3d1dfcc26a0d65e98285cfe09a7672dee6ed3724
121 Commits
| Author | SHA1 | Message | Date | |
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 Alex Newman
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3d1dfcc26a |
feat(migration): add merged_into_project column for worktree adoption
Nullable pointer on observations and session_summaries that lets a worktree's rows surface under the parent project's observation list without data movement. Self-idempotent via PRAGMA table_info guard; does not bump schema_versions. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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9d695f53ed |
chore: remove auto-generated per-directory CLAUDE.md files
Leftover artifacts from an abandoned context-injection feature. The project-level CLAUDE.md stays; the directory-level ones were generated timeline scaffolding that never panned out. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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a65ab055ca |
fix(worktree): audit observation fetch/display for composite project names
Three sites didn't account for parent/worktree composite naming: - PaginationHelper.stripProjectPath: marker used full composite, breaking path sanitization for worktrees checked out outside a parent/leaf layout. Now extracts the leaf segment. - observations/store.ts: fallback imported getCurrentProjectName from shared/paths.ts (a duplicate impl without worktree detection). Switched to getProjectContext().primary so writes key into the same project as reads. - SearchManager.getRecentContext: fallback used basename(cwd) and lost the parent prefix, making the MCP tool find nothing in worktrees. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Jochen Meyer
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59ce0fc553 |
fix: exclude primary key index from unique constraint check in migration 7 (#1771)
* fix: exclude primary key index from unique constraint check in migration 7 PRAGMA index_list returns all indexes including those backing PRIMARY KEY columns (origin='pk'), which always have unique=1. The check was therefore always true, causing migration 7 to run the full DROP/CREATE/RENAME table sequence on every worker startup instead of short-circuiting once the UNIQUE constraint had already been removed. Fix: filter to non-PK indexes by requiring idx.origin !== 'pk'. The origin field is already present on the existing IndexInfo interface. Fixes #1749 * fix: apply pk-origin guard to all three migration code paths CodeRabbit correctly identified that the origin !== 'pk' fix was only applied to MigrationRunner.ts but not to the two other active code paths that run the same removeSessionSummariesUniqueConstraint logic: - SessionStore.ts:220 — used by DatabaseManager and worker-service - plugin/scripts/context-generator.cjs — bundled artifact (minified) All three paths now consistently exclude primary-key indexes when detecting unique constraints on session_summaries. |
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Octopus
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f7fd2221c8 |
fix: rebuild FTS5 index after bulk observation import (fixes #1631) (#1632)
Imported observations were invisible to the MCP search tool because the FTS5 content table was not reliably updated during bulk import. The import handler now calls rebuildObservationsFTSIndex() after inserting new observations, ensuring the full-text search index is consistent. A new SessionStore.rebuildObservationsFTSIndex() method encapsulates the FTS5 rebuild command and is a no-op when the observations_fts table does not exist (e.g. FTS5 unavailable on Windows). |
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Alex Newman
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753a993647 |
fix: address PR #1641 review comments (round 3)
- Fix migration version conflict: addSessionPlatformSourceColumn now uses v25 - Sanitize observation titles in file-context deny reason (strip newlines, limit length) - Guard json_each() with LIKE '[%' check for legacy bare-path rows - Guard /stream SSE endpoint with 503 before DB initialization - Scope bun-runner signal exit handling to start subcommand only - Normalize platformSource at route boundary in DataRoutes Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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25bb93a995 |
fix: address PR #1641 review comments (round 2)
- Remove duplicate TranscriptWatcher/config imports in worker-service.ts - Use normalizePlatformSource in handleSessionInitByClaudeId for consistency - Don't skip DB completion when session not in memory (completeByClaudeId) - Add try-catch around fetch in useContextPreview refresh callback - Deduplicate store.getAllProjects() call in DataRoutes - Fix malformed comment separators in migration runner - Fix missing closing brace and JSDoc opener (merge artifact) in migration runner Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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c21e49d9fa |
fix: address PR review comments and add file read gate docs
Fix indentation bugs flagged in PR review (SettingsDefaultsManager, MigrationRunner), add current date/time to file read gate timeline so the model can judge observation recency, and add documentation for the file read gate feature. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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cbb68ad9e1 |
fix: worker startup crash and missing observation columns
Two bugs fixed: 1. SessionCompletionHandler called dbManager.getSessionStore() during WorkerService construction, before DB initialization. Changed to accept DatabaseManager and defer the call to runtime. 2. migration009 (generated_by_model, relevance_count columns) only ran via the deprecated MigrationRunner path, never through SessionStore's migration chain. Added addObservationModelColumns() to SessionStore constructor. Checks column existence directly since schema_versions may have been marked applied without the ALTER TABLE succeeding. Also removed duplicate transcriptWatcher declaration and shutdown block (merge artifact). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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b8999c1181 | Merge branch 'thedotmack/file-read-timeline-inject' into integration/validation-batch | ||
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Alex Newman
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e3475180cd |
fix: address PR review — day sort, path canonicalization, dead code cleanup
- Sort within-day observations chronologically (was specificity-ordered) - Canonicalize relative paths to POSIX format before DB lookup - Skip projects param when allProjects is empty (prevents cross-project leaks) - Remove dead stderrMessage field and hook-command block (unused after permissionDecision switch) - Type permissionDecision as 'allow' | 'deny' union instead of string - Remove redundant non-null assertions in getObservationsByFilePath - Add edit guidance to deny message (use sed via Bash with smart tools) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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31910fb265 |
fix: address PR review feedback — path safety, SQL injection, gate scoping
- Resolve relative filePath against input.cwd before statSync; early-return on ENOENT - Replace LIKE '%path%' with exact json_each equality to prevent false matches - Sanitize and parameterize LIMIT to prevent NaN SQL errors - Fix day-sorting to use earliest epoch in group, not first (specificity-sorted) item - Use exact path equality in deduplicateObservations instead of substring includes - Scope FileReadGate by session+cwd to prevent worktree collisions - Refresh lastAccess TTL on active sessions; throttle prune to every 50 calls - Type params as (string | number)[] instead of any[] - Remove unused permissionDecision fields from HookResult Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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6250a194dd |
Merge branch 'pr-1472' into integration/validation-batch
# Conflicts: # plugin/scripts/context-generator.cjs # plugin/scripts/mcp-server.cjs # plugin/scripts/worker-service.cjs # plugin/ui/viewer-bundle.js # src/cli/handlers/context.ts # src/services/sqlite/SessionStore.ts # src/services/sqlite/migrations/runner.ts # src/services/worker-service.ts # src/shared/SettingsDefaultsManager.ts |
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Alex Newman
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5dd2a6f758 |
Merge branch 'pr-1553' into integration/validation-batch
# Conflicts: # src/services/worker/session/SessionCompletionHandler.ts |
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Alex Newman
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5a52121216 | Merge branch 'pr-1602' into integration/validation-batch | ||
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Alex Newman
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85f57e6440 | Merge branch 'pr-1554' into integration/validation-batch | ||
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Alex Newman
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f32fda8b35 | Merge branch 'pr-1494' into integration/validation-batch | ||
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Alex Newman
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a60f79c44d |
feat: file-size threshold and observation dedup for timeline gate
- Skip gate for files under 1,500 bytes — timeline (~370 tokens) costs more than just reading small files directly - Deduplicate observations by memory_session_id (one per session) - Rank by specificity: files_modified > files_read, fewer tagged files > many - Fetch 40 candidates, dedup/score down to 15 for display - Reduce default by-file query limit from 30 to 15 Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alessandro Costa
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5e696888d6 |
fix: add migration for generated_by_model and relevance_count columns
The compiled binary (v10.6.3) creates these columns at runtime via MigrationRunner, but no corresponding migration exists in the TypeScript source. Anyone building from source gets observations without these columns, breaking the feedback pipeline and model tracking. This migration conditionally adds both columns using PRAGMA table_info checks, making it safe for databases that already have them. Refs: #1626 Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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2b8fbcf50e |
Merge main into thedotmack/file-read-timeline-inject
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alessandro Costa
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c3e5f3a79e |
fix: wire generated_by_model into observation write path
The generated_by_model column was added to the observations table in the Phase 0 governance schema migration but never wired into the INSERT statements. All 3,878+ observations in production have this field NULL. This fix threads the model ID from each agent (SDKAgent, GeminiAgent, OpenRouterAgent) through processAgentResponse() into storeObservation(), storeObservations(), and storeObservationsAndMarkComplete(). Unblocks Thompson Sampling RFC (#1571) which needs {obs_type}:{model} as the bandit arm key. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alessandro Costa
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42cc863bf2 |
fix: address CodeRabbit review on PR #1569
Critical: - migrations: change version 8 → 25 to avoid collision with MigrationRunner.addObservationHierarchicalFields (uses version 8) - SessionRoutes: remove duplicate imports that prevent compilation Major: - SessionRoutes: call applyTierRouting() before every generator spawn (stale-recovery and crash-recovery paths were missing it) - applyTierRouting: clear session.modelOverride at top before re-evaluating to prevent stale tier from persisting across spawns Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alessandro Costa
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0fcc078873 |
feat: tier routing by queue complexity + observation feedback table
Tier Routing: - Inspect pending queue before starting generator - Summarize messages → CLAUDE_MEM_TIER_SUMMARY_MODEL (e.g., Opus) - All simple tools (Read, Glob, Grep, LS) → CLAUDE_MEM_TIER_SIMPLE_MODEL (Haiku) - Mixed/complex → default model (no override) - session.modelOverride in ActiveSession, used by SDKAgent.getModelId() - peekPendingTypes() in PendingMessageStore for non-claiming inspection - Configurable via CLAUDE_MEM_TIER_ROUTING_ENABLED (default: true) Feedback Collection (schema only): - New observation_feedback table via MigrationRunner (schema version 24) - Tracks signal_type (semantic_inject_hit, search_accessed, etc.) - Indexes on observation_id and signal_type - Foundation for future Thompson Sampling optimization Production data (24h tier routing test): - 36 Haiku observations in 4 min, quality indistinguishable from Sonnet - Estimated ~52% cost reduction on SDK Agent usage - 835 → 6,695 feedback signals collected over 13 days Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Ousama Ben Younes
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2a304d59eb |
fix: handle bare path strings in files_modified/files_read columns (#1359)
JSON.parse('/path/to/file') throws SyntaxError, crashing the viewer and
any code reading observations with legacy bare-path data in those columns.
- Add parseFileList() helper in observations/files.ts — tries JSON.parse,
falls back to wrapping bare strings in an array
- Replace unsafe JSON.parse calls in files.ts, SessionStore.ts, ChromaSync.ts
- Add 9 unit tests covering null, empty, valid JSON, bare paths, invalid JSON
Closes #1359
Co-Authored-By: Claude <noreply@anthropic.com>
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Ousama Ben Younes
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12501412b9 |
fix: persist session completion to database in completeByDbId (#1532)
completeByDbId only cleaned up in-memory state, leaving sdk_sessions rows with status='active' and completed_at=NULL indefinitely. Ghost sessions accumulated and exhausted the agent pool, causing 60s timeout errors. - Add SessionStore.markSessionCompleted() to set status/completed_at/completed_at_epoch - Call it at the start of completeByDbId before in-memory cleanup - Inject SessionStore into SessionCompletionHandler via constructor - Add 4 tests covering status, timestamps, isolation, and non-existent IDs Closes #1532 Co-Authored-By: Claude <noreply@anthropic.com> |
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79475432@qq.com
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9cfa57d498 |
fix: use null-byte delimiter in observation content hash to prevent collisions
Fields concatenated without separators allowed different tuples to produce identical hashes (e.g. session="ab", title="cd" vs session="abc", title="d"). This could cause legitimate observations to be silently deduplicated. Join with \x00 so field boundaries are unambiguous. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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huakson
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4f6fb9e614 |
fix: address platform source review feedback
Tighten platform source persistence so legacy callers cannot silently relabel existing sessions, repair migration 24 when schema_versions drifts from the real schema, and polish the follow-up UI/error-handler review nits. - only backfill platform_source when it is blank and raise on explicit source conflicts for an existing session - make migration 24 verify both the sdk_sessions column and its index before treating it as applied - expose platform_source from the functional session getters and add regression tests for source preservation and schema drift recovery - add the required APPROVED OVERRIDE annotation for centralized HTTP error translation - keep mobile source pills on a single horizontal row |
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huakson
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2b60dd2932 |
feat: isolate Claude and Codex session sources
Persist platform_source across session creation, transcript ingestion, API query paths, and viewer state so Claude and Codex data can coexist without bleeding into each other. - add platform-source normalization helpers and persist platform_source in sdk_sessions via migration 24 with backfill and indexing - thread platformSource through CLI hooks, transcript processing, context generation, pagination, search routes, SSE payloads, and session management - expose source-aware project catalogs, viewer tabs, context preview selectors, and source badges for observations, prompts, and summaries - start the transcript watcher from the worker for transcript-based clients and preserve platform source during Codex ingestion - auto-start the worker from the MCP server for MCP-only clients and tighten stdio-driven cleanup during shutdown - keep createSDKSession backward compatible with existing custom-title callers while allowing explicit platform source forwarding |
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Alex Newman
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e07b13f7de |
fix: proper project isolation and relative path matching for file-context hook
- Use getProjectContext(cwd).allProjects for project scoping (same as SessionStart) - Convert absolute file_path to relative using cwd (observations store relative paths) - API accepts comma-separated projects param with IN() SQL filter - Remove basename matching — use full relative path to avoid cross-file collisions Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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fb9d917f8a |
feat: inject file observation timeline on PreToolUse Read hook
When Claude reads a file, the PreToolUse hook queries for existing observations about that file and injects the timeline into context via additionalContext + permissionDecision: allow. This prevents duplicate observations and saves tokens through active rediscovery. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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80a8c90a1a |
feat: add embedded Process Supervisor for unified process lifecycle (#1370)
* feat: add embedded Process Supervisor for unified process lifecycle management Consolidates scattered process management (ProcessManager, GracefulShutdown, HealthMonitor, ProcessRegistry) into a unified src/supervisor/ module. New: ProcessRegistry with JSON persistence, env sanitizer (strips CLAUDECODE_* vars), graceful shutdown cascade (SIGTERM → 5s wait → SIGKILL with tree-kill on Windows), PID file liveness validation, and singleton Supervisor API. Fixes #1352 (worker inherits CLAUDECODE env causing nested sessions) Fixes #1356 (zombie TCP socket after Windows reboot) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add session-scoped process reaping to supervisor Adds reapSession(sessionId) to ProcessRegistry for killing session-tagged processes on session end. SessionManager.deleteSession() now triggers reaping. Tightens orphan reaper interval from 60s to 30s. Fixes #1351 (MCP server processes leak on session end) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add Unix domain socket support for worker communication Introduces socket-manager.ts for UDS-based worker communication, eliminating port 37777 collisions between concurrent sessions. Worker listens on ~/.claude-mem/sockets/worker.sock by default with TCP fallback. All hook handlers, MCP server, health checks, and admin commands updated to use socket-aware workerHttpRequest(). Backwards compatible — settings can force TCP mode via CLAUDE_MEM_WORKER_TRANSPORT=tcp. Fixes #1346 (port 37777 collision across concurrent sessions) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: remove in-process worker fallback from hook command Removes the fallback path where hook scripts started WorkerService in-process, making the worker a grandchild of Claude Code (killed by sandbox). Hooks now always delegate to ensureWorkerStarted() which spawns a fully detached daemon. Fixes #1249 (grandchild process killed by sandbox) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add health checker and /api/admin/doctor endpoint Adds 30-second periodic health sweep that prunes dead processes from the supervisor registry and cleans stale socket files. Adds /api/admin/doctor endpoint exposing supervisor state, process liveness, and environment health. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * test: add comprehensive supervisor test suite 64 tests covering all supervisor modules: process registry (18 tests), env sanitizer (8), shutdown cascade (10), socket manager (15), health checker (5), and supervisor API (6). Includes persistence, isolation, edge cases, and cross-module integration scenarios. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: revert Unix domain socket transport, restore TCP on port 37777 The socket-manager introduced UDS as default transport, but this broke the HTTP server's TCP accessibility (viewer UI, curl, external monitoring). Since there's only ever one worker process handling all sessions, the port collision rationale for UDS doesn't apply. Reverts to TCP-only, removing ~900 lines of unnecessary complexity. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * chore: remove dead code found in pre-landing review Remove unused `acceptingSpawns` field from Supervisor class (written but never read — assertCanSpawn uses stopPromise instead) and unused `buildWorkerUrl` import from context handler. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * updated gitignore * fix: address PR review feedback - downgrade HTTP logging, clean up gitignore, harden supervisor - Downgrade request/response HTTP logging from info to debug to reduce noise - Remove unused getWorkerPort imports, use buildWorkerUrl helper - Export ENV_PREFIXES/ENV_EXACT_MATCHES from env-sanitizer, reuse in Server.ts - Fix isPidAlive(0) returning true (should be false) - Add shutdownInitiated flag to prevent signal handler race condition - Make validateWorkerPidFile testable with pidFilePath option - Remove unused dataDir from ShutdownCascadeOptions - Upgrade reapSession log from debug to warn - Rename zombiePidFiles to deadProcessPids (returns actual PIDs) - Clean up gitignore: remove duplicate datasets/, stale ~*/ and http*/ patterns - Fix tests to use temp directories instead of relying on real PID file Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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enzoricciulli
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e7ba9acaa7 |
fix: add content-hash dedup to batch observation store methods (#1302)
storeObservations() and storeObservationsAndMarkComplete() were missing the content-hash deduplication that storeObservation() (singular) already had via computeObservationContentHash() and findDuplicateObservation(). This caused the Gemini provider (and potentially others that return multiple observations per response) to insert 2-10x duplicate rows per tool use, since the batch methods inserted unconditionally without checking content_hash. The fix adds the same dedup pattern from storeObservation() to both batch methods: 1. Compute content hash via computeObservationContentHash() 2. Check for existing observation within 30s window via findDuplicateObservation() 3. Skip insert and reuse existing ID if duplicate found 4. Include content_hash column in INSERT statement Fixes #1158 (duplicate observations with Gemini provider) Co-authored-by: Enzo Ricciulli <e.ricciulli@systhema.ai> |
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antmid
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ad902bedd9 |
fix: auto-repair malformed database schema from cross-version sync (#1308)
When a claude-mem DB is synced between machines running different versions, orphaned indexes can reference non-existent columns (e.g. idx_observations_content_hash referencing content_hash). This causes SQLite to throw "malformed database schema" on ALL queries, including PRAGMAs, creating a silent 503 failure loop. The fix detects this on startup, uses Python's sqlite3 module to drop the orphaned schema objects (bun:sqlite doesn't support writable_schema modifications), resets migration versions, and lets the idempotent migration system recreate everything properly. Fixes #1307 Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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c6f932988a |
Fix 30+ root-cause bugs across 10 triage phases (#1214)
* MAESTRO: fix ChromaDB core issues — Python pinning, Windows paths, disable toggle, metadata sanitization, transport errors - Add --python version pinning to uvx args in both local and remote mode (fixes #1196, #1206, #1208) - Convert backslash paths to forward slashes for --data-dir on Windows (fixes #1199) - Add CLAUDE_MEM_CHROMA_ENABLED setting for SQLite-only fallback mode (fixes #707) - Sanitize metadata in addDocuments() to filter null/undefined/empty values (fixes #1183, #1188) - Wrap callTool() in try/catch for transport errors with auto-reconnect (fixes #1162) Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix data integrity — content-hash deduplication, project name collision, empty project guard, stuck isProcessing - Add SHA-256 content-hash deduplication to observations INSERT (store.ts, transactions.ts, SessionStore.ts) - Add content_hash column via migration 22 with backfill and index - Fix project name collision: getCurrentProjectName() now returns parent/basename - Guard against empty project string with cwd-derived fallback - Fix stuck isProcessing: hasAnyPendingWork() resets processing messages older than 5 minutes - Add 12 new tests covering all four fixes Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix hook lifecycle — stderr suppression, output isolation, conversation pollution prevention - Suppress process.stderr.write in hookCommand() to prevent Claude Code showing diagnostic output as error UI (#1181). Restores stderr in finally block for worker-continues case. - Convert console.error() to logger.warn()/error() in hook-command.ts and handlers/index.ts so all diagnostics route to log file instead of stderr. - Verified all 7 handlers return suppressOutput: true (prevents conversation pollution #598, #784). - Verified session-complete is a recognized event type (fixes #984). - Verified unknown event types return no-op handler with exit 0 (graceful degradation). - Added 10 new tests in tests/hook-lifecycle.test.ts covering event dispatch, adapter defaults, stderr suppression, and standard response constants. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix worker lifecycle — restart loop coordination, stale transport retry, ENOENT shutdown race - Add PID file mtime guard to prevent concurrent restart storms (#1145): isPidFileRecent() + touchPidFile() coordinate across sessions - Add transparent retry in ChromaMcpManager.callTool() on transport error — reconnects and retries once instead of failing (#1131) - Wrap getInstalledPluginVersion() with ENOENT/EBUSY handling (#1042) - Verified ChromaMcpManager.stop() already called on all shutdown paths Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix Windows platform support — uvx.cmd spawn, PowerShell $_ elimination, windowsHide, FTS5 fallback - Route uvx spawn through cmd.exe /c on Windows since MCP SDK lacks shell:true (#1190, #1192, #1199) - Replace all PowerShell Where-Object {$_} pipelines with WQL -Filter server-side filtering (#1024, #1062) - Add windowsHide: true to all exec/spawn calls missing it to prevent console popups (#1048) - Add FTS5 runtime probe with graceful fallback when unavailable on Windows (#791) - Guard FTS5 table creation in migrations, SessionSearch, and SessionStore with try/catch Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix skills/ distribution — build-time verification and regression tests (#1187) Add post-build verification in build-hooks.js that fails if critical distribution files (skills, hooks, plugin manifest) are missing. Add 10 regression tests covering skill file presence, YAML frontmatter, hooks.json integrity, and package.json files field. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix MigrationRunner schema initialization (#979) — version conflict between parallel migration systems Root cause: old DatabaseManager migrations 1-7 shared schema_versions table with MigrationRunner's 4-22, causing version number collisions (5=drop tables vs add column, 6=FTS5 vs prompt tracking, 7=discovery_tokens vs remove UNIQUE). initializeSchema() was gated behind maxApplied===0, so core tables were never created when old versions were present. Fixes: - initializeSchema() always creates core tables via CREATE TABLE IF NOT EXISTS - Migrations 5-7 check actual DB state (columns/constraints) not just version tracking - Crash-safe temp table rebuilds (DROP IF EXISTS _new before CREATE) - Added missing migration 21 (ON UPDATE CASCADE) to MigrationRunner - Added ON UPDATE CASCADE to FK definitions in initializeSchema() - All changes applied to both runner.ts and SessionStore.ts Tests: 13 new tests in migration-runner.test.ts covering fresh DB, idempotency, version conflicts, crash recovery, FK constraints, and data integrity. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix 21 test failures — stale mocks, outdated assertions, missing OpenClaw guards Server tests (12): Added missing workerPath and getAiStatus to ServerOptions mocks after interface expansion. ChromaSync tests (3): Updated to verify transport cleanup in ChromaMcpManager after architecture refactor. OpenClaw (2): Added memory_ tool skipping and response truncation to prevent recursive loops and oversized payloads. MarkdownFormatter (2): Updated assertions to match current output. SettingsDefaultsManager (1): Used correct default key for getBool test. Logger standards (1): Excluded CLI transcript command from background service check. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix Codex CLI compatibility (#744) — session_id fallbacks, unknown platform tolerance, undefined guard Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix Cursor IDE integration (#838, #1049) — adapter field fallbacks, tolerant session-init validation Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix /api/logs OOM (#1203) — tail-read replaces full-file readFileSync Replace readFileSync (loads entire file into memory) with readLastLines() that reads only from the end of the file in expanding chunks (64KB → 10MB cap). Prevents OOM on large log files while preserving the same API response shape. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix Settings CORS error (#1029) — explicit methods and allowedHeaders in CORS config Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: add session custom_title for agent attribution (#1213) — migration 23, endpoint + store support Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: prevent CLAUDE.md/AGENTS.md writes inside .git/ directories (#1165) Add .git path guard to all 4 write sites to prevent ref corruption when paths resolve inside .git internals. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix plugin disabled state not respected (#781) — early exit check in all hook entry points Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix UserPromptSubmit context re-injection on every turn (#1079) — contextInjected session flag Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * MAESTRO: fix stale AbortController queue stall (#1099) — lastGeneratorActivity tracking + 30s timeout Three-layer fix: 1. Added lastGeneratorActivity timestamp to ActiveSession, updated by processAgentResponse (all agents), getMessageIterator (queue yields), and startGeneratorWithProvider (generator launch) 2. Added stale generator detection in ensureGeneratorRunning — if no activity for >30s, aborts stale controller, resets state, restarts 3. Added AbortSignal.timeout(30000) in deleteSession to prevent indefinite hang when awaiting a stuck generator promise Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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b88251bc8b |
fix: self-healing claimNextMessage prevents stuck processing messages (#1159)
* fix: self-healing claimNextMessage prevents stuck processing messages claimAndDelete → claimNextMessage with atomic self-healing: resets stale processing messages (>60s) back to pending before claiming. Eliminates stuck messages from generator crashes without external timers. Removes redundant idle-timeout reset in worker-service.ts. Adds QUEUE to logger Component type. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: update stale comments in SessionQueueProcessor to reflect claim-confirm pattern Comments still referenced the old claim-and-delete pattern after the claimNextMessage rename. Updated to accurately describe the current lifecycle where messages are marked as processing and stay in DB until confirmProcessed() is called. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: move Date.now() inside transaction and extract stale threshold constant - Move Date.now() inside claimNextMessage transaction closure so timestamp is fresh if WAL contention causes retry - Extract STALE_PROCESSING_THRESHOLD_MS to module-level constant - Add comment clarifying strict < boundary semantics Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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d2e926fbf7 |
fix: post-merge breakage (Gemini, idle timeout, sharp cache) (#1138)
* fix: add gemini-3-flash to validModels array The model was defined in the type union and RPM limits but missing from the runtime validModels array, causing silent fallback to gemini-2.5-flash. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: skip processing when Gemini returns empty observation response Empty responses were silently consuming messages from the queue via processAgentResponse. Now skips processing on empty content, leaving the message in processing status for stale recovery. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: prevent idle timeout from triggering infinite restart loop When a session hits the 3-minute idle timeout, the finally block was seeing stale processing messages and restarting the generator endlessly. Now tracks idle timeout as a distinct exit reason via session flag, resets stale messages, and skips restart. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: clear stale Bun native module cache on update Bun's global cache retains sharp/libvips native binaries with broken dylib references after version upgrades. Clear ~/.bun/install/cache/@img/ before install in both the end-user (smart-install) and dev (sync-marketplace) paths to prevent ERR_DLOPEN_FAILED errors in Chroma sync. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: address PR review feedback (empty summary response, session-scoped reset, shell injection) - Apply same empty-response guard to summary path as observation path in GeminiAgent - Add optional sessionDbId param to resetStaleProcessingMessages for session-scoped resets - Use JSON.stringify for gitignore pattern escaping, filter negation patterns Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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5969d670d0 |
chore: bump version to 9.1.1
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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8dfcb5e612 |
chore: bump version to 9.1.0
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
|
98920bd860 |
MAESTRO: Merge PR #662 - Add save_memory MCP tool for manual memory storage
Adds save_memory MCP tool allowing users to manually save observations for semantic search. Source changes cherry-picked from PR #662 by @darconada (build artifact conflicts resolved by direct application). Closes #645. Co-Authored-By: darconadalabarga <darconada@arsys.es> Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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da1d2cd36a |
MAESTRO: fix(db): prevent FK constraint failures on worker restart
Cherry-picked source changes from PR #889 by @Et9797. Fixes #846. Key changes: - Add ensureMemorySessionIdRegistered() guard in SessionStore.ts - Add ON UPDATE CASCADE migration (schema v21) for observations and session_summaries FK constraints - Change message queue from claim-and-delete to claim-confirm pattern (PendingMessageStore.ts) - Add spawn deduplication and unrecoverable error detection in SessionRoutes.ts and worker-service.ts - Add forceInit flag to SDKAgent for stale session recovery Build artifacts skipped (pre-existing dompurify dep issue). Path fixes (HealthMonitor.ts, worker-utils.ts) already merged via PR #634. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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jayvenn21
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f24bba21e9 | fix(worker): gracefully process orphaned pending messages after session termination | ||
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Michael Lipscombe
|
af308ea5c8 |
fix: Backfill project field on SDK session creation to prevent race condition
PostToolUse hook can create the session before UserPromptSubmit's session-init sets the project, leaving it empty. Add an UPDATE after INSERT OR IGNORE to backfill the project when a later hook provides it. Closes #939 Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
4df9f61347 |
refactor: implement in-process worker architecture for hooks (#722)
* fix: stop generating empty CLAUDE.md files - Return empty string instead of "No recent activity" when no observations exist - Skip writing CLAUDE.md files when formatted content is empty - Remove redundant "auto-generated by claude-mem" HTML comment - Clean up 98 existing empty CLAUDE.md files across the codebase - Update tests to expect empty string for empty input Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets * refactor: implement in-process worker architecture for hooks Replaces spawn-based worker startup with in-process architecture: - Hook processes now become the worker when port 37777 is free - Eliminates Windows spawn issues (NO SPAWN rule) - SessionStart chains: smart-install && stop && context Key changes: - worker-service.ts: hook case starts WorkerService in-process - hook-command.ts: skipExit option prevents process.exit() when hosting worker - hooks.json: single chained command replaces separate start/hook commands - worker-utils.ts: ensureWorkerRunning() returns boolean, doesn't block - handlers: graceful fallback when worker unavailable All 761 tests pass. Manual verification confirms hook stays alive as worker. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * context * a * MAESTRO: Mark PR #722 test verification task complete All 797 tests passed (3 skipped, 0 failed) after merge conflict resolution. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * MAESTRO: Mark PR #722 build verification task complete * MAESTRO: Mark PR #722 code review task complete Code review verified: - worker-service.ts hook case starts WorkerService in-process - hook-command.ts has skipExit option - hooks.json uses single chained command - worker-utils.ts ensureWorkerRunning() returns boolean Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * MAESTRO: Mark PR #722 conflict resolution push task complete Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
57a60c1309 |
chore: bump version to 9.0.13
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> |
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Alexander Knigge
|
182097ef1c |
fix: resolve path format mismatch in folder CLAUDE.md generation (#794) (#813)
The isDirectChild() function failed to match files when the API used absolute paths (/Users/x/project/app/api) but the database stored relative paths (app/api/router.py). This caused all folder CLAUDE.md files to incorrectly show "No recent activity". Changes: - Create shared path-utils module with proper path normalization - Implement suffix matching strategy for mixed path formats - Update SessionSearch.ts to use shared utilities - Update regenerate-claude-md.ts to use shared utilities (was using outdated broken logic) - Prevent spurious directory creation from malformed paths - Add comprehensive test coverage for path matching edge cases This is the proper fix for #794, replacing PR #809 which only masked the bug by skipping file creation when "no activity" was shown. Co-authored-by: bigphoot <bigphoot@gmail.com> Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
2659ec3231 |
fix: Claude Code 2.1.1 compatibility + log-level audit + path validation fixes (#614)
* Refactor CLAUDE.md and related files for December 2025 updates - Updated CLAUDE.md in src/services/worker with new entries for December 2025, including changes to Search.ts, GeminiAgent.ts, SDKAgent.ts, and SessionManager.ts. - Revised CLAUDE.md in src/shared to reflect updates and new entries for December 2025, including paths.ts and worker-utils.ts. - Modified hook-constants.ts to clarify exit codes and their behaviors. - Added comprehensive hooks reference documentation for Claude Code, detailing usage, events, and examples. - Created initial CLAUDE.md files in various directories to track recent activity. * fix: Merge user-message-hook output into context-hook hookSpecificOutput - Add footer message to additionalContext in context-hook.ts - Remove user-message-hook from SessionStart hooks array - Fixes issue where stderr+exit(1) approach was silently discarded Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Update logs and documentation for recent plugin and worker service changes - Added detailed logs for worker service activities from Dec 10, 2025 to Jan 7, 2026, including initialization patterns, cleanup confirmations, and diagnostic logging. - Updated plugin documentation with recent activities, including plugin synchronization and configuration changes from Dec 3, 2025 to Jan 7, 2026. - Enhanced the context hook and worker service logs to reflect improvements and fixes in the plugin architecture. - Documented the migration and verification processes for the Claude memory system and its integration with the marketplace. * Refactor hooks architecture and remove deprecated user-message-hook - Updated hook configurations in CLAUDE.md and hooks.json to reflect changes in session start behavior. - Removed user-message-hook functionality as it is no longer utilized in Claude Code 2.1.0; context is now injected silently. - Enhanced context-hook to handle session context injection without user-visible messages. - Cleaned up documentation across multiple files to align with the new hook structure and removed references to obsolete hooks. - Adjusted timing and command execution for hooks to improve performance and reliability. * fix: Address PR #610 review issues - Replace USER_MESSAGE_ONLY test with BLOCKING_ERROR test in hook-constants.test.ts - Standardize Claude Code 2.1.0 note wording across all three documentation files - Exclude deprecated user-message-hook.ts from logger-usage-standards test Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: Remove hardcoded fake token counts from context injection Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Address PR #610 review issues by fixing test files, standardizing documentation notes, and verifying code quality improvements. * fix: Add path validation to CLAUDE.md distribution to prevent invalid directory creation - Add isValidPathForClaudeMd() function to reject invalid paths: - Tilde paths (~) that Node.js doesn't expand - URLs (http://, https://) - Paths with spaces (likely command text or PR references) - Paths with # (GitHub issue/PR references) - Relative paths that escape project boundary - Integrate validation in updateFolderClaudeMdFiles loop - Add 6 unit tests for path validation - Update .gitignore to prevent accidental commit of malformed directories - Clean up existing invalid directories (~/, PR #610..., git diff..., https:) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: Implement path validation in CLAUDE.md generation to prevent invalid directory creation - Added `isValidPathForClaudeMd()` function to validate file paths in `src/utils/claude-md-utils.ts`. - Integrated path validation in `updateFolderClaudeMdFiles` to skip invalid paths. - Added 6 new unit tests in `tests/utils/claude-md-utils.test.ts` to cover various rejection cases. - Updated `.gitignore` to prevent tracking of invalid directories. - Cleaned up existing invalid directories in the repository. * feat: Promote critical WARN logs to ERROR level across codebase Comprehensive log-level audit promoting 38+ WARN messages to ERROR for improved debugging and incident response: - Parser: observation type errors, data contamination - SDK/Agents: empty init responses (Gemini, OpenRouter) - Worker/Queue: session recovery, auto-recovery failures - Chroma: sync failures, search failures (now treated as critical) - SQLite: search failures (primary data store) - Session/Generator: failures, missing context - Infrastructure: shutdown, process management failures - File Operations: CLAUDE.md updates, config reads - Branch Management: recovery checkout failures Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: Address PR #614 review issues - Remove incorrectly tracked tilde-prefixed files from git - Fix absolute path validation to check projectRoot boundaries - Add test coverage for absolute path validation edge cases Closes review issues: - Issue 1: ~/ prefixed files removed from tracking - Issue 3: Absolute paths now validated against projectRoot - Issue 4: Added 3 new test cases for absolute path scenarios Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets and context --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
a3d6bfc7dd |
feat: Update CLAUDE.md files with recent test activities and improvements
- Added detailed entries for test activities across various modules including `export-types.test.ts`, `server.test.ts`, `smart-install.test.ts`, and others. - Documented significant changes in test coverage, cleanup efforts, and regression tests. - Enhanced the `plans` documentation with recent implementation strategies and PR follow-ups. - Introduced a comprehensive report on Windows platform challenges and solutions, detailing issues like zombie ports, console popups, and process management. - Established a new `ProcessManager` architecture to address Windows-specific issues and improve reliability. - Updated integration tests to reflect recent changes and ensure comprehensive coverage. |
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Alex Newman
|
e1ab73decc |
feat: Live Context System with Distributed CLAUDE.md Generation (#556)
* docs: add folder index generator plan RFC for auto-generating folder-level CLAUDE.md files with observation timelines. Includes IDE symlink support and root CLAUDE.md integration. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: implement folder index generator (Phase 1) Add automatic CLAUDE.md generation for folders containing observed files. This enables IDE context providers to access relevant memory observations. Core modules: - FolderDiscovery: Extract folders from observation file paths - FolderTimelineCompiler: Compile chronological timeline per folder - ClaudeMdGenerator: Write CLAUDE.md with tag-based content replacement - FolderIndexOrchestrator: Coordinate regeneration on observation save Integration: - Event-driven regeneration after observation save in ResponseProcessor - HTTP endpoints for folder discovery, timeline, and manual generation - Settings for enabling/configuring folder index behavior The <claude-mem-context> tag wrapping ensures: - Manual CLAUDE.md content is preserved - Auto-generated content won't be recursively observed - Clean separation between user and system content 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add updateFolderClaudeMd function to CursorHooksInstaller Adds function to update CLAUDE.md files for folders touched by observations. Uses existing /api/search/by-file endpoint, preserves content outside <claude-mem-context> tags, and writes atomically via temp file + rename. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: hook updateFolderClaudeMd into ResponseProcessor Calls updateFolderClaudeMd after observation save to update folder-level CLAUDE.md files. Uses fire-and-forget pattern with error logging. Extracts file paths from saved observations and workspace path from registry. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add timeline formatting for folder CLAUDE.md files Implements formatTimelineForClaudeMd function that transforms API response into compact markdown table format. Converts emojis to text labels, handles ditto marks for timestamps, and groups under "Recent" header. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: remove old folder-index implementation Deletes redundant folder-index services that were replaced by the simpler updateFolderClaudeMd approach in CursorHooksInstaller.ts. Removed: - src/services/folder-index/ directory (5 files) - FolderIndexRoutes.ts - folder-index settings from SettingsDefaultsManager - folder-index route registration from worker-service 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add worktree-aware project filtering for unified timelines Detect git worktrees and show both parent repo and worktree observations in the session start timeline. When running in a worktree, the context now includes observations from both projects, interleaved chronologically. - Add detectWorktree() utility to identify worktree directories - Add getProjectContext() to return parent + worktree projects - Update context hook to pass multi-project queries - Add queryObservationsMulti() and querySummariesMulti() for IN clauses - Maintain backward compatibility with single-project queries 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * fix: restructure logging to prove session correctness and reduce noise Add critical logging at each stage of the session lifecycle to prove the session ID chain (contentSessionId → sessionDbId → memorySessionId) stays aligned. New logs include CREATED, ENQUEUED, CLAIMED, MEMORY_ID_CAPTURED, STORING, and STORED. Move intermediate migration and backfill progress logs to DEBUG level to reduce noise, keeping only essential initialization and completion logs at INFO level. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * refactor: extract folder CLAUDE.md utils to shared location Moves folder CLAUDE.md utilities from CursorHooksInstaller to a new shared utils file. Removes Cursor registry dependency - file paths from observations are already absolute, no workspace lookup needed. New file: src/utils/claude-md-utils.ts - replaceTaggedContent() - preserves user content outside tags - writeClaudeMdToFolder() - atomic writes with tag preservation - formatTimelineForClaudeMd() - API response to compact markdown - updateFolderClaudeMdFiles() - orchestrates folder updates 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: trigger folder CLAUDE.md updates when observations are saved The folder CLAUDE.md update was previously only triggered in syncAndBroadcastSummary, but summaries run with observationCount=0 (observations are saved separately). Moved the update logic to syncAndBroadcastObservations where file paths are available. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * all the claudes * test: add unit tests for claude-md-utils pure functions Add 11 tests covering replaceTaggedContent and formatTimelineForClaudeMd: - replaceTaggedContent: empty content, tag replacement, appending, partial tags - formatTimelineForClaudeMd: empty input, parsing, ditto marks, session IDs 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add integration tests for file operation functions Add 9 tests for writeClaudeMdToFolder and updateFolderClaudeMdFiles: - writeClaudeMdToFolder: folder creation, content preservation, nested dirs, atomic writes - updateFolderClaudeMdFiles: empty skip, fetch/write, deduplication, error handling 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add unit tests for timeline-formatting utilities Add 14 tests for extractFirstFile and groupByDate functions: - extractFirstFile: relative paths, fallback to files_read, null handling, invalid JSON - groupByDate: empty arrays, date grouping, chronological sorting, item preservation 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore: rebuild plugin scripts with merged features * docs: add project-specific CLAUDE.md with architecture and development notes * fix: exclude project root from auto-generated CLAUDE.md updates Skip folders containing .git directory when auto-updating subfolder CLAUDE.md files. This ensures: 1. Root CLAUDE.md remains user-managed and untouched by the system 2. SessionStart context injection stays pristine throughout the session 3. Subfolder CLAUDE.md files continue to receive live context updates 4. Cleaner separation between user-authored root docs and auto-generated folder indexes 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: prevent crash from resuming stale SDK sessions on worker restart When the worker restarts, it was incorrectly passing the `resume` parameter to INIT prompts (lastPromptNumber=1) when a memorySessionId existed from a previous SDK session. This caused "Claude Code process exited with code 1" crashes because the SDK tried to resume into a session that no longer exists. Root cause: The resume condition only checked `hasRealMemorySessionId` but did not verify that this was a CONTINUATION prompt (lastPromptNumber > 1). Fix: Add `session.lastPromptNumber > 1` check to the resume condition: - Before: `...(hasRealMemorySessionId && { resume: session.memorySessionId })` - After: `...(hasRealMemorySessionId && session.lastPromptNumber > 1 && { resume: ... })` Also added: - Enhanced debug logging that warns when skipping resume for INIT prompts - Unit tests in tests/sdk-agent-resume.test.ts (9 test cases) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: properly handle Chroma MCP connection errors Previously, ensureCollection() caught ALL errors from chroma_get_collection_info and assumed they meant "collection doesn't exist", triggering unnecessary collection creation attempts. Connection errors like "Not connected" or "MCP error -32000: Connection closed" would cascade into failed creation attempts. Similarly, queryChroma() would silently return empty results when the MCP call failed, masking the underlying connection problem. Changes: - ensureCollection(): Detect connection errors and re-throw immediately instead of attempting collection creation - queryChroma(): Wrap MCP call in try-catch and throw connection errors instead of returning empty results - Both methods reset connection state (connected=false, client=null) on connection errors so subsequent operations can attempt to reconnect 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * pushed * fix: scope regenerate-claude-md.ts to current working directory Critical bug fix: The script was querying ALL observations from the database across ALL projects ever recorded (1396+ folders), then attempting to write CLAUDE.md files everywhere including other projects, non-existent paths, and ignored directories. Changes: - Use git ls-files to discover folders (respects .gitignore automatically) - Filter database query to current project only (by folder name) - Use relative paths for database queries (matches storage format) - Add --clean flag to remove auto-generated CLAUDE.md files - Add fallback directory walker for non-git repos Now correctly scopes to 26 folders with observations instead of 1396+. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * docs and adjustments * fix: cleanup mode strips tags instead of deleting files blindly The cleanup mode was incorrectly deleting entire files that contained <claude-mem-context> tags. The correct behavior (per original design): 1. Strip the <claude-mem-context>...</claude-mem-context> section 2. If empty after stripping → delete the file 3. If has remaining content → save the stripped version Now properly preserves user content in CLAUDE.md files while removing only the auto-generated sections. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * deleted some files * chore: regenerate folder CLAUDE.md files with fixed script Regenerated 23 folder CLAUDE.md files using the corrected script that: - Scopes to current working directory only - Uses git ls-files to respect .gitignore - Filters by project name 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Update CLAUDE.md files for January 5, 2026 - Regenerated and staged 23 CLAUDE.md files with a mix of new and modified content. - Fixed cleanup mode to properly strip tags instead of deleting files blindly. - Cleaned up empty CLAUDE.md files from various directories, including ~/.claude and ~/Scripts. - Conducted dry-run cleanup that identified a significant reduction in auto-generated CLAUDE.md files. - Removed the isAutoGeneratedClaudeMd function due to incorrect file deletion behavior. * feat: use settings for observation limit in batch regeneration script Replace hard-coded limit of 10 with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). This allows users to control how many observations appear in folder CLAUDE.md files. Changes: - Import SettingsDefaultsManager and load settings at script startup - Use OBSERVATION_LIMIT constant derived from settings at both call sites - Remove stale default parameter from findObservationsByFolder function 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: use settings for observation limit in event-driven updates Replace hard-coded limit of 10 in updateFolderClaudeMdFiles with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). Changes: - Import SettingsDefaultsManager and os module - Load settings at function start (once, not in loop) - Use limit from settings in API call 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: Implement configurable observation limits and enhance search functionality - Added configurable observation limits to batch regeneration scripts. - Enhanced SearchManager to handle folder queries and normalize parameters. - Introduced methods to check for direct child files in observations and sessions. - Updated SearchOptions interface to include isFolder flag for filtering. - Improved code quality with comprehensive reviews and anti-pattern checks. - Cleaned up auto-generated CLAUDE.md files across various directories. - Documented recent changes and improvements in CLAUDE.md files. * build asset * Project Context from Claude-Mem auto-added (can be auto removed at any time) * CLAUDE.md updates * fix: resolve CLAUDE.md files to correct directory in worktree setups When using git worktrees, CLAUDE.md files were being written relative to the worker's process.cwd() instead of the actual project directory. This fix threads the project's cwd from message processing through to the file writing utilities, ensuring CLAUDE.md files are created in the correct project directory regardless of where the worker was started. Changes: - Add projectRoot parameter to updateFolderClaudeMdFiles for path resolution - Thread projectRoot through ResponseProcessor call chain - Track lastCwd from messages in SDKAgent, GeminiAgent, OpenRouterAgent - Add tests for relative/absolute path handling with projectRoot 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * more project context updates * context updates * fix: preserve actual dates in folder CLAUDE.md generation Previously, formatTimelineForClaudeMd used today's date for all observations because the API only returned time (e.g., "4:30 PM") without date information. This caused all historical observations to appear as if they happened today. Changes: - SearchManager.findByFile now groups results by date with headers (e.g., "### Jan 4, 2026") matching formatSearchResults behavior - formatTimelineForClaudeMd now parses these date headers and uses the correct date when constructing epochs for date grouping The timeline dates are critical for claude-mem context - LLMs need accurate temporal context to understand when work happened. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build: update worker assets with date parsing fix 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * claude-mem context: Fixed critical date parsing bug in PR #556 * fix: address PR #556 review items - Use getWorkerHost() instead of hard-coded 127.0.0.1 in claude-md-utils - Add error message and stack details to FOLDER_INDEX logging - Add 5 new tests for worktree/projectRoot path resolution 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor CLAUDE documentation across multiple components and tests - Updated CLAUDE.md files in src/ui/viewer, src/ui/viewer/constants, src/ui/viewer/hooks, tests/server, tests/worker/agents, and plans to reflect recent changes and improvements. - Removed outdated entries and consolidated recent activities for clarity. - Enhanced documentation for hooks, settings, and pagination implementations. - Streamlined test suite documentation for server and worker agents, indicating recent test audits and cleanup efforts. - Adjusted plans to remove obsolete entries and focus on current implementation strategies. * docs: comprehensive v9.0 documentation audit and updates - Add usage/folder-context to docs.json navigation (was documented but hidden!) - Update introduction.mdx with v9.0 release notes (Live Context, Worktree Support, Windows Fixes) - Add CLAUDE_MEM_WORKER_HOST setting to configuration.mdx - Add Folder Context Files section with link to detailed docs - Document worktree support in folder-context.mdx - Update terminology from "mem-search skill" to "MCP tools" throughout active docs - Update Search Pipeline in architecture/overview.mdx - Update usage/getting-started.mdx with MCP tools terminology - Update usage/claude-desktop.mdx title and terminology - Update hooks-architecture.mdx reference 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add recent activity log for worker CLI with detailed entries * chore: update CLAUDE.md context files 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add brainstorming report for CLAUDE.md distribution architecture --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
f21ea97c39 |
refactor: decompose monolith into modular architecture with comprehensive test suite (#538)
* fix: prevent memory_session_id from equaling content_session_id The bug: memory_session_id was initialized to contentSessionId as a "placeholder for FK purposes". This caused the SDK resume logic to inject memory agent messages into the USER's Claude Code transcript, corrupting their conversation history. Root cause: - SessionStore.createSDKSession initialized memory_session_id = contentSessionId - SDKAgent checked memorySessionId !== contentSessionId but this check only worked if the session was fetched fresh from DB The fix: - SessionStore: Initialize memory_session_id as NULL, not contentSessionId - SDKAgent: Simple truthy check !!session.memorySessionId (NULL = fresh start) - Database migration: Ran UPDATE to set memory_session_id = NULL for 1807 existing sessions that had the bug Also adds [ALIGNMENT] logging across the session lifecycle to help debug session continuity issues: - Hook entry: contentSessionId + promptNumber - DB lookup: contentSessionId → memorySessionId mapping proof - Resume decision: shows which memorySessionId will be used for resume - Capture: logs when memorySessionId is captured from first SDK response UI: Added "Alignment" quick filter button in LogsModal to show only alignment logs for debugging session continuity. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: improve error handling in worker-service.ts - Fix GENERIC_CATCH anti-patterns by logging full error objects instead of just messages - Add [ANTI-PATTERN IGNORED] markers for legitimate cases (cleanup, hot paths) - Simplify error handling comments to be more concise - Improve httpShutdown() error discrimination for ECONNREFUSED - Reduce LARGE_TRY_BLOCK issues in initialization code Part of anti-pattern cleanup plan (132 total issues) * refactor: improve error logging in SearchManager.ts - Pass full error objects to logger instead of just error.message - Fixes PARTIAL_ERROR_LOGGING anti-patterns (10 instances) - Better debugging visibility when Chroma queries fail Part of anti-pattern cleanup (133 remaining) * refactor: improve error logging across SessionStore and mcp-server - SessionStore.ts: Fix error logging in column rename utility - mcp-server.ts: Log full error objects instead of just error.message - Improve error handling in Worker API calls and tool execution Part of anti-pattern cleanup (133 remaining) * Refactor hooks to streamline error handling and loading states - Simplified error handling in useContextPreview by removing try-catch and directly checking response status. - Refactored usePagination to eliminate try-catch, improving readability and maintaining error handling through response checks. - Cleaned up useSSE by removing unnecessary try-catch around JSON parsing, ensuring clarity in message handling. - Enhanced useSettings by streamlining the saving process, removing try-catch, and directly checking the result for success. * refactor: add error handling back to SearchManager Chroma calls - Wrap queryChroma calls in try-catch to prevent generator crashes - Log Chroma errors as warnings and fall back gracefully - Fixes generator failures when Chroma has issues - Part of anti-pattern cleanup recovery * feat: Add generator failure investigation report and observation duplication regression report - Created a comprehensive investigation report detailing the root cause of generator failures during anti-pattern cleanup, including the impact, investigation process, and implemented fixes. - Documented the critical regression causing observation duplication due to race conditions in the SDK agent, outlining symptoms, root cause analysis, and proposed fixes. * fix: address PR #528 review comments - atomic cleanup and detector improvements This commit addresses critical review feedback from PR #528: ## 1. Atomic Message Cleanup (Fix Race Condition) **Problem**: SessionRoutes.ts generator error handler had race condition - Queried messages then marked failed in loop - If crash during loop → partial marking → inconsistent state **Solution**: - Added `markSessionMessagesFailed()` to PendingMessageStore.ts - Single atomic UPDATE statement replaces loop - Follows existing pattern from `resetProcessingToPending()` **Files**: - src/services/sqlite/PendingMessageStore.ts (new method) - src/services/worker/http/routes/SessionRoutes.ts (use new method) ## 2. Anti-Pattern Detector Improvements **Problem**: Detector didn't recognize logger.failure() method - Lines 212 & 335 already included "failure" - Lines 112-113 (PARTIAL_ERROR_LOGGING detection) did not **Solution**: Updated regex patterns to include "failure" for consistency **Files**: - scripts/anti-pattern-test/detect-error-handling-antipatterns.ts ## 3. Documentation **PR Comment**: Added clarification on memory_session_id fix location - Points to SessionStore.ts:1155 - Explains why NULL initialization prevents message injection bug ## Review Response Addresses "Must Address Before Merge" items from review: ✅ Clarified memory_session_id bug fix location (via PR comment) ✅ Made generator error handler message cleanup atomic ❌ Deferred comprehensive test suite to follow-up PR (keeps PR focused) ## Testing - Build passes with no errors - Anti-pattern detector runs successfully - Atomic cleanup follows proven pattern from existing methods 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: FOREIGN KEY constraint and missing failed_at_epoch column Two critical bugs fixed: 1. Missing failed_at_epoch column in pending_messages table - Added migration 20 to create the column - Fixes error when trying to mark messages as failed 2. FOREIGN KEY constraint failed when storing observations - All three agents (SDK, Gemini, OpenRouter) were passing session.contentSessionId instead of session.memorySessionId - storeObservationsAndMarkComplete expects memorySessionId - Added null check and clear error message However, observations still not saving - see investigation report. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * Refactor hook input parsing to improve error handling - Added a nested try-catch block in new-hook.ts, save-hook.ts, and summary-hook.ts to handle JSON parsing errors more gracefully. - Replaced direct error throwing with logging of the error details using logger.error. - Ensured that the process exits cleanly after handling input in all three hooks. * docs: add monolith refactor report with system breakdown Comprehensive analysis of codebase identifying: - 14 files over 500 lines requiring refactoring - 3 critical monoliths (SessionStore, SearchManager, worker-service) - 80% code duplication across agent files - 5-phase refactoring roadmap with domain-based architecture * docs: update monolith report post session-logging merge - SessionStore grew to 2,011 lines (49 methods) - highest priority - SearchManager reduced to 1,778 lines (improved) - Agent files reduced by ~45 lines combined - Added trend indicators and post-merge observations - Core refactoring proposal remains valid * refactor(sqlite): decompose SessionStore into modular architecture Extract the 2011-line SessionStore.ts monolith into focused, single-responsibility modules following grep-optimized progressive disclosure pattern: New module structure: - sessions/ - Session creation and retrieval (create.ts, get.ts, types.ts) - observations/ - Observation storage and queries (store.ts, get.ts, recent.ts, files.ts, types.ts) - summaries/ - Summary storage and queries (store.ts, get.ts, recent.ts, types.ts) - prompts/ - User prompt management (store.ts, get.ts, types.ts) - timeline/ - Cross-entity timeline queries (queries.ts) - import/ - Bulk import operations (bulk.ts) - migrations/ - Database migrations (runner.ts) New coordinator files: - Database.ts - ClaudeMemDatabase class with re-exports - transactions.ts - Atomic cross-entity transactions - Named re-export facades (Sessions.ts, Observations.ts, etc.) Key design decisions: - All functions take `db: Database` as first parameter (functional style) - Named re-exports instead of index.ts for grep-friendliness - SessionStore retained as backward-compatible wrapper - Target file size: 50-150 lines (60% compliance) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(agents): extract shared logic into modular architecture Consolidate duplicate code across SDKAgent, GeminiAgent, and OpenRouterAgent into focused utility modules. Total reduction: 500 lines (29%). New modules in src/services/worker/agents/: - ResponseProcessor.ts: Atomic DB transactions, Chroma sync, SSE broadcast - ObservationBroadcaster.ts: SSE event formatting and dispatch - SessionCleanupHelper.ts: Session state cleanup and stuck message reset - FallbackErrorHandler.ts: Provider error detection for fallback logic - types.ts: Shared interfaces (WorkerRef, SSE payloads, StorageResult) Bug fix: SDKAgent was incorrectly using obs.files instead of obs.files_read and hardcoding files_modified to empty array. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(search): extract search strategies into modular architecture Decompose SearchManager into focused strategy pattern with: - SearchOrchestrator: Coordinates strategy selection and fallback - ChromaSearchStrategy: Vector semantic search via ChromaDB - SQLiteSearchStrategy: Filter-only queries for date/project/type - HybridSearchStrategy: Metadata filtering + semantic ranking - ResultFormatter: Markdown table formatting for results - TimelineBuilder: Chronological timeline construction - Filter modules: DateFilter, ProjectFilter, TypeFilter SearchManager now delegates to new infrastructure while maintaining full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(context): decompose context-generator into modular architecture Extract 660-line monolith into focused components: - ContextBuilder: Main orchestrator (~160 lines) - ContextConfigLoader: Configuration loading - TokenCalculator: Token budget calculations - ObservationCompiler: Data retrieval and query building - MarkdownFormatter/ColorFormatter: Output formatting - Section renderers: Header, Timeline, Summary, Footer Maintains full backward compatibility - context-generator.ts now delegates to new ContextBuilder while preserving public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(worker): decompose worker-service into modular infrastructure Split 2000+ line monolith into focused modules: Infrastructure: - ProcessManager: PID files, signal handlers, child process cleanup - HealthMonitor: Port checks, health polling, version matching - GracefulShutdown: Coordinated cleanup on exit Server: - Server: Express app setup, core routes, route registration - Middleware: Re-exports from existing middleware - ErrorHandler: Centralized error handling with AppError class Integrations: - CursorHooksInstaller: Full Cursor IDE integration (registry, hooks, MCP) WorkerService now acts as thin coordinator wiring all components together. Maintains full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor session queue processing and database interactions - Implement claim-and-delete pattern in SessionQueueProcessor to simplify message handling and eliminate duplicate processing. - Update PendingMessageStore to support atomic claim-and-delete operations, removing the need for intermediate processing states. - Introduce storeObservations method in SessionStore for simplified observation and summary storage without message tracking. - Remove deprecated methods and clean up session state management in worker agents. - Adjust response processing to accommodate new storage patterns, ensuring atomic transactions for observations and summaries. - Remove unnecessary reset logic for stuck messages due to the new queue handling approach. * Add duplicate observation cleanup script Script to clean up duplicate observations created by the batching bug where observations were stored once per message ID instead of once per observation. Includes safety checks to always keep at least one copy. Usage: bun scripts/cleanup-duplicates.ts # Dry run bun scripts/cleanup-duplicates.ts --execute # Delete duplicates bun scripts/cleanup-duplicates.ts --aggressive # Ignore time window 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(sqlite): add comprehensive test suite for SQLite repositories Add 44 tests across 5 test files covering: - Sessions: CRUD operations and schema validation - Observations: creation, retrieval, filtering, and ordering - Prompts: persistence and association with observations - Summaries: generation tracking and session linkage - Transactions: context management and rollback behavior 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(worker): add comprehensive test suites for worker agent modules Add test coverage for response-processor, observation-broadcaster, session-cleanup-helper, and fallback-error-handler agents. Fix type import issues across search module (use `import type` for type-only imports) and update worker-service main module detection for ESM/CJS compatibility. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(search): add comprehensive test suites for search module Add test coverage for the refactored search architecture: - SearchOrchestrator: query coordination and caching - ResultFormatter: pagination, sorting, and field mapping - SQLiteSearchStrategy: database search operations - ChromaSearchStrategy: vector similarity search - HybridSearchStrategy: combined search with score fusion 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(context): add comprehensive test suites for context-generator modules Add test coverage for the modular context-generator architecture: - context-builder.test.ts: Tests for context building and result assembly - observation-compiler.test.ts: Tests for observation compilation with privacy tags - token-calculator.test.ts: Tests for token budget calculations - formatters/markdown-formatter.test.ts: Tests for markdown output formatting 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(infrastructure): add comprehensive test suites for worker infrastructure modules Add test coverage for graceful-shutdown, health-monitor, and process-manager modules extracted during the worker-service refactoring. All 32 tests pass. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(server): add comprehensive test suites for server modules Add test coverage for Express server infrastructure: - error-handler.test.ts: Tests error handling middleware including validation errors, database errors, and async error handling - server.test.ts: Tests server initialization, middleware configuration, and route mounting for all API endpoints 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore(package): add test scripts for modular test suites Add npm run scripts to simplify running tests: - test: run all tests - test:sqlite, test:agents, test:search, test:context, test:infra, test:server 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets * feat(tests): add detailed failure analysis reports for session ID refactor, validation, and store tests - Created reports for session ID refactor test failures, highlighting 8 failures due to design mismatches. - Added session ID usage validation report detailing 10 failures caused by outdated assumptions in tests. - Documented session store test failures, focusing on foreign key constraint violations in 2 tests. - Compiled a comprehensive test suite report summarizing overall test results, including 28 failing tests across various categories. * fix(tests): align session ID tests with NULL-based initialization Update test expectations to match implementation where memory_session_id starts as NULL (not equal to contentSessionId) per architecture decision that memory_session_id must NEVER equal contentSessionId. Changes: - session_id_refactor.test.ts: expect NULL initial state, add updateMemorySessionId() calls - session_id_usage_validation.test.ts: update placeholder detection to check !== null - session_store.test.ts: add updateMemorySessionId() before storeObservation/storeSummary 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix(tests): update GeminiAgent tests with correct field names and mocks - Rename deprecated fields: claudeSessionId → contentSessionId, sdkSessionId → memorySessionId, pendingProcessingIds → pendingMessages - Add missing required ActiveSession fields - Add storeObservations mock (plural) for ResponseProcessor compatibility - Fix settings mock to use correct CLAUDE_MEM_GEMINI_RATE_LIMITING_ENABLED key - Add await to rejects.toThrow assertion 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat(tests): add logger imports and fix coverage test exclusions Phase 3 of test suite fixes: - Add logger imports to 34 high-priority source files (SQLite, worker, context) - Exclude CLI-facing files from console.log check (worker-service.ts, integrations/*Installer.ts) as they use console.log intentionally for interactive user output 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * docs: update SESSION_ID_ARCHITECTURE for NULL-based initialization Update documentation to reflect that memory_session_id starts as NULL, not as a placeholder equal to contentSessionId. This matches the implementation decision that memory_session_id must NEVER equal contentSessionId to prevent injecting memory messages into user transcripts. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore(deps): update esbuild and MCP SDK - esbuild: 0.25.12 → 0.27.2 (fixes minifyIdentifiers issue) - @modelcontextprotocol/sdk: 1.20.1 → 1.25.1 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets and updates * chore: remove bun.lock and add to gitignore 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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|
Alex Newman
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2fc4153bef |
refactor: decompose monolithic services into modular architecture (#534)
* docs: add monolith refactor report with system breakdown Comprehensive analysis of codebase identifying: - 14 files over 500 lines requiring refactoring - 3 critical monoliths (SessionStore, SearchManager, worker-service) - 80% code duplication across agent files - 5-phase refactoring roadmap with domain-based architecture * fix: prevent memory_session_id from equaling content_session_id The bug: memory_session_id was initialized to contentSessionId as a "placeholder for FK purposes". This caused the SDK resume logic to inject memory agent messages into the USER's Claude Code transcript, corrupting their conversation history. Root cause: - SessionStore.createSDKSession initialized memory_session_id = contentSessionId - SDKAgent checked memorySessionId !== contentSessionId but this check only worked if the session was fetched fresh from DB The fix: - SessionStore: Initialize memory_session_id as NULL, not contentSessionId - SDKAgent: Simple truthy check !!session.memorySessionId (NULL = fresh start) - Database migration: Ran UPDATE to set memory_session_id = NULL for 1807 existing sessions that had the bug Also adds [ALIGNMENT] logging across the session lifecycle to help debug session continuity issues: - Hook entry: contentSessionId + promptNumber - DB lookup: contentSessionId → memorySessionId mapping proof - Resume decision: shows which memorySessionId will be used for resume - Capture: logs when memorySessionId is captured from first SDK response UI: Added "Alignment" quick filter button in LogsModal to show only alignment logs for debugging session continuity. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: improve error handling in worker-service.ts - Fix GENERIC_CATCH anti-patterns by logging full error objects instead of just messages - Add [ANTI-PATTERN IGNORED] markers for legitimate cases (cleanup, hot paths) - Simplify error handling comments to be more concise - Improve httpShutdown() error discrimination for ECONNREFUSED - Reduce LARGE_TRY_BLOCK issues in initialization code Part of anti-pattern cleanup plan (132 total issues) * refactor: improve error logging in SearchManager.ts - Pass full error objects to logger instead of just error.message - Fixes PARTIAL_ERROR_LOGGING anti-patterns (10 instances) - Better debugging visibility when Chroma queries fail Part of anti-pattern cleanup (133 remaining) * refactor: improve error logging across SessionStore and mcp-server - SessionStore.ts: Fix error logging in column rename utility - mcp-server.ts: Log full error objects instead of just error.message - Improve error handling in Worker API calls and tool execution Part of anti-pattern cleanup (133 remaining) * Refactor hooks to streamline error handling and loading states - Simplified error handling in useContextPreview by removing try-catch and directly checking response status. - Refactored usePagination to eliminate try-catch, improving readability and maintaining error handling through response checks. - Cleaned up useSSE by removing unnecessary try-catch around JSON parsing, ensuring clarity in message handling. - Enhanced useSettings by streamlining the saving process, removing try-catch, and directly checking the result for success. * refactor: add error handling back to SearchManager Chroma calls - Wrap queryChroma calls in try-catch to prevent generator crashes - Log Chroma errors as warnings and fall back gracefully - Fixes generator failures when Chroma has issues - Part of anti-pattern cleanup recovery * feat: Add generator failure investigation report and observation duplication regression report - Created a comprehensive investigation report detailing the root cause of generator failures during anti-pattern cleanup, including the impact, investigation process, and implemented fixes. - Documented the critical regression causing observation duplication due to race conditions in the SDK agent, outlining symptoms, root cause analysis, and proposed fixes. * fix: address PR #528 review comments - atomic cleanup and detector improvements This commit addresses critical review feedback from PR #528: ## 1. Atomic Message Cleanup (Fix Race Condition) **Problem**: SessionRoutes.ts generator error handler had race condition - Queried messages then marked failed in loop - If crash during loop → partial marking → inconsistent state **Solution**: - Added `markSessionMessagesFailed()` to PendingMessageStore.ts - Single atomic UPDATE statement replaces loop - Follows existing pattern from `resetProcessingToPending()` **Files**: - src/services/sqlite/PendingMessageStore.ts (new method) - src/services/worker/http/routes/SessionRoutes.ts (use new method) ## 2. Anti-Pattern Detector Improvements **Problem**: Detector didn't recognize logger.failure() method - Lines 212 & 335 already included "failure" - Lines 112-113 (PARTIAL_ERROR_LOGGING detection) did not **Solution**: Updated regex patterns to include "failure" for consistency **Files**: - scripts/anti-pattern-test/detect-error-handling-antipatterns.ts ## 3. Documentation **PR Comment**: Added clarification on memory_session_id fix location - Points to SessionStore.ts:1155 - Explains why NULL initialization prevents message injection bug ## Review Response Addresses "Must Address Before Merge" items from review: ✅ Clarified memory_session_id bug fix location (via PR comment) ✅ Made generator error handler message cleanup atomic ❌ Deferred comprehensive test suite to follow-up PR (keeps PR focused) ## Testing - Build passes with no errors - Anti-pattern detector runs successfully - Atomic cleanup follows proven pattern from existing methods 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: FOREIGN KEY constraint and missing failed_at_epoch column Two critical bugs fixed: 1. Missing failed_at_epoch column in pending_messages table - Added migration 20 to create the column - Fixes error when trying to mark messages as failed 2. FOREIGN KEY constraint failed when storing observations - All three agents (SDK, Gemini, OpenRouter) were passing session.contentSessionId instead of session.memorySessionId - storeObservationsAndMarkComplete expects memorySessionId - Added null check and clear error message However, observations still not saving - see investigation report. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * Refactor hook input parsing to improve error handling - Added a nested try-catch block in new-hook.ts, save-hook.ts, and summary-hook.ts to handle JSON parsing errors more gracefully. - Replaced direct error throwing with logging of the error details using logger.error. - Ensured that the process exits cleanly after handling input in all three hooks. * docs: update monolith report post session-logging merge - SessionStore grew to 2,011 lines (49 methods) - highest priority - SearchManager reduced to 1,778 lines (improved) - Agent files reduced by ~45 lines combined - Added trend indicators and post-merge observations - Core refactoring proposal remains valid * refactor(sqlite): decompose SessionStore into modular architecture Extract the 2011-line SessionStore.ts monolith into focused, single-responsibility modules following grep-optimized progressive disclosure pattern: New module structure: - sessions/ - Session creation and retrieval (create.ts, get.ts, types.ts) - observations/ - Observation storage and queries (store.ts, get.ts, recent.ts, files.ts, types.ts) - summaries/ - Summary storage and queries (store.ts, get.ts, recent.ts, types.ts) - prompts/ - User prompt management (store.ts, get.ts, types.ts) - timeline/ - Cross-entity timeline queries (queries.ts) - import/ - Bulk import operations (bulk.ts) - migrations/ - Database migrations (runner.ts) New coordinator files: - Database.ts - ClaudeMemDatabase class with re-exports - transactions.ts - Atomic cross-entity transactions - Named re-export facades (Sessions.ts, Observations.ts, etc.) Key design decisions: - All functions take `db: Database` as first parameter (functional style) - Named re-exports instead of index.ts for grep-friendliness - SessionStore retained as backward-compatible wrapper - Target file size: 50-150 lines (60% compliance) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(agents): extract shared logic into modular architecture Consolidate duplicate code across SDKAgent, GeminiAgent, and OpenRouterAgent into focused utility modules. Total reduction: 500 lines (29%). New modules in src/services/worker/agents/: - ResponseProcessor.ts: Atomic DB transactions, Chroma sync, SSE broadcast - ObservationBroadcaster.ts: SSE event formatting and dispatch - SessionCleanupHelper.ts: Session state cleanup and stuck message reset - FallbackErrorHandler.ts: Provider error detection for fallback logic - types.ts: Shared interfaces (WorkerRef, SSE payloads, StorageResult) Bug fix: SDKAgent was incorrectly using obs.files instead of obs.files_read and hardcoding files_modified to empty array. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(search): extract search strategies into modular architecture Decompose SearchManager into focused strategy pattern with: - SearchOrchestrator: Coordinates strategy selection and fallback - ChromaSearchStrategy: Vector semantic search via ChromaDB - SQLiteSearchStrategy: Filter-only queries for date/project/type - HybridSearchStrategy: Metadata filtering + semantic ranking - ResultFormatter: Markdown table formatting for results - TimelineBuilder: Chronological timeline construction - Filter modules: DateFilter, ProjectFilter, TypeFilter SearchManager now delegates to new infrastructure while maintaining full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(context): decompose context-generator into modular architecture Extract 660-line monolith into focused components: - ContextBuilder: Main orchestrator (~160 lines) - ContextConfigLoader: Configuration loading - TokenCalculator: Token budget calculations - ObservationCompiler: Data retrieval and query building - MarkdownFormatter/ColorFormatter: Output formatting - Section renderers: Header, Timeline, Summary, Footer Maintains full backward compatibility - context-generator.ts now delegates to new ContextBuilder while preserving public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(worker): decompose worker-service into modular infrastructure Split 2000+ line monolith into focused modules: Infrastructure: - ProcessManager: PID files, signal handlers, child process cleanup - HealthMonitor: Port checks, health polling, version matching - GracefulShutdown: Coordinated cleanup on exit Server: - Server: Express app setup, core routes, route registration - Middleware: Re-exports from existing middleware - ErrorHandler: Centralized error handling with AppError class Integrations: - CursorHooksInstaller: Full Cursor IDE integration (registry, hooks, MCP) WorkerService now acts as thin coordinator wiring all components together. Maintains full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor session queue processing and database interactions - Implement claim-and-delete pattern in SessionQueueProcessor to simplify message handling and eliminate duplicate processing. - Update PendingMessageStore to support atomic claim-and-delete operations, removing the need for intermediate processing states. - Introduce storeObservations method in SessionStore for simplified observation and summary storage without message tracking. - Remove deprecated methods and clean up session state management in worker agents. - Adjust response processing to accommodate new storage patterns, ensuring atomic transactions for observations and summaries. - Remove unnecessary reset logic for stuck messages due to the new queue handling approach. * Add duplicate observation cleanup script Script to clean up duplicate observations created by the batching bug where observations were stored once per message ID instead of once per observation. Includes safety checks to always keep at least one copy. Usage: bun scripts/cleanup-duplicates.ts # Dry run bun scripts/cleanup-duplicates.ts --execute # Delete duplicates bun scripts/cleanup-duplicates.ts --aggressive # Ignore time window 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> --------- Co-authored-by: Claude <noreply@anthropic.com> |