, covering all three
  spawn sites (SDKAgent, KnowledgeAgent.prime, KnowledgeAgent.executeQuery)
- shouldTrackProject checks the env var first (cwd check stays as
  belt-and-braces fallback)
- New shared shouldEmitProjectRow predicate — SSE broadcaster and
  pagination filter share the same predicate so they can never drift
  apart (#2118)
- ObservationBroadcaster filters observer rows from SSE stream
- PaginationHelper hardcoded 'observer-sessions' replaced with
  OBSERVER_SESSIONS_PROJECT const
- project-filter basename match pass — *observer-sessions* now matches
  basename, not just full path (globToRegex's [^/]* can't cross /)
  (#2126 item 1)
- New `claude-mem cleanup [--dry-run]` subcommand wires CleanupV12_4_3
  through to the worker for #2126 item 5

Closes #2118, #2126.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: strip proxy env vars before spawning worker (Phase 4: CON-1)

User's HTTP_PROXY/HTTPS_PROXY config was bleeding into internal AI
calls when claude-mem spawns the claude subprocess, causing
connection failures. Strip unconditionally — no passthrough knob,
which rejects #2099's whitelist proposal.

Closes #2115, #2099.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: fail-fast on silent drops in stdin/file-context/memory-save (Phase 5: FF-1)

Three independent fail-fast fixes:

#2089 — stdin-reader silent drop. Non-empty stdin that fails JSON.parse
now rejects with a clear error instead of resolving undefined. Empty
stdin still resolves undefined.

#2094 — PreToolUse:Read truncation Edit deadlock. file-context handler
no longer returns a fake truncated Read result via updatedInput.
Removes userOffset/userLimit/truncated machinery; injects the timeline
via additionalContext only and lets the real Read pass through. Read
state and Claude's expectation now stay consistent, eliminating the
infinite Edit retry loop.

#2116 — /api/memory/save metadata drop + project bug. Schema accepts
metadata as a documented JSON column (migration 30 adds observations.
metadata TEXT, mirrored in SessionStore). Schema also tightened to
.strict() so unknown top-level fields fail fast instead of being
silently dropped. Project resolution now consults metadata.project as
a fallback before defaultProject.

Closes #2089, #2094, #2116.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: small deletions — Zod externalize / Gemini fallback / session timeout / installCLI alias (Phase 6)

DEL-4 (#2113): Externalize zod from mcp-server.cjs and context-generator.cjs
hook bundles so OpenCode's runtime resolves a single Zod copy. Worker
keeps Zod bundled (it's a daemon subprocess, not in OpenCode's hook
bundle). Added zod to plugin/package.json so externalized requires
resolve at runtime.

DEL-5 (#2087): Delete the never-wired GeminiAgent → Claude fallback.
fallbackAgent was always null in production. On 429 the agent now
throws cleanly (message stays pending for retry). Removed
setFallbackAgent, FallbackAgent interface, and the 429 fallback
branch from both GeminiAgent and OpenRouterAgent. Updated docs
that claimed automatic Claude fallback.

DEL-6 (#2127, #2098): Raise MAX_SESSION_WALL_CLOCK_MS from 4h to
24h. The timeout is a real guard against runaway-cost loops (per
issue #1590), but 4h kills legitimate long Claude Code days. 24h
preserves the guard while never hitting in normal use. No knob —
a session approaching this age is a bug worth investigating, not
a value worth tuning.

DEL-8 (#2054): Delete installCLI() alias function. Saves 4 keystrokes
at the cost of cross-platform shell-config mutation surface — not
worth it. Canonical entry is npx claude-mem (and bunx). Uninstall
now strips legacy alias/function lines from ~/.bashrc, ~/.zshrc,
and the PowerShell profile.

Closes #2087, #2098, #2113, #2127, #2054.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: de-hardcode worker port + multi-account commit (Phase 3: CON-2 + DEL-7)

Replace hardcoded 37777 fallbacks with SettingsDefaultsManager.get(
'CLAUDE_MEM_WORKER_PORT') in npx-cli (runtime/install/uninstall),
opencode-plugin, OpenClaw installer, SearchRoutes example URLs.
Timeline-report SKILL.md now resolves WORKER_PORT from settings.json
at the top and uses ${WORKER_PORT} in all curl invocations.
Remaining 37777 literals are doc comments + viewer build-time form-
field placeholder (which is replaced by /api/settings on mount).

hooks.json: add cygpath POSIX→Windows path translation between _R
resolution and node invocation. No-op on macOS/Linux. Closes the
Windows + Git Bash MODULE_NOT_FOUND in #2109.

CLAUDE.md gains a Multi-account section documenting CLAUDE_MEM_DATA_DIR
+ optional CLAUDE_MEM_WORKER_PORT — every existing path/port code
path now honors them.

Closes #2103, #2109, #2101.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: install/uninstall improvements (Phase 7: #2106)

5 fixes for the install/uninstall flow:

Item 1 — multiselect default. install.ts no longer pre-selects every
detected IDE; user explicitly opts in.

Item 3 — shutdown-before-overwrite. New
src/services/install/shutdown-helper.ts shared by install and
uninstall: POSTs /api/admin/shutdown then polls /api/health until
the worker stops responding. install calls it before
copyPluginToMarketplace so reinstall over a running worker doesn't
conflict; uninstall calls it before deletion.

Item 4 — uninstall path coverage. Removes ~/.npm/_npx/*/node_modules/
claude-mem, ~/.cache/claude-cli-nodejs/*/mcp-logs-plugin-claude-mem-*,
~/.claude/plugins/data/claude-mem-thedotmack/. Best-effort: per-path
try/catch so a single permission failure doesn't abort uninstall.
chroma-mcp shutdown is implicit via the worker's GracefulShutdown
cascade in item 3's helper.

Item 5 — install summary documents "Close all Claude Code sessions
before uninstalling, or ~/.claude-mem will be recreated by active
hooks."

Item 6 — real-port query. After install, fetches /api/health on the
configured port with 3s timeout. Reports actually-bound port if the
response carries it; falls back to requested port. No retry loop.

Closes #2106 (items 1, 3, 4, 5, 6). Items 2, 7 closed separately
as already-fixed and insufficient-detail.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: pin chroma-mcp to 0.2.6 (Phase 8: DEL-3 lite)

Replace unpinned 'chroma-mcp' arg with chroma-mcp==0.2.6 in both
local and remote modes. Pinning makes installs deterministic across
machines and across time, eliminating the dependency-drift class
of bugs.

Verified 0.2.6 in a clean uv cache: starts cleanly, no httpcore/
httpx ImportError, no --with flags needed. The --with flags removed
in a0dd516c are not required at this pin (transitive deps resolve
correctly when the top-level version is fixed).

#2102's three protections (transport cleanup on failure, stale onclose
handler guard, 10s reconnect backoff) confirmed intact.

Closes #2046, #2085, #2102.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test: update stale assertions for per-UID port + migration 30 (Phase 9)

SettingsDefaultsManager.CLAUDE_MEM_WORKER_PORT default is per-UID
(37700 + uid%100), not literal '37777'. Three assertions in
settings-defaults-manager.test.ts now compute the expected value
the same way the source does.

migration-runner.test.ts: drop expect(versions).toContain(19)
(version 19 was a noop never recorded — pre-existing bug at parent),
add expect(versions).toContain(30) for the new observations.metadata
column added in Phase 5.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile P1/P2 review comments on PR #2141

P1: spawnDaemon return value was unchecked in worker-service.ts restart
case, so a failed spawn silently exited 0 with a misleading "Worker
restart spawned" log. Now error and exit 1 when restartPid is undefined.

P2: shutdown-helper.ts health-poll catch treated AbortError (timeout)
the same as connection-refused, so a slow worker could be reported
confirmedStopped while still holding file locks. Now distinguish:
AbortError continues polling; other errors return confirmedStopped.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* build: rebuild plugin artifacts after merging main

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address CodeRabbit review comments on PR #2141

- hooks.json: quote $HOME in cache lookup so paths with spaces work
- timeline-report SKILL.md: fall back when process.getuid is unavailable (Windows)
- opencode-plugin: validate CLAUDE_MEM_WORKER_PORT before using
- uninstall.ts: only strip alias lines, not function declarations (multi-line bodies left intact)
- MemoryRoutes: trim whitespace-only project before precedence resolution
- SessionStore migration 21: preserve metadata column if observations already has it
- stdin-reader test: restore full property descriptor to avoid cross-test pollution

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-25 21:23:24 -07:00
Alex Newman c648d5d8d2 feat: Knowledge Agents — queryable corpora from claude-mem (#1653)
* feat: add knowledge agent types, store, builder, and renderer

Phase 1 of Knowledge Agents feature. Introduces corpus compilation
pipeline that filters observations from the database into portable
corpus files stored at ~/.claude-mem/corpora/.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add corpus CRUD HTTP endpoints and wire into worker service

Phase 2 of Knowledge Agents. Adds CorpusRoutes with 5 endpoints
(build, list, get, delete, rebuild) and registers them during
worker background initialization alongside SearchRoutes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add KnowledgeAgent with V1 SDK prime/query/reprime

Phase 3 of Knowledge Agents. Uses Agent SDK V1 query() with
resume and disallowedTools for Q&A-only knowledge sessions.
Auto-reprimes on session expiry. Adds prime, query, and reprime
HTTP endpoints to CorpusRoutes.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add MCP tools and skill for knowledge agents

Phase 4 of Knowledge Agents. Adds build_corpus, list_corpora,
prime_corpus, and query_corpus MCP tools delegating to worker
HTTP endpoints. Includes /knowledge-agent skill with workflow docs.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: handle SDK process exit in KnowledgeAgent, add e2e test

The Agent SDK may throw after yielding all messages when the
Claude process exits with a non-zero code. Now tolerates this
if session_id/answer were already captured. Adds comprehensive
e2e test script (31 assertions) orchestrated via tmux-cli.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: use settings model ID instead of hardcoded model in KnowledgeAgent

Reads CLAUDE_MEM_MODEL from user settings via getModelId(), matching
the existing SDKAgent pattern. No more hardcoded model assumptions.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: improve knowledge agents developer experience

Add public documentation page, rebuild/reprime MCP tools, and actionable
error messages. DX review scored knowledge agents 4/10 — core engineering
works (31/31 e2e) but the feature was invisible. This addresses
discoverability (docs, cross-links), API completeness (missing MCP tools),
and error quality (fix/example fields in error responses).

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* docs: add quick start guide to knowledge agents page

Covers the three main use cases upfront: creating an agent, asking a
single question, and starting a fresh conversation with reprime. Includes
keeping-it-current section for rebuild + reprime workflow.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: address code review issues — path traversal, session safety, prompt injection

- Block path traversal in CorpusStore with alphanumeric name validation and resolved path check
- Harden system prompt against instruction injection from untrusted corpus content
- Validate question field as non-empty string in query endpoint
- Only persist session_id after successful prime (not null on failure)
- Persist refreshed session_id after query execution
- Only auto-reprime on session resume errors, not all query failures
- Add fenced code block language tags to SKILL.md

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: address remaining code review issues — e2e robustness, MCP validation, docs

- Harden e2e curl wrappers with connect-timeout, fallback to HTTP 000 on transport failure
- Use curl_post wrapper consistently for all long-running POST calls
- Add runtime name validation to all corpus MCP tool handlers
- Fix docs: soften hallucination guarantee to probabilistic claim
- Fix architecture diagram: add missing rebuild_corpus and reprime_corpus tools

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: enforce string[] type in safeParseJsonArray for corpus data integrity

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: add blank line before fenced code blocks in SKILL.md maintenance section

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-08 17:30:20 -07:00
Alex Newman 91e1d5baad fix: correct Gemini model name from gemini-3-flash to gemini-3-flash-preview
The Gemini API requires the -preview suffix for the Gemini 3 Flash model.
gemini-3-flash does not exist - only gemini-3-flash-preview is available.
This was causing 404 errors when users selected this model option.

Closes #831

Co-Authored-By: Glucksberg <markuscontasul@gmail.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-06 02:55:30 -05:00
Alex Newman 4df9f61347 refactor: implement in-process worker architecture for hooks (#722)
* fix: stop generating empty CLAUDE.md files

- Return empty string instead of "No recent activity" when no observations exist
- Skip writing CLAUDE.md files when formatted content is empty
- Remove redundant "auto-generated by claude-mem" HTML comment
- Clean up 98 existing empty CLAUDE.md files across the codebase
- Update tests to expect empty string for empty input

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build assets

* refactor: implement in-process worker architecture for hooks

Replaces spawn-based worker startup with in-process architecture:
- Hook processes now become the worker when port 37777 is free
- Eliminates Windows spawn issues (NO SPAWN rule)
- SessionStart chains: smart-install && stop && context

Key changes:
- worker-service.ts: hook case starts WorkerService in-process
- hook-command.ts: skipExit option prevents process.exit() when hosting worker
- hooks.json: single chained command replaces separate start/hook commands
- worker-utils.ts: ensureWorkerRunning() returns boolean, doesn't block
- handlers: graceful fallback when worker unavailable

All 761 tests pass. Manual verification confirms hook stays alive as worker.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* context

* a

* MAESTRO: Mark PR #722 test verification task complete

All 797 tests passed (3 skipped, 0 failed) after merge conflict resolution.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* MAESTRO: Mark PR #722 build verification task complete

* MAESTRO: Mark PR #722 code review task complete

Code review verified:
- worker-service.ts hook case starts WorkerService in-process
- hook-command.ts has skipExit option
- hooks.json uses single chained command
- worker-utils.ts ensureWorkerRunning() returns boolean

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* MAESTRO: Mark PR #722 conflict resolution push task complete

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-04 19:49:15 -05:00
Alex Newman a3d6bfc7dd feat: Update CLAUDE.md files with recent test activities and improvements
- Added detailed entries for test activities across various modules including `export-types.test.ts`, `server.test.ts`, `smart-install.test.ts`, and others.
- Documented significant changes in test coverage, cleanup efforts, and regression tests.
- Enhanced the `plans` documentation with recent implementation strategies and PR follow-ups.
- Introduced a comprehensive report on Windows platform challenges and solutions, detailing issues like zombie ports, console popups, and process management.
- Established a new `ProcessManager` architecture to address Windows-specific issues and improve reliability.
- Updated integration tests to reflect recent changes and ensure comprehensive coverage.
2026-01-07 16:53:02 -05:00
Alex Newman e1ab73decc feat: Live Context System with Distributed CLAUDE.md Generation (#556)
* docs: add folder index generator plan

RFC for auto-generating folder-level CLAUDE.md files with observation
timelines. Includes IDE symlink support and root CLAUDE.md integration.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: implement folder index generator (Phase 1)

Add automatic CLAUDE.md generation for folders containing observed files.
This enables IDE context providers to access relevant memory observations.

Core modules:
- FolderDiscovery: Extract folders from observation file paths
- FolderTimelineCompiler: Compile chronological timeline per folder
- ClaudeMdGenerator: Write CLAUDE.md with tag-based content replacement
- FolderIndexOrchestrator: Coordinate regeneration on observation save

Integration:
- Event-driven regeneration after observation save in ResponseProcessor
- HTTP endpoints for folder discovery, timeline, and manual generation
- Settings for enabling/configuring folder index behavior

The <claude-mem-context> tag wrapping ensures:
- Manual CLAUDE.md content is preserved
- Auto-generated content won't be recursively observed
- Clean separation between user and system content

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add updateFolderClaudeMd function to CursorHooksInstaller

Adds function to update CLAUDE.md files for folders touched by observations.
Uses existing /api/search/by-file endpoint, preserves content outside
<claude-mem-context> tags, and writes atomically via temp file + rename.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: hook updateFolderClaudeMd into ResponseProcessor

Calls updateFolderClaudeMd after observation save to update folder-level
CLAUDE.md files. Uses fire-and-forget pattern with error logging.
Extracts file paths from saved observations and workspace path from registry.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add timeline formatting for folder CLAUDE.md files

Implements formatTimelineForClaudeMd function that transforms API response
into compact markdown table format. Converts emojis to text labels,
handles ditto marks for timestamps, and groups under "Recent" header.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor: remove old folder-index implementation

Deletes redundant folder-index services that were replaced by the simpler
updateFolderClaudeMd approach in CursorHooksInstaller.ts.

Removed:
- src/services/folder-index/ directory (5 files)
- FolderIndexRoutes.ts
- folder-index settings from SettingsDefaultsManager
- folder-index route registration from worker-service

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add worktree-aware project filtering for unified timelines

Detect git worktrees and show both parent repo and worktree observations
in the session start timeline. When running in a worktree, the context
now includes observations from both projects, interleaved chronologically.

- Add detectWorktree() utility to identify worktree directories
- Add getProjectContext() to return parent + worktree projects
- Update context hook to pass multi-project queries
- Add queryObservationsMulti() and querySummariesMulti() for IN clauses
- Maintain backward compatibility with single-project queries

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com>

* fix: restructure logging to prove session correctness and reduce noise

Add critical logging at each stage of the session lifecycle to prove the session ID chain (contentSessionId → sessionDbId → memorySessionId) stays aligned. New logs include CREATED, ENQUEUED, CLAIMED, MEMORY_ID_CAPTURED, STORING, and STORED. Move intermediate migration and backfill progress logs to DEBUG level to reduce noise, keeping only essential initialization and completion logs at INFO level.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com>

* refactor: extract folder CLAUDE.md utils to shared location

Moves folder CLAUDE.md utilities from CursorHooksInstaller to a new
shared utils file. Removes Cursor registry dependency - file paths
from observations are already absolute, no workspace lookup needed.

New file: src/utils/claude-md-utils.ts
- replaceTaggedContent() - preserves user content outside tags
- writeClaudeMdToFolder() - atomic writes with tag preservation
- formatTimelineForClaudeMd() - API response to compact markdown
- updateFolderClaudeMdFiles() - orchestrates folder updates

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: trigger folder CLAUDE.md updates when observations are saved

The folder CLAUDE.md update was previously only triggered in
syncAndBroadcastSummary, but summaries run with observationCount=0
(observations are saved separately). Moved the update logic to
syncAndBroadcastObservations where file paths are available.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* all the claudes

* test: add unit tests for claude-md-utils pure functions

Add 11 tests covering replaceTaggedContent and formatTimelineForClaudeMd:
- replaceTaggedContent: empty content, tag replacement, appending, partial tags
- formatTimelineForClaudeMd: empty input, parsing, ditto marks, session IDs

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* test: add integration tests for file operation functions

Add 9 tests for writeClaudeMdToFolder and updateFolderClaudeMdFiles:
- writeClaudeMdToFolder: folder creation, content preservation, nested dirs, atomic writes
- updateFolderClaudeMdFiles: empty skip, fetch/write, deduplication, error handling

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* test: add unit tests for timeline-formatting utilities

Add 14 tests for extractFirstFile and groupByDate functions:
- extractFirstFile: relative paths, fallback to files_read, null handling, invalid JSON
- groupByDate: empty arrays, date grouping, chronological sorting, item preservation

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* chore: rebuild plugin scripts with merged features

* docs: add project-specific CLAUDE.md with architecture and development notes

* fix: exclude project root from auto-generated CLAUDE.md updates

Skip folders containing .git directory when auto-updating subfolder
CLAUDE.md files. This ensures:

1. Root CLAUDE.md remains user-managed and untouched by the system
2. SessionStart context injection stays pristine throughout the session
3. Subfolder CLAUDE.md files continue to receive live context updates
4. Cleaner separation between user-authored root docs and auto-generated folder indexes

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: prevent crash from resuming stale SDK sessions on worker restart

When the worker restarts, it was incorrectly passing the `resume` parameter
to INIT prompts (lastPromptNumber=1) when a memorySessionId existed from a
previous SDK session. This caused "Claude Code process exited with code 1"
crashes because the SDK tried to resume into a session that no longer exists.

Root cause: The resume condition only checked `hasRealMemorySessionId` but
did not verify that this was a CONTINUATION prompt (lastPromptNumber > 1).

Fix: Add `session.lastPromptNumber > 1` check to the resume condition:
- Before: `...(hasRealMemorySessionId && { resume: session.memorySessionId })`
- After: `...(hasRealMemorySessionId && session.lastPromptNumber > 1 && { resume: ... })`

Also added:
- Enhanced debug logging that warns when skipping resume for INIT prompts
- Unit tests in tests/sdk-agent-resume.test.ts (9 test cases)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: properly handle Chroma MCP connection errors

Previously, ensureCollection() caught ALL errors from chroma_get_collection_info
and assumed they meant "collection doesn't exist", triggering unnecessary
collection creation attempts. Connection errors like "Not connected" or
"MCP error -32000: Connection closed" would cascade into failed creation attempts.

Similarly, queryChroma() would silently return empty results when the MCP call
failed, masking the underlying connection problem.

Changes:
- ensureCollection(): Detect connection errors and re-throw immediately instead
  of attempting collection creation
- queryChroma(): Wrap MCP call in try-catch and throw connection errors instead
  of returning empty results
- Both methods reset connection state (connected=false, client=null) on
  connection errors so subsequent operations can attempt to reconnect

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* pushed

* fix: scope regenerate-claude-md.ts to current working directory

Critical bug fix: The script was querying ALL observations from the database
across ALL projects ever recorded (1396+ folders), then attempting to write
CLAUDE.md files everywhere including other projects, non-existent paths, and
ignored directories.

Changes:
- Use git ls-files to discover folders (respects .gitignore automatically)
- Filter database query to current project only (by folder name)
- Use relative paths for database queries (matches storage format)
- Add --clean flag to remove auto-generated CLAUDE.md files
- Add fallback directory walker for non-git repos

Now correctly scopes to 26 folders with observations instead of 1396+.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* docs and adjustments

* fix: cleanup mode strips tags instead of deleting files blindly

The cleanup mode was incorrectly deleting entire files that contained
<claude-mem-context> tags. The correct behavior (per original design):

1. Strip the <claude-mem-context>...</claude-mem-context> section
2. If empty after stripping → delete the file
3. If has remaining content → save the stripped version

Now properly preserves user content in CLAUDE.md files while removing
only the auto-generated sections.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* deleted some files

* chore: regenerate folder CLAUDE.md files with fixed script

Regenerated 23 folder CLAUDE.md files using the corrected script that:
- Scopes to current working directory only
- Uses git ls-files to respect .gitignore
- Filters by project name

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Update CLAUDE.md files for January 5, 2026

- Regenerated and staged 23 CLAUDE.md files with a mix of new and modified content.
- Fixed cleanup mode to properly strip tags instead of deleting files blindly.
- Cleaned up empty CLAUDE.md files from various directories, including ~/.claude and ~/Scripts.
- Conducted dry-run cleanup that identified a significant reduction in auto-generated CLAUDE.md files.
- Removed the isAutoGeneratedClaudeMd function due to incorrect file deletion behavior.

* feat: use settings for observation limit in batch regeneration script

Replace hard-coded limit of 10 with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS
setting (default: 50). This allows users to control how many observations appear
in folder CLAUDE.md files.

Changes:
- Import SettingsDefaultsManager and load settings at script startup
- Use OBSERVATION_LIMIT constant derived from settings at both call sites
- Remove stale default parameter from findObservationsByFolder function

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: use settings for observation limit in event-driven updates

Replace hard-coded limit of 10 in updateFolderClaudeMdFiles with
configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50).

Changes:
- Import SettingsDefaultsManager and os module
- Load settings at function start (once, not in loop)
- Use limit from settings in API call

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: Implement configurable observation limits and enhance search functionality

- Added configurable observation limits to batch regeneration scripts.
- Enhanced SearchManager to handle folder queries and normalize parameters.
- Introduced methods to check for direct child files in observations and sessions.
- Updated SearchOptions interface to include isFolder flag for filtering.
- Improved code quality with comprehensive reviews and anti-pattern checks.
- Cleaned up auto-generated CLAUDE.md files across various directories.
- Documented recent changes and improvements in CLAUDE.md files.

* build asset

* Project Context from Claude-Mem auto-added (can be auto removed at any time)

* CLAUDE.md updates

* fix: resolve CLAUDE.md files to correct directory in worktree setups

When using git worktrees, CLAUDE.md files were being written relative to
the worker's process.cwd() instead of the actual project directory. This
fix threads the project's cwd from message processing through to the file
writing utilities, ensuring CLAUDE.md files are created in the correct
project directory regardless of where the worker was started.

Changes:
- Add projectRoot parameter to updateFolderClaudeMdFiles for path resolution
- Thread projectRoot through ResponseProcessor call chain
- Track lastCwd from messages in SDKAgent, GeminiAgent, OpenRouterAgent
- Add tests for relative/absolute path handling with projectRoot

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* more project context updates

* context updates

* fix: preserve actual dates in folder CLAUDE.md generation

Previously, formatTimelineForClaudeMd used today's date for all
observations because the API only returned time (e.g., "4:30 PM")
without date information. This caused all historical observations
to appear as if they happened today.

Changes:
- SearchManager.findByFile now groups results by date with headers
  (e.g., "### Jan 4, 2026") matching formatSearchResults behavior
- formatTimelineForClaudeMd now parses these date headers and uses
  the correct date when constructing epochs for date grouping

The timeline dates are critical for claude-mem context - LLMs need
accurate temporal context to understand when work happened.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build: update worker assets with date parsing fix

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* claude-mem context: Fixed critical date parsing bug in PR #556

* fix: address PR #556 review items

- Use getWorkerHost() instead of hard-coded 127.0.0.1 in claude-md-utils
- Add error message and stack details to FOLDER_INDEX logging
- Add 5 new tests for worktree/projectRoot path resolution

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Refactor CLAUDE documentation across multiple components and tests

- Updated CLAUDE.md files in src/ui/viewer, src/ui/viewer/constants, src/ui/viewer/hooks, tests/server, tests/worker/agents, and plans to reflect recent changes and improvements.
- Removed outdated entries and consolidated recent activities for clarity.
- Enhanced documentation for hooks, settings, and pagination implementations.
- Streamlined test suite documentation for server and worker agents, indicating recent test audits and cleanup efforts.
- Adjusted plans to remove obsolete entries and focus on current implementation strategies.

* docs: comprehensive v9.0 documentation audit and updates

- Add usage/folder-context to docs.json navigation (was documented but hidden!)
- Update introduction.mdx with v9.0 release notes (Live Context, Worktree Support, Windows Fixes)
- Add CLAUDE_MEM_WORKER_HOST setting to configuration.mdx
- Add Folder Context Files section with link to detailed docs
- Document worktree support in folder-context.mdx
- Update terminology from "mem-search skill" to "MCP tools" throughout active docs
- Update Search Pipeline in architecture/overview.mdx
- Update usage/getting-started.mdx with MCP tools terminology
- Update usage/claude-desktop.mdx title and terminology
- Update hooks-architecture.mdx reference

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add recent activity log for worker CLI with detailed entries

* chore: update CLAUDE.md context files

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add brainstorming report for CLAUDE.md distribution architecture

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-05 22:41:42 -05:00
Alex Newman 9f1498ed24 refactor(docs): Update links in setup guides for consistency and clarity 2025-12-29 23:06:50 -05:00
Alex Newman 00d0bc51e0 Refactor search documentation to implement a 3-layer workflow for memory retrieval; update tool names and usage examples for clarity and efficiency. Enhance troubleshooting section with new error handling and token management strategies. 2025-12-29 00:26:06 -05:00
Alex Newman f1aa4c3943 fix: wrap migration 17 in transaction and update docs
- Add BEGIN/COMMIT/ROLLBACK to session ID column rename migration
- Update claude-desktop.mdx to reflect streamlined MCP tools
- Remove obsolete skill zip download instructions

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-28 23:43:34 -05:00
Alex Newman d7c183b3e1 fix: rename 'mem-search' to 'mcp-search' for consistency across documentation and configuration 2025-12-28 22:55:05 -05:00
Alex Newman 6f6cdf221b fix: update restart command from 'claude-mem restart' to 'npm run worker:restart' in documentation and scripts 2025-12-27 16:32:02 -05:00
Alex Newman 69cd734b53 feat: Add OpenRouter provider settings and documentation 2025-12-26 22:21:14 -05:00
Alex Newman 8364af1e48 feat(gemini): update Gemini model to 2.5 versions and add billing toggle in settings 2025-12-25 19:47:41 -05:00
Alex Newman 7827226ed6 feat(gemini): update Gemini model types and implement rate limiting for free tier
- Changed Gemini model types to 'gemini-2.5-flash-lite', 'gemini-2.5-flash', and 'gemini-3-flash'.
- Introduced RPM limits for free tier models with a maximum of 10 RPM for 'gemini-2.5-flash-lite' and 5 RPM for the others.
- Added rate limiting enforcement in the GeminiAgent class, which waits based on the model's RPM limit.
- Updated getGeminiConfig to include billingEnabled setting, allowing users to skip rate limiting if billing is enabled.
- Modified ContextSettingsModal to reflect new model options and added a toggle for enabling billing.
- Updated default settings to use the new model and billing configuration.
2025-12-25 19:30:46 -05:00
Alex Newman 954157e9e0 docs: add Gemini provider documentation
- New usage/gemini-provider.mdx with setup guide and free tier info
- Add Gemini settings to configuration.mdx
- Remove obsolete cleanup-hook.js references from docs

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-25 18:51:07 -05:00
Alex Newman 266c746d50 feat: Fix observation timestamps, refactor session management, and enhance worker reliability (#437)
* Refactor worker version checks and increase timeout settings

- Updated the default hook timeout from 5000ms to 120000ms for improved stability.
- Modified the worker version check to log a warning instead of restarting the worker on version mismatch.
- Removed legacy PM2 cleanup and worker start logic, simplifying the ensureWorkerRunning function.
- Enhanced polling mechanism for worker readiness with increased retries and reduced interval.

* feat: implement worker queue polling to ensure processing completion before proceeding

* refactor: change worker command from start to restart in hooks configuration

* refactor: remove session management complexity

- Simplify createSDKSession to pure INSERT OR IGNORE
- Remove auto-create logic from storeObservation/storeSummary
- Delete 11 unused session management methods
- Derive prompt_number from user_prompts count
- Keep sdk_sessions table schema unchanged for compatibility

* refactor: simplify session management by removing unused methods and auto-creation logic

* Refactor session prompt number retrieval in SessionRoutes

- Updated the method of obtaining the prompt number from the session.
- Replaced `store.getPromptCounter(sessionDbId)` with `store.getPromptNumberFromUserPrompts(claudeSessionId)` for better clarity and accuracy.
- Adjusted the logic for incrementing the prompt number to derive it from the user prompts count instead of directly incrementing a counter.

* refactor: replace getPromptCounter with getPromptNumberFromUserPrompts in SessionManager

Phase 7 of session management simplification. Updates SessionManager to derive
prompt numbers from user_prompts table count instead of using the deprecated
prompt_counter column.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: simplify SessionCompletionHandler to use direct SQL query

Phase 8: Remove call to findActiveSDKSession() and replace with direct
database query in SessionCompletionHandler.completeByClaudeId().

This removes dependency on the deleted findActiveSDKSession() method
and simplifies the code by using a straightforward SELECT query.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: remove markSessionCompleted call from SDKAgent

- Delete call to markSessionCompleted() in SDKAgent.ts
- Session status is no longer tracked or updated
- Part of phase 9: simplifying session management

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: remove markSessionComplete method (Phase 10)

- Deleted markSessionComplete() method from DatabaseManager
- Removed markSessionComplete call from SessionCompletionHandler
- Session completion status no longer tracked in database
- Part of session management simplification effort

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: replace deleted updateSDKSessionId calls in import script (Phase 11)

- Replace updateSDKSessionId() calls with direct SQL UPDATE statements
- Method was deleted in Phase 3 as part of session management simplification
- Import script now uses direct database access consistently

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* test: add validation for SQL updates in sdk_sessions table

* refactor: enhance worker-cli to support manual and automated runs

* Remove cleanup hook and associated session completion logic

- Deleted the cleanup-hook implementation from the hooks directory.
- Removed the session completion endpoint that was used by the cleanup hook.
- Updated the SessionCompletionHandler to eliminate the completeByClaudeId method and its dependencies.
- Adjusted the SessionRoutes to reflect the removal of the session completion route.

* fix: update worker-cli command to use bun for consistency

* feat: Implement timestamp fix for observations and enhance processing logic

- Added `earliestPendingTimestamp` to `ActiveSession` to track the original timestamp of the earliest pending message.
- Updated `SDKAgent` to capture and utilize the earliest pending timestamp during response processing.
- Modified `SessionManager` to track the earliest timestamp when yielding messages.
- Created scripts for fixing corrupted timestamps, validating fixes, and investigating timestamp issues.
- Verified that all corrupted observations have been repaired and logic for future processing is sound.
- Ensured orphan processing can be safely re-enabled after validation.

* feat: Enhance SessionStore to support custom database paths and add timestamp fields for observations and summaries

* Refactor pending queue processing and add management endpoints

- Disabled automatic recovery of orphaned queues on startup; users must now use the new /api/pending-queue/process endpoint.
- Updated processOrphanedQueues method to processPendingQueues with improved session handling and return detailed results.
- Added new API endpoints for managing pending queues: GET /api/pending-queue and POST /api/pending-queue/process.
- Introduced a new script (check-pending-queue.ts) for checking and processing pending observation queues interactively or automatically.
- Enhanced logging and error handling for better monitoring of session processing.

* updated agent sdk

* feat: Add manual recovery guide and queue management endpoints to documentation

---------

Co-authored-by: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-25 15:36:46 -05:00
Alex Newman 5ce656037e Refactor worker commands from npm scripts to claude-mem CLI
- Updated all instances of `npm run worker:restart` to `claude-mem restart` in documentation and code comments for consistency.
- Modified error messages and logging to reflect the new command structure.
- Adjusted worker management commands in various troubleshooting documents.
- Changed the worker status check message to guide users towards the new command.
2025-12-20 17:16:20 -05:00
Alex Newman 660c523ba4 fix: shorten MCP server name to prevent tool name length errors (#360)
* fix: shorten MCP server name to prevent tool name length errors (#358)

Root cause: Claude Code prefixes MCP tool names with
`mcp__plugin_{plugin-name}_{server-name}__` which was 43 chars
for `mcp__plugin_claude-mem_claude-mem-search__`. Combined with
`progressive_description` (22 chars) this exceeded the 64 char limit.

Changes:
- Shortened MCP server name from 'claude-mem-search' to 'mem-search'
  (saves 8 chars, new prefix is 35 chars)
- Renamed `progressive_description` tool to `help` (saves 18 chars)
- Updated SKILL.md to reference new `help` tool name
- Updated internal Server constructor name for consistency

All tool names now safely under 64 char limit:
- Longest is now `get_batch_observations` at 56 chars total
- `help` is only 39 chars total

Fixes #358

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: rename get_batch_observations to get_observations

The plural form naturally implies multiple items can be fetched,
following WordPress conventions. Simpler and clearer naming.

Also saves 6 additional characters for MCP tool name length.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* docs: update all references to renamed MCP tools

Updated documentation and code comments to reflect:
- progressive_description → help
- get_batch_observations → get_observations

Files updated:
- docs/public/usage/claude-desktop.mdx
- docs/public/architecture/worker-service.mdx
- src/services/worker/FormattingService.ts

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-16 22:06:24 -05:00
Alex Newman 32be34505a refactor: consolidate mem-search skill, remove desktop-skill duplication
- Delete separate desktop-skill/ directory (was outdated)
- Generate mem-search.zip during build from plugin/skills/mem-search/
- Update docs with correct MCP tool list and new download path
- Single source of truth for Claude Desktop skill

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-14 22:55:09 -05:00
Alex Newman 61488042d8 Mem-search enhancements: table output, simplified API, Sonnet default, and removed fake URIs (#317)
* feat: Add batch fetching for observations and update documentation

- Implemented a new endpoint for fetching multiple observations by IDs in a single request.
- Updated the DataRoutes to include a POST /api/observations/batch endpoint.
- Enhanced SKILL.md documentation to reflect changes in the search process and batch fetching capabilities.
- Increased the default limit for search results from 5 to 40 for better usability.

* feat!: Fix timeline parameter passing with SearchManager alignment

BREAKING CHANGE: Timeline MCP tools now use standardized parameter names
- anchor_id → anchor
- before → depth_before
- after → depth_after
- obs_type → type (timeline tool only)

Fixes timeline endpoint failures caused by parameter name mismatch between
MCP layer and SearchManager. Adds new SessionStore methods for fetching
prompts and session summaries by ID.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* docs: reframe timeline parameter fix as bug fix, not breaking change

The timeline tools were completely broken due to parameter name mismatch.
There's nothing to migrate from since the old parameters never worked.

Co-authored-by: Alex Newman <thedotmack@users.noreply.github.com>

* Refactor mem-search documentation and optimize API tool definitions

- Updated SKILL.md to emphasize batch fetching for observations, clarifying usage and efficiency.
- Removed deprecated tools from mcp-server.ts and streamlined tool definitions for clarity.
- Enhanced formatting in FormattingService.ts for better output readability.
- Adjusted SearchManager.ts to improve result headers and removed unnecessary search tips from combined text.

* Refactor FormattingService and SearchManager for table-based output

- Updated FormattingService to format search results as tables, including methods for formatting observations, sessions, and user prompts.
- Removed JSON format handling from SearchManager and streamlined result formatting to consistently use table format.
- Enhanced readability and consistency in search tips and formatting logic.
- Introduced token estimation for observations and improved time formatting.

* refactor: update documentation and API references for version bump and search functionalities

* Refactor code structure for improved readability and maintainability

* chore: change default model from haiku to sonnet

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: unify timeline formatting across search and context services

Extract shared timeline formatting utilities into reusable module to align
MCP search output format with context-generator's date/file-grouped format.

Changes:
- Create src/shared/timeline-formatting.ts with reusable utilities
  (parseJsonArray, formatDateTime, formatTime, formatDate, toRelativePath,
  extractFirstFile, groupByDate)
- Refactor context-generator.ts to use shared utilities
- Update SearchManager.search() to use date/file grouping
- Add search-specific row formatters to FormattingService
- Fix timeline methods to extract actual file paths from metadata
  instead of hardcoding 'General'
- Remove Work column from search output (kept in context output)

Result: Consistent date/file-grouped markdown formatting across both
systems while maintaining their different column requirements.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: remove redundant legend from search output

Remove legend from search/timeline results since it's already shown
in SessionStart context. Saves ~30 tokens per search result.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* Refactor session summary rendering to remove links

- Removed link generation for session summaries in context generation and search manager.
- Updated output formatting to exclude links while maintaining the session summary structure.
- Adjusted related components in TimelineService to ensure consistency across the application.

* fix: move skillPath declaration outside try block to fix scoping bug

The skillPath variable was declared inside the try block but referenced
in the catch block for error logging. Since const is block-scoped, this
would cause a ReferenceError when the error handler executes.

Moved skillPath declaration before the try block so it's accessible in
both try and catch scopes.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix: address PR #317 code review feedback

**Critical Fixes:**
- Replace happy_path_error__with_fallback debug calls with proper logger methods in mcp-server.ts
- All HTTP API calls now use logger.debug/error for consistent logging

**Code Quality Improvements:**
- Extract 90-day recency window magic numbers to named constants
- Added RECENCY_WINDOW_DAYS and RECENCY_WINDOW_MS constants in SearchManager

**Documentation:**
- Document model cost implications of Haiku → Sonnet upgrade in CHANGELOG
- Provide clear migration path for users who want to revert to Haiku

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* refactor: simplify CHANGELOG - remove cost documentation

Removed model cost comparison documentation per user feedback.
Kept only the technical code quality improvements.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.5 <noreply@anthropic.com>
Co-authored-by: claude[bot] <41898282+claude[bot]@users.noreply.github.com>
Co-authored-by: Alex Newman <thedotmack@users.noreply.github.com>
2025-12-14 21:58:11 -05:00
Alex Newman a0b4381dc8 Merge feature/import-export: Add memory export/import scripts with duplicate prevention 2025-12-13 17:53:18 -05:00
Alex Newman 901af0b7f7 docs: update metadata and descriptions across multiple documentation files 2025-12-12 21:47:58 -05:00
Alex Newman 1491123706 feat(ProcessManager): add Bun availability check and improve PID file validation
- Implemented a method to check if Bun is available in the system PATH.
- Updated the startWithBun method to return an error if Bun is not found.
- Enhanced PID file parsing to validate required fields and their types.
- Cleaned up stale PID files if the process is no longer alive.

fix(SettingsRoutes): clear port cache after updating settings

- Added a call to clearPortCache after writing updated settings to ensure the application uses the latest configuration.
2025-12-12 17:48:41 -05:00
Alex Newman f154e32145 feat: add mem-search skill and Claude Desktop integration documentation 2025-12-12 00:09:25 -05:00
Alex Newman 5b338ba34e Fix project filter and update export/import docs
Critical bug fix:
- Pass project filter to getSessionSummariesByIds() and getUserPromptsByIds() in SearchManager
- Previously only observations were filtered by project, sessions and prompts leaked from other projects

Documentation improvements:
- Update "FTS5 search" to "hybrid search" (accurate terminology)
- Add privacy warning about sensitive data in exports
- Document --project parameter for filtered exports
- Add "Export by Project" examples to advanced usage

Verified with test export using --project=claude-mem filter.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-10 20:38:21 -05:00
Alex Newman fa93f2c1e2 Add export/import functionality and documentation for memory management 2025-12-10 17:39:55 -05:00
Alex Newman 9a27f380c3 docs: lint and publish platform integration guide
- Fix MDX parsing error in search-architecture.mdx (line 382: changed <10ms to "under 10ms")
- Fix broken internal links:
  - architecture-evolution.mdx: VIEWER → /architecture/worker-service
  - usage/private-tags.mdx: search-tools → /usage/search-tools
  - usage/private-tags.mdx: getting-started → /usage/getting-started
- Verify all links pass mintlify broken-links check
- Confirm platform-integration.mdx renders correctly

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-08 22:40:34 -05:00
Alex Newman 2b223b7cd9 feat: Add dual-tag system for meta-observation control (#153)
* feat: Add dual-tag system for meta-observation control

Implements <private> and <claude-mem-context> tag stripping at hook layer
to give users fine-grained control over what gets persisted in observations
and enable future real-time context injection without recursive storage.

**Features:**
- stripMemoryTags() function in save-hook.ts
- Strips both <private> and <claude-mem-context> tags before sending to worker
- Always active (no configuration needed)
- Comprehensive test suite (19 tests, all passing)
- User documentation for <private> tag
- Technical architecture documentation

**Architecture:**
- Edge processing pattern (filter at hook, not worker)
- Defensive type handling with silentDebug
- Supports multiline, nested, and multiple tags
- Enables strategic orchestration for internal tools

**User-Facing:**
- <private> tag for manual privacy control (documented)
- Prevents sensitive data from persisting in observations

**Infrastructure:**
- <claude-mem-context> tag ready for real-time context feature
- Prevents recursive storage when context injection ships

**Files:**
- src/hooks/save-hook.ts: Core implementation
- tests/strip-memory-tags.test.ts: Test suite (19/19 passing)
- docs/public/usage/private-tags.mdx: User guide
- docs/public/docs.json: Navigation update
- docs/context/dual-tag-system-architecture.md: Technical docs
- plugin/scripts/save-hook.js: Built hook

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* fix: Strip private tags from user prompts and skip memory ops for fully private prompts

Fixes critical privacy bug where <private> tags were not being stripped from
user prompts before storage in user_prompts table, making private content
searchable via mem-search.

Changes:

1. new-hook.ts: Skip memory operations for fully private prompts
   - If cleaned prompt is empty after stripping tags, skip saveUserPrompt
   - Skip worker init to avoid wasting resources on empty prompts
   - Logs: "(fully private - skipped)"

2. save-hook.ts: Skip observations for fully private prompts
   - Check if user prompt was entirely private before creating observations
   - Respects user intent: fully private prompt = no observations at all
   - Prevents "thoughts pop up" issue where private prompts create public observations

3. SessionStore.ts: Add getUserPrompt() method
   - Retrieves prompt text by session_id and prompt_number
   - Used by save-hook to check if prompt was private

4. Tests: Added 4 new tests for fully private prompt detection (16 total, all passing)

5. Docs: Updated private-tags.mdx to reflect correct behavior
   - User prompts ARE now filtered before storage
   - Private content never reaches database or search indices

Privacy Protection:
- Fully private prompts: No user_prompt saved, no worker init, no observations
- Partially private prompts: Tags stripped, content sanitized before storage
- Zero leaks: Private content never indexed or searchable

Addresses reviewer feedback on PR #153 about user prompt filtering.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* feat: Enhance memory tag handling and indexing in user prompts

- Added a new index `idx_user_prompts_lookup` on `user_prompts` for improved query performance based on `claude_session_id` and `prompt_number`.
- Refactored memory tag stripping functionality into dedicated utility functions: `stripMemoryTagsFromJson` and `stripMemoryTagsFromPrompt` for better separation of concerns and reusability.
- Updated hooks (`new-hook.ts` and `save-hook.ts`) to utilize the new tag stripping functions, ensuring private content is not stored or searchable.
- Removed redundant inline tag stripping functions from hooks to streamline code.
- Added tests for the new tag stripping utilities to ensure functionality and prevent regressions.

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Co-authored-by: Claude <noreply@anthropic.com>
2025-11-30 22:57:26 -05:00
Copilot 7bdf6dbfe1 Align user-facing documentation with v5.5.1 codebase state (#99)
* Initial plan

* Update documentation to reflect v5.5.1 state and mem-search skill

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

* Update hooks documentation to clarify 6 hooks + pre-hook architecture

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

* Complete documentation alignment with mem-search skill naming

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

* Fix remaining old skill path references in troubleshooting docs

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

* Documentation alignment complete - all tests pass

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

* Fix hallucinated /skill command references - skills are auto-invoked

Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>

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Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com>
Co-authored-by: thedotmack <683968+thedotmack@users.noreply.github.com>
2025-11-12 14:59:04 -05:00
basher83 97d565e3cd Replace search skill with mem-search (#91)
* feat: add mem-search skill with progressive disclosure architecture

Add comprehensive mem-search skill for accessing claude-mem's persistent
cross-session memory database. Implements progressive disclosure workflow
and token-efficient search patterns.

Features:
- 12 search operations (observations, sessions, prompts, by-type, by-concept, by-file, timelines, etc.)
- Progressive disclosure principles to minimize token usage
- Anti-patterns documentation to guide LLM behavior
- HTTP API integration for all search functionality
- Common workflows with composition examples

Structure:
- SKILL.md: Entry point with temporal trigger patterns
- principles/: Progressive disclosure + anti-patterns
- operations/: 12 search operation files

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* docs: add CHANGELOG entry for mem-search skill

Document mem-search skill addition in Unreleased section with:
- 100% effectiveness compliance metrics
- Comparison to previous search skill implementation
- Progressive disclosure architecture details
- Reference to audit report documentation

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* docs: add mem-search skill audit report

Add comprehensive audit report validating mem-search skill against
Anthropic's official skill-creator documentation.

Report includes:
- Effectiveness metrics comparison (search vs mem-search)
- Critical issues analysis for production readiness
- Compliance validation across 6 key dimensions
- Reference implementation guidance

Result: mem-search achieves 100% compliance vs search's 67%

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* feat: Add comprehensive search architecture analysis document

- Document current state of dual search architectures (HTTP API and MCP)
- Analyze HTTP endpoints and MCP search server architectures
- Identify DRY violations across search implementations
- Evaluate the use of curl as the optimal approach for search
- Provide architectural recommendations for immediate and long-term improvements
- Outline action plan for cleanup, feature parity, DRY refactoring

* refactor: Remove deprecated search skill documentation and operations

* refactor: Reorganize documentation into public and context directories

Changes:
- Created docs/public/ for Mintlify documentation (.mdx files)
- Created docs/context/ for internal planning and implementation docs
- Moved all .mdx files and assets to docs/public/
- Moved all internal .md files to docs/context/
- Added CLAUDE.md to both directories explaining their purpose
- Updated docs.json paths to work with new structure

Benefits:
- Clear separation between user-facing and internal documentation
- Easier to maintain Mintlify docs in dedicated directory
- Internal context files organized separately

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* Enhance session management and continuity in hooks

- Updated new-hook.ts to clarify session_id threading and idempotent session creation.
- Modified prompts.ts to require claudeSessionId for continuation prompts, ensuring session context is maintained.
- Improved SessionStore.ts documentation on createSDKSession to emphasize idempotent behavior and session connection.
- Refined SDKAgent.ts to detail continuation prompt logic and its reliance on session.claudeSessionId for unified session handling.

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Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: Alex Newman <thedotmack@gmail.com>
2025-11-11 16:15:07 -05:00