Commit Graph

64 Commits

Author SHA1 Message Date
Alex Newman 39f1102600 fix: remove ONNX/OpenBLAS thread cap from chroma-mcp spawn env
The 2-thread cap was a bandaid for #2220 (Windows) and #2253 (macOS Intel)
CPU runaway reports on v12.4.9. The actual root causes (watermark stuck
at 0 → continuous re-embed, orphan process trees, fire-and-forget backfill
across 80+ projects) were fixed structurally in #2282: per-batch watermark
persistence, killProcessTree() + pgid registration, max-3 concurrent
backfills with re-entrancy guard, kernel-enforced child cleanup (#2216).

With the structural fixes in place, capping ONNX/OpenBLAS/MKL at 2 threads
slows initial backfill 3–6× on multi-core machines and provides no
steady-state benefit. Defer to the OS scheduler and the user's environment.

ANONYMIZED_TELEMETRY=false stays — unrelated to the storm, blocks
background HTTP from the embedding subprocess.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-04 13:08:53 -07:00
Alex Newman d384d3c595 fix: bug-batch — 17 issues + 4 foundations (chroma, opencode, parser, OAuth, paths, uptime, classification) (#2282)
* feat: foundations F1-F4 + simple bug fixes

Foundations (no consumer adoption yet):
- F1 spawnHidden wrapper at src/shared/spawn.ts
- F2 paths namespace with 18 accessors + invariant test (tests/shared/paths.test.ts)
- F3 getUptimeSeconds at src/shared/uptime.ts
- F4 ClassifiedProviderError at src/services/worker/provider-errors.ts + 6 tests

Issue fixes (file-isolated, parallel-safe):
- #2231: SECURITY.md at repo root for GitHub Security tab
- #2240: dedupe observationIds before Chroma sync (ResponseProcessor.ts)
- #2247: add task_complete to Codex session-end events
- #2243: rsync excludes scripts/package.json + scripts/node_modules

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: validate Claude executable with --version and detect desktop app

Extract findClaudeExecutable() into shared utility used by both
SDKAgent and KnowledgeAgent (deduplication). Every candidate is now
validated with --version (3s timeout). Desktop app executables in
AppData/Program Files get an actionable error message directing
users to install the CLI via npm.

Closes #2222

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: use Zod schemas in OpenCode plugin to fix _zod.def crash

OpenCode 1.14.x walks arg._zod.def at plugin registration, which
crashes on plain JSON Schema objects like {type: "string"}. Replace
with z.string().describe() so the Zod internals are present.

Closes #2226, #2225, #2154

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: neutralize chroma-mcp CPU storm at the root

Two surgical fixes to the chroma backfill path that together cause the
sustained 60–80% CPU + orphan accumulation pattern reported across

1. ChromaMcpManager.getSpawnEnv: cap embedding-thread fanout
   ONNX Runtime / OpenBLAS / MKL all default to cpu_count(), so a 12-core
   machine spins 12 threads burning embeddings concurrently. The user's
   getSpawnEnv only handled SSL certs — no thread limits at all. Inject
   OMP_NUM_THREADS / ONNX_NUM_THREADS / OPENBLAS_NUM_THREADS / MKL_NUM_THREADS
   defaults of 2 (only if user hasn't pinned them), and
   ANONYMIZED_TELEMETRY=false to stop background HTTP from the embedding
   subprocess. Closes the storm at the source.

2. ChromaSync.backfill{Observations,Summaries,Prompts}: per-batch watermark
   The bump was in a trailing finally block. SIGKILL / OOM / power loss
   mid-flight skips finally entirely, so the watermark stayed at 0 and the
   next worker boot re-embedded the entire history (16K obs in #2220's
   case), which then pegged CPU forever in combination with (1). Move the
   bump inside the loop so progress is durable per batch.
   Closes #2214.

Verification:
- 26/26 chroma tests pass (tests/services/sync, tests/integration/chroma-vector-sync)
- Bundle confirms thread caps and per-batch bumps are present
- Full suite: 1429 pass / 20 fail — pre-existing failures only, no
  regression vs v12.4.9 baseline (1429 pass / 27 fail)

Closes #2214.
Substantially de-amplifies #2220 (the structural Job-Object cleanup is
still tracked separately at #2216).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: kill chroma-mcp process tree and limit backfill concurrency

Three fixes for orphan chroma-mcp processes and resource exhaustion:

1. killProcessTree() in ChromaMcpManager.stop() tears down the full
   uvx->uv->python->chroma-mcp spawn chain (pkill -P on POSIX,
   taskkill /T on Windows) before MCP client.close().

2. Register chroma process with pgid for supervisor shutdown cascade.

3. backfillAllProjects() now processes max 3 projects concurrently
   with a re-entrancy guard to prevent overlapping fire-and-forget runs.

Closes #2216, advances #2220, #2213

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* build: regenerate plugin artifacts after cherry-picks

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat: foundation consumers + Cursor/stdin/queue/docs fixes

F1 spawnHidden adoption (#2236):
- 8 spawn → spawnHidden conversions across worker-utils, ProcessManager,
  npx-cli (install/runtime), supervisor/process-registry

F3 getUptimeSeconds adoption (#2250):
- Server.ts:165 (THE BUG: returned ms)
- Server.ts:270, SessionRoutes.ts:326 (4th ms-bug consumer found),
  DataRoutes.ts:225 (refactor for consistency)

#2188 stdin '{}' fallback removal:
- Diagnostic logging to <DATA_DIR>/logs/runner-errors.log + CAPTURE_BROKEN
  marker; exit 0 to preserve Windows Terminal exit-code strategy

#2196 ANTHROPIC_BASE_URL docs:
- New docs/public/configuration/custom-anthropic-backends.mdx
- Note: issue may need separate auto-detect feature; docs document
  existing plumbing only

#2242 check-pending-queue endpoints:
- Point at /api/processing-status + /api/processing per DataRoutes.ts;
  honor CLAUDE_MEM_WORKER_PORT env

#2248 Cursor sessions never summarized:
- Pulled reporter wbingli's tested fix (commit 46eaba44)
- Bug A: cursor adapter now derives transcriptPath from cwd+sessionId
- Bug B: parser accepts both line.type and line.role
- Bug C: walk backward, prefer non-empty text, fallback to empty
- Tests: 10-case regression suite + tests/fixtures/cursor-session.jsonl

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat: F2 paths namespace adoption (#2237 + #2238)

Replaced 24 hardcoded homedir() + '.claude-mem' sites across 18 source
files with paths.<accessor>() calls from src/shared/paths.ts.

Accessors used: dataDir, workerPid, settings, database, chroma,
combinedCerts, transcriptsConfig, transcriptsState, corpora,
supervisorRegistry, envFile, logsDir.

Sites converted (file:area):
- src/cli/claude-md-commands.ts (database)
- src/services/context/ContextConfigLoader.ts (settings)
- src/services/infrastructure/ProcessManager.ts (workerPid)
- src/services/infrastructure/WorktreeAdoption.ts (settings)
- src/services/integrations/CodexCliInstaller.ts (settings)
- src/services/sync/ChromaMcpManager.ts (chroma + combinedCerts)
- src/services/transcripts/config.ts (transcriptsConfig + transcriptsState)
- src/services/worker/ClaudeProvider.ts (envFile)
- src/services/worker/GeminiProvider.ts (envFile + 2 more)
- src/services/worker/http/routes/DataRoutes.ts (dataDir)
- src/services/worker/http/routes/SettingsRoutes.ts (settings + envFile)
- src/services/worker/knowledge/CorpusStore.ts (corpora)
- src/shared/EnvManager.ts (envFile)
- src/supervisor/index.ts (supervisorRegistry)
- src/supervisor/process-registry.ts (supervisorRegistry)
- src/supervisor/shutdown.ts (supervisorRegistry)
- src/utils/claude-md-utils.ts (database)
- src/utils/logger.ts (logsDir + settings, lazy to avoid cycle)

CLAUDE_MEM_DATA_DIR override now flows through 100% of the worker
runtime; no per-file env reads needed.

Verification:
- Grep guard: zero homedir+'.claude-mem' sites remain in src/
  (excluding paths.ts itself and SettingsDefaultsManager.ts)
- F2 invariant test: 3/3 pass (60 expects)
- Foundation tests: 19/19 pass

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat: F4 provider classification + parser fence + OAuth keychain

F4 adoption (#2244 + #2254):
- Per-provider classifiers: classifyClaudeError, classifyGeminiError,
  classifyOpenRouterError. Each lives in the provider file.
- New retry helper at src/services/worker/retry.ts: withRetry() honors
  ClassifiedProviderError.kind; retriable=transient/rate_limit (with
  retryAfterMs); not retriable=unrecoverable/auth_invalid/quota_exhausted.
  maxRetries=2, perAttemptTimeout=30s, exponential backoff with jitter.
- GeminiProvider + OpenRouterProvider fetch calls wrapped with retry.
  Best-effort request-id capture (x-goog-request-id, x-request-id,
  x-openrouter-request-id) for dedup logging.
- Deleted unrecoverablePatterns allowlist at worker-service.ts:540 area;
  worker dispatches on err.kind instead.
- 28 new classifier tests at tests/worker/provider-classifiers.test.ts:
  429-no-Retry-After, 500-with-quota-exceeded, OverloadedError,
  per-provider auth_invalid signals.

#2233 Part A — parser fence handling:
- src/sdk/prompts.ts: removed 4 fence markers from XML example blocks.
  Model now sees plain XML, eliminating the failure-mode that drained
  quota via repeated retries.
- src/sdk/parser.ts: stripCodeFences() at top, called before
  parseAgentXml. Fence-tolerant regardless of model behavior.
- TODO comment references #2233 Part B (tool-use migration as separate
  scope).
- 4 fence-tolerance tests added to tests/sdk/parser.test.ts.

#2215 OAuth token keychain:
- New src/shared/oauth-token.ts (~360 LOC): readClaudeOAuthToken()
  reads from platform-native credential stores at worker spawn-time.
  - macOS: security find-generic-password -s "Claude Code-credentials"
  - Windows: PowerShell wrapper around CredRead (Win32 Advapi32.dll)
  - Linux: secret-tool lookup
  - Fallback: env CLAUDE_CODE_OAUTH_TOKEN with JWT exp claim or sidecar
    expiresAt validation; refuses stale-token injection.
- EnvManager.buildIsolatedEnvWithFreshOAuth() (async) replaces silent
  process.env copy. Empty injection on absent; marker write on expired.
- <DATA_DIR>/oauth-stale.marker surfaces "re-login via Claude Desktop"
  via existing SessionStart additionalContext mechanism (context.ts).
- ClaudeProvider.startSession + KnowledgeAgent.prime/executeQuery now
  await the async env builder.
- 17 oauth-token tests covering decodeJwtExpMs, marker round-trip,
  env-fallback expiry detection.

Verification:
- npx tsc --noEmit: only pre-existing bun-types error
- bun test (foundations + new): 70 pass, 0 new fails (8 fails are
  pre-existing parser.test.ts cases unrelated to fence work)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat: #2234 quota-aware wall-clock guard

New src/services/worker/RateLimitStore.ts (207 LOC) — vendor pattern from
meridian/rateLimitStore.ts (MIT, copied not depended).

API:
- class RateLimitStore: set/get/getAll/getMostRecentByWindow/size/clear,
  in-memory last-write-wins keyed by rateLimitType.
- globalRateLimitStore singleton.
- shouldAbortForQuota(authMethod, store, now?) → {abort, reason?, window?}
- isApiKeyAuth(authMethod): matches both verbose getAuthMethodDescription
  strings and concise "api_key".

Thresholds (auth-type gated):
- api_key: never aborts (user authorized per-call spend).
- cli/oauth/subscription:
  - five_hour utilization >= 0.95 OR resetsAt within 15min (with 0.85
    utilization floor to avoid false trip on freshly-reset windows)
  - seven_day_opus >= 0.93
  - seven_day_sonnet >= 0.92
  - seven_day >= 0.93
  - overage >= 0.95

ClaudeProvider integration (line 198, for-await loop):
- Detects message.type === 'system' && subtype === 'rate_limit'
- Records rate_limit_info via globalRateLimitStore.set
- Calls shouldAbortForQuota(authMethod, globalRateLimitStore)
- On abort: session.abortReason = 'quota:<window>', abortController.abort,
  break out of loop. Worker continues other sessions.

Health endpoint (Server.ts:174):
- New rateLimits field on /api/health from getMostRecentByWindow().
- Field shape: {five_hour?, seven_day?, seven_day_opus?, seven_day_sonnet?,
  overage?} each carrying utilization, status, resetsAt, observedAt.

Tests (tests/worker/rate-limit-store.test.ts):
- 22 cases covering store CRUD, isApiKeyAuth, abort decision matrix.
- api_key never aborts at any utilization.
- cli aborts at threshold breaches per window.
- Reset-grace buffer with utilization floor.

Verification:
- npx tsc --noEmit: only pre-existing bun error
- bun test tests/worker/rate-limit-store.test.ts: 22/22 pass
- bun test tests/claude-provider-resume.test.ts: 9/9 pass
- bun test tests/server/: 44/44 pass

Plugin artifacts regenerated.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* build: regenerate worker-service.cjs after final build-and-sync

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test: align test assertions with F4 classification + timeout

Two test fixes for branch-introduced regressions vs main:

1. tests/gemini_provider.test.ts "should throw on other errors":
   F4's classifyGeminiError replaced upstream Error message with
   ClassifiedProviderError. Test was pinned to pre-F4 string.
   Updated assertion to match new "Gemini bad request (status 400)".

2. tests/infrastructure/graceful-shutdown.test.ts:
   Test pokes real ~/.claude-mem/supervisor.json registry which on a
   developer machine contains live worker + chroma-mcp PIDs. SIGTERM →
   wait → SIGKILL cascade takes ~6s end-to-end. Bumped per-test timeout
   to 15000ms. Underlying shutdown code unchanged. Future cleanup
   should mock getSupervisor() here.

Result: branch failure count == main (77 pre-existing failures).
No new regressions from this branch's work.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: address 4 Greptile P1/P2 findings on PR #2282

P1 (real bug): clearStaleMarker silently broken in ESM
- src/shared/oauth-token.ts:14: add unlinkSync to top-level fs import
- src/shared/oauth-token.ts:342: drop inline require('fs'), call
  unlinkSync directly. ESM has no require, so the previous code threw
  ReferenceError swallowed by try/catch — making clearStaleMarker a
  permanent no-op. Stale oauth marker would persist indefinitely after
  Claude Desktop refreshed the token.

P2 (security): execSync shell-string interpolation
- src/shared/find-claude-executable.ts:39: execSync(`"${candidate}"
  --version`) → execFileSync(candidate, ['--version']). Path containing
  ", ;, & — reachable on Windows via crafted CLAUDE_CODE_PATH in
  settings.json — would otherwise produce a malformed/exploitable
  command.

P2 (security): PowerShell username injection
- src/shared/oauth-token.ts:119: userInfo().username escaped with PS
  single-quote convention (' → '') before interpolation into
  `'Claude Code-credentials:${user}'`. Defensive against future Windows
  versions or domain-joined machines that may permit ' in usernames.

P2 (style): Unreachable throw lastError post-loop
- src/services/worker/retry.ts:109: explained as the safety net for
  opts.maxRetries < 0 (pathological input where the loop never executes
  and lastError is undefined). Annotated with comment + descriptive
  fallback Error so the dead-looking code is now self-documenting.

Verification:
- npx tsc --noEmit: clean (only pre-existing bun-types error)
- bun test tests/shared/oauth-token.test.ts tests/worker/provider-classifiers.test.ts
  tests/worker/provider-errors.test.ts: 50 pass / 0 fail

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: tighten SECURITY.md data-flow and audit dates

Fixes CodeRabbit comments #3178957249 (Data Storage section overstated
"no external transmission" — softened to call out Claude Agent SDK,
alternate provider, Chroma MCP, OAuth keychain, and registry fetches)
and #3178957250 (Next Scheduled Audit was earlier than Last Updated;
bumped Last Updated to 2026-05-03 and audit to 2026-09-16) on PR #2282.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: drop inline require('fs') in paths.ts

Fixes CodeRabbit outside-diff comment on src/shared/paths.ts:25-29 from
PR #2282 review. resolveDataDir() ran require('fs') inside an ESM module
(this file uses import.meta.url and .js imports), which can break in
strict ESM environments. readFileSync now imports at the top alongside
existsSync/mkdirSync.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: block CLAUDE_CODE_OAUTH_TOKEN from parent env (issue #2215)

Fixes CodeRabbit outside-diff comment on src/shared/EnvManager.ts:14-17
from PR #2282 review. The OAuth-token leak fix was bypassed because
buildIsolatedEnv() copied every parent env var that wasn't in
BLOCKED_ENV_VARS, but CLAUDE_CODE_OAUTH_TOKEN was not blocked. A stale
parent token therefore still reached isolatedEnv even when the fresh
keychain read returned expired/absent — defeating the fix documented
inline at lines 178-183.

Adds CLAUDE_CODE_OAUTH_TOKEN to BLOCKED_ENV_VARS and defensively deletes
it again at the top of buildIsolatedEnvWithFreshOAuth() so the
fresh-spawn-time read is the only path that can populate it.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: validate cursor sessionId against path traversal

Fixes CodeRabbit comment #3178957252 on PR #2282. The Cursor adapter
took sessionId straight from stdin and concatenated it into a
join(homedir(), '.cursor', 'projects', ..., sessionId, ...) path. A
crafted value containing path separators or '..' segments could escape
~/.cursor/projects, and the later transcript read would then probe
arbitrary local files.

deriveCursorTranscriptPath() now rejects any sessionId that doesn't
match /^[A-Za-z0-9_-]+$/ — Cursor's real session ids are UUID-style
identifiers, so the safe whitelist is non-disruptive.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: scope stripCodeFences() to full-wrapper payloads only

Fixes CodeRabbit comment #3178957253 on PR #2282. The previous regex
greedily removed the first opening and last closing triple-backticks
anywhere in the input, which could mangle valid content with internal
fenced examples or surrounding prose — and ran before XML parsing so
it created false negatives.

stripCodeFences() now only strips when the entire payload is a single
fenced block (start-to-end, with optional language tag and surrounding
whitespace), capturing the inner content. Adds a regression test that
feeds prose with internal triple-backtick markers around a real
<observation> block and asserts the inner ``` are preserved.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: honor abortSignal during retry backoff sleep

Fixes CodeRabbit comment #3178957263 on PR #2282. The retry helper used
an unconditional `setTimeout` Promise for backoff between attempts, so
an external abort that fired during the wait was delayed until the
timer completed.

The backoff now races setTimeout against opts.abortSignal: if the signal
flips, the timer is cleared and the Promise rejects with 'Aborted'
immediately. The abort listener is registered with { once: true } and
removed when the timer fires to avoid leaks.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: abort immediately on provider-side rejected status

Fixes CodeRabbit comment #3178957261 on PR #2282. shouldAbortForQuota()
only checked utilization thresholds and reset-grace heuristics; a
snapshot with status='rejected' (or overageStatus='rejected' on the
overage window) but no utilization number could still return
{ abort: false }, letting the worker keep consuming after the provider
had already declared the bucket exhausted.

Provider-side rejection is now checked before utilization. When either
rejection signal is present the guard returns abort=true with reason
"quota:<window> rejected by provider".

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: only bump Chroma watermark on confirmed batch writes

Fixes CodeRabbit comments #3178957259 (watermark advances on swallowed
batch failures) and #3178957260 (backfillInProgress can stick true if
init throws) on PR #2282.

addDocuments() previously logged and swallowed per-batch failures with a
void return type, so all three backfill loops (observations, summaries,
prompts) bumped the watermark unconditionally after the call —
turning a transient Chroma failure into permanently-skipped records.
addDocuments() now returns the count of documents that actually landed
(including delete+add reconcile retries), and each loop only advances
the watermark when the batch wrote successfully. Failed batches log a
debug message and continue so the loop still gets through the rest.

backfillAllProjects() now constructs SessionStore and ChromaSync inside
a try block so a constructor throw can't leave the static
backfillInProgress guard stuck true and silently skip every later
backfill. The finally always clears the guard and best-effort closes
each resource.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: fall back to pid kill when process group is gone

Fixes CodeRabbit outside-diff comment on src/supervisor/shutdown.ts:118-134
from PR #2282 review. signalProcess() returned silently when a pgid was
present and process.kill(-pgid, signal) threw ESRCH, never attempting
the per-pid signal. With the new chroma registration path that records a
pgid alongside the pid, an already-collapsed group could turn shutdown
into a no-op even though the root pid was still alive.

The POSIX branch now tries -pgid first when present, and on ESRCH falls
through to process.kill(pid, signal). Non-ESRCH errors still propagate.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: settings path, uptime clamp, fetch timeouts

Fixes three smaller CodeRabbit issues on PR #2282:

- SettingsRoutes (outside-diff #2282 review on lines 65-79): the
  parse-error response told users to delete ~/.claude-mem/settings.json
  even when paths.settings() resolved elsewhere. Now uses the resolved
  settingsPath variable in the message.

- uptime.ts (#3178957264 / lines 2-3): getUptimeSeconds() could return
  a negative value if startedAtMs was in the future or the system clock
  moved backward. Clamps with Math.max(0, ...) so health endpoints
  never see negative seconds.

- check-pending-queue.ts (#3178957248 / lines 27-45): checkWorkerHealth,
  getProcessingStatus and triggerProcessing all called fetch with no
  timeout, so the script could block forever if the worker accepted the
  TCP connection but never responded. Wraps each fetch with an
  AbortController + 10s timeout that throws a clear timeout message.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: walk descendants recursively when killing chroma-mcp tree

Fixes CodeRabbit comment #3178957258 on PR #2282. The POSIX teardown in
ChromaMcpManager.killProcessTree() relied on `pkill -P <pid>`, which
only signals direct children. Under uv, chroma-mcp spawns python as a
grandchild — when uv exits and python re-parents to init, pkill -P
never reaches it and the descendant survives the "tree kill".

killProcessTree() now collects the full descendant set via a recursive
`pgrep -P` walk before each signal phase. The walk returns leaves first
so signals propagate bottom-up (SIGTERM children before their parents,
then again for SIGKILL after the 500ms grace window so any layer that
re-parented during teardown still gets cleaned up). pgrep failures
(no children, missing binary) return [] so this stays best-effort and
falls back to the existing per-pid signal.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: tolerate malformed JSONL lines in transcript-parser

Fixes Greptile P1 comment 3178964456 on PR #2282.

extractLastMessageFromJsonl previously called JSON.parse(rawLine) with no
guard. A truncated/malformed JSONL line — common when a transcript was
crashed mid-write or partially flushed — would throw SyntaxError, crash
the summarization pipeline for that session, and silently lose all
prior valid messages.

Fix: wrap JSON.parse in try/catch and skip bad lines. The empty-line
guard only catches truly empty strings, not malformed fragments.

Regression tests added for two cases:
- Mixed valid + truncated lines: returns last valid match.
- All lines malformed: returns empty string (no throw).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: classify FK constraint failures BEFORE provider classifier

Fixes Greptile P1 comment 3178979583 on PR #2282.

The F4 #2244 work introduced a regression: reclassifyAtDispatch always
returns a non-null ClassifiedProviderError for known agent types
(Claude/Gemini/OpenRouter), so the isFkConstraintFailure branch was dead
code. Per-provider classifiers don't recognize "FOREIGN KEY constraint
failed", so SQLite FK failures fell through to the default 'transient'
kind and would retry indefinitely — restart loop on corrupted session
DB state.

Old unrecoverablePatterns explicitly listed FK constraint as
unrecoverable; restoring that semantic by checking FK FIRST and only
deferring to the classifier when not an FK error.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: validate CLAUDE_MEM_WORKER_PORT in check-pending-queue

Parse the env var, range-check (1-65535), and fall back to 37777 with a
console.warn on invalid input instead of letting a malformed value flow
into the URL builder unchecked (CodeRabbit Minor on PR #2282).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: SIGKILL union of pre-TERM and post-wait descendant sets

When the chroma-mcp root exits during the SIGTERM grace window, its
descendants get re-parented to init and drop out of the post-wait
pgrep -P scan. Without including the pre-TERM snapshot, those
re-parented PIDs would never receive SIGKILL even though they were
definitely children before SIGTERM and may still be alive (CodeRabbit
Major on PR #2282).

Compute Array.from(new Set([...descendantsBeforeTerm, ...descendantsBeforeKill]))
and SIGKILL the union. The two sets typically overlap, so dedupe is
required.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: enforce addDocuments return-count in direct sync paths

syncObservation/syncSummary/syncUserPrompt now capture the written count
from addDocuments() and only bump the watermark when every requested
document landed in Chroma. addDocuments() tolerates per-batch failures
(returns the actual written count), so the previous unconditional bump
was silently marking unsynced rows as synced on transient errors —
preventing the next backfill from retrying them (CodeRabbit Major on PR
#2282).

A partial write now logs a warn with the (requested, written) pair and
preserves retryability on the next pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: guard backfill watermark against non-contiguous failures

The backfill watermark is a single monotonic id, so it cannot represent
sparse success: "synced through 200, gap at 201–250, then 251 onward"
would, on restart, skip 201–250 forever because the watermark sat at
either 200 or 251 — both lose data (CodeRabbit Major on PR #2282).

Add a per-loop hadGap flag to backfillObservations / backfillSummaries /
backfillPrompts. Once any batch under-writes, every subsequent batch
must also skip the bump, regardless of whether it itself succeeded.
Also tighten the failure check from `writtenInBatch <= 0` to
`writtenInBatch < batch.length` so partial-batch writes are caught.

The watermark stays at the last contiguously-synced position; the next
backfill pass retries from there, eventually closing the gap.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: clear oauth-stale marker when token is absent

When an OAuth token disappears entirely (user logs out, keychain
cleared), buildIsolatedEnvWithFreshOAuth's absent branch was leaving any
prior stale-marker file in place. The session-start hook would then keep
surfacing an "expired token, re-login" warning even though the token is
no longer expired — it's gone, and re-login was already done elsewhere
or not applicable (CodeRabbit Minor on PR #2282).

Call clearStaleMarker() in the absent branch the same way the present
branch already does. Add a regression test exercising the full
buildIsolatedEnvWithFreshOAuth path: pre-write a marker, force absent
via spoofed unsupported platform, assert the marker is gone after.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: skip unknown message.content shapes instead of throwing

extractLastMessageFromJsonl already tolerates malformed JSONL lines
(JSON.parse failure -> continue), but a valid JSON line whose
message.content is an unexpected type (null, number, plain object) was
still throwing — contradicting the new tolerance and crashing the entire
summary pipeline on a single weird line (CodeRabbit Major + Greptile P1
on PR #2282).

Replace the `throw new Error(...)` with `continue` so a single bad
content shape skips that line instead of failing the whole transcript
read. Forward compat: future content schemas land harmlessly.

Add regression tests covering null, number, and plain-object content;
each must not throw and must fall back to the most recent valid line.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* review: guard null/primitive entries in message.content array

Fixes CodeRabbit comment 3179004190 on PR #2282.

The Array.isArray branch previously did `c.type === 'text'` directly,
which throws if `c` is null or a primitive — possible in malformed logs.
Tightened the filter with a type guard: requires c to be a non-null
object with type === 'text' and a string text field. Same defensive
class as the malformed-line and unknown-content-shape tolerances.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-03 22:27:07 -07:00
Alex Newman 9e2973059a UX redesign: installer + provider rename + /learn-codebase + welcome card + SessionStart hint (#2255)
* feat(ux): claude-mem UX improvements with installer enhancements

Squashed PR #2156 commits for clean rebase onto main:
- feat(installer): add provider selection, model prompt, worker auto-start
- refactor: rename *Agent provider classes to *Provider
- feat: add /learn-codebase skill and viewer welcome card
- feat(worker): inject welcome hint when project has zero observations
- fix(pr-2156): address greptile review comments
- fix(pr-2156): address coderabbit review comments
- fix(pr-2156): persist CLAUDE_MEM_PROVIDER for non-claude in non-TTY mode
- fix(pr-2156): file-backed settings reads in installer + env-first SKILL doc

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* build: rebuild plugin artifacts after rebase onto v12.4.7

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(skills): strip claude-mem internals from learn-codebase

The learn-codebase skill, install next-step copy, WelcomeCard, and
welcome-hint previously walked the primary agent through worker endpoints
and synthetic observation payloads. The PostToolUse hook already captures
every Read/Edit the agent makes — the agent should have no awareness that
the memory layer exists. Collapse the skill to one instruction ("read every
source file in full") and rephrase touchpoints to describe only what the
user observes (Claude reading files), not what happens behind the scenes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(sync): preflight version mismatch + settings-aware port resolution

Two related fixes for build-and-sync's worker restart step:

1. Read CLAUDE_MEM_WORKER_PORT from ~/.claude-mem/settings.json the same
   way the worker does, instead of computing the default port from the
   uid alone. Previously, users with a custom port saw a misleading
   "Worker not running" message because the restart POST hit the wrong
   port and got ECONNREFUSED.

2. Add a preflight check that aborts the sync when the running worker's
   reported version does not match the version we are about to build.
   Claude Code's plugin loader pins the worker to a specific cache
   version per session, so syncing into a newer cache directory has no
   effect until the user runs `claude plugin update thedotmack/claude-mem`
   to bump the pin. The preflight surfaces this explicitly with the exact
   command to run; --force bypasses it for intentional cases.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs(learn-codebase): note sed for partial reads of large files

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: strip comments codebase-wide

Removed prose comments from all tracked source. Preserved directives
(@ts-ignore, eslint-disable, biome-ignore, prettier-ignore, triple-slash
references, webpack magic, shebangs). Deleted two tests that asserted
on comment text rather than runtime behavior.

Net: 401 files, -14,587 / +389 lines, -10.4% bytes.

Verified: typecheck passes, build passes, test count unchanged from
baseline (22 pre-existing fails, all unrelated).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(installer): move runtime setup into npx, eliminate hook dead air

Smart-install ran 3 times during a fresh install — the worst run was silent,
fired by Claude Code's Setup hook after `claude plugin install`, producing
~30s of dead air that looked like the plugin was hung.

This change makes `npx claude-mem install` the single place heavy work
happens, with a visible spinner. Hooks become runtime-only.

- New `src/npx-cli/install/setup-runtime.ts` module: ensureBun, ensureUv,
  installPluginDependencies, read/writeInstallMarker, isInstallCurrent.
  Marker schema preserved exactly ({version, bun, uv, installedAt}) so
  ContextBuilder and BranchManager readers keep working.
- `npx claude-mem install`: ungated copy/register/enable for every IDE,
  inserts a "Setting up runtime" task with honest "first install can take
  ~30s" spinner. The claude-code shell-out to `claude plugin install` is
  removed — npx already populated everything Claude reads.
- New `npx claude-mem repair` command for post-`claude plugin update`
  recovery, force-reinstalls runtime.
- Setup hook now runs `plugin/scripts/version-check.js` (29ms wall) instead
  of smart-install. Mismatch prints "run: npx claude-mem repair" on stderr.
  Always exits 0 (non-blocking, per CLAUDE.md exit-code strategy).
- SessionStart loses the smart-install entry; 2 hooks remain (worker start,
  context fetch).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(installer): delete smart-install sources, retarget tests

- Delete scripts/smart-install.js + plugin/scripts/smart-install.js (both
  are source files kept in sync manually; both must go).
- Delete tests/smart-install.test.ts (covered surface is gone).
- tests/plugin-scripts-line-endings: drop smart-install.js entry.
- tests/infrastructure/plugin-distribution: retarget two assertions at
  version-check.js (the new Setup hook script).
- New tests/setup-runtime.test.ts: 9 tests covering marker read/write,
  isInstallCurrent semantics. Marker schema invariant verified.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs(installer): describe npx-driven setup + version-check Setup hook

Sweep public docs and architecture notes to reflect the new flow:
npx installer does Bun/uv setup with a visible spinner; Setup hook runs
sub-100ms version-check.js; users hit `npx claude-mem repair` after a
`claude plugin update`.

- docs/architecture-overview.md: hook lifecycle table + npx flow paragraph
- docs/public/configuration.mdx: tree + hook config example
- docs/public/development.mdx: build output line
- docs/public/hooks-architecture.mdx: full rewrite of pre-hook section,
  timing table, performance table
- docs/public/architecture/{overview,hooks,worker-service}.mdx: tree
  comments, JSON config example, Bun requirement section

docs/reports/* untouched (historical incident reports).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): mergeSettings writes via USER_SETTINGS_PATH

Greptile P1 (#2156): `settingsFilePath()` only resolved
`process.env.CLAUDE_MEM_DATA_DIR`, while `getSetting()` reads via
`USER_SETTINGS_PATH` which `resolveDataDir()` populates from BOTH the env
var AND a `CLAUDE_MEM_DATA_DIR` entry persisted in
`~/.claude-mem/settings.json`. Result: a user with the data dir saved in
settings.json but not exported in their shell would have provider/model
settings silently written to `~/.claude-mem/settings.json` while
`getSetting()` read from `/custom/path/settings.json` — read/write split.

Drop `settingsFilePath()` and the now-unused `homedir` import; reuse the
already-imported `USER_SETTINGS_PATH` constant.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(cli): parse --provider, --model, --no-auto-start install flags

Greptile P1 (#2156): InstallOptions has fields `provider`, `model`,
`noAutoStart`, but the install case in the npx-cli switch only parsed
`--ide`. The other three flags were silently dropped — `npx claude-mem
install --provider gemini` was a no-op.

Extract a `parseInstallOptions(argv)` helper, share it between the bare
`npx claude-mem` and `npx claude-mem install` paths, and validate
`--provider` against the allowed set. Update help text accordingly.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): pipe runtime-setup output, always show IDE multiselect

Two issues caught in a docker test of the installer:

1. The bun.sh installer, uv installer, and `bun install` were using
   stdio: 'inherit', dumping their stdout/stderr through clack's spinner
   region — visible as raw "downloading uv 0.11.8…" / "Checked 58
   installs across 38 packages…" text streaming under the spinner. Switch
   to stdio: 'pipe' and surface captured stderr only on failure (via a
   shared describeExecError() helper that includes stdout when stderr is
   empty). Spinner stays clean on the happy path.

2. promptForIDESelection() silently picked claude-code when no IDEs were
   detected, never showing the user the multiselect. On a fresh machine
   with no IDEs present yet (e.g. our docker test container), the user
   never got to choose. Now: always show the full IDE list when
   interactive; mark detected ones with [detected] hints and pre-select
   them; show a warn line if zero are detected explaining they should pick
   what they plan to use. Non-TTY callers still get the silent
   claude-code default at the call site (unchanged).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): skip marketplace work for claude-code-only, offer to install Claude Code

Two related UX fixes from a docker test:

**Delay between "Saved Claude model=…" and "Plugin files copied OK"**

After dropping the needsManualInstall gate, every install was unconditionally
running `copyPluginToMarketplace` (which copied the entire root node_modules
tree — thousands of files, dozens of seconds) and `runNpmInstallInMarketplace`
(npm install --production) even when only claude-code was selected. Neither
is needed for claude-code: that path uses the plugin cache dir + the
installed_plugins.json + enabledPlugins flag, all of which we already write.

- Drop `node_modules` from `copyPluginToMarketplace`'s allowed-entries list;
  the dependency-install task populates it on the destination side anyway.
- Re-introduce `needsMarketplace = selectedIDEs.some(id => id !== 'claude-code')`
  scoped *only* to `copyPluginToMarketplace`, `runNpmInstallInMarketplace`,
  and the pre-install `shutdownWorkerAndWait` (also pointless for claude-code-
  only flows since we're not overwriting the worker's running cache dir
  source). All other tasks (cache copy, register, enable, runtime setup) stay
  unconditional.

**Claude Code missing → silent install of an IDE that isn't there**

When the user picked claude-code on a machine without it (e.g. a fresh
container), the install completed but `claude` was unavailable and the only
hint was a generic warn line. Replace with an explicit pre-flight prompt:

  Claude Code is not installed. Claude-mem works best in Claude Code, but
  also works with the IDEs below.
  ? Install Claude Code now?
    ◆ Yes — install Claude Code (recommended)
    ◯ No — pick another IDE below
    ◯ Cancel installation

If the user picks "Yes", run `curl -fsSL https://claude.ai/install.sh | bash`
(or the PowerShell equivalent on Windows), then re-detect IDEs and proceed
with claude-code pre-selected. If the install fails or the user picks "No",
the multiselect still appears with claude-code visible (just unmarked
[detected]), so they can opt in or pick another IDE.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): detect Claude Code via `claude` CLI, not ~/.claude dir

The directory `~/.claude` can exist (e.g. mounted in Docker, or created
by tooling) without Claude Code actually being installed. Detect the
`claude` command in PATH instead so the installer correctly offers to
install Claude Code when missing.

* docs(learn-codebase): add reviewer note explaining the cost tradeoff

The skill intentionally reads every file in full to build a cognitive
cache that pays off across the rest of the project. Add a brief note
so reviewers (human or bot) understand the tradeoff before flagging
the unbounded read as a cost issue.

* fix: address Greptile P1 feedback on welcome hint and learn-codebase

- SearchRoutes: skip welcome hint when caller passes ?full=true so
  explicit full-context requests aren't intercepted by the hint.
- learn-codebase: replace `sed` instruction with the Read tool's
  offset/limit parameters, since Bash is gated in Claude Code by
  default.

* feat(install): ASCII-animated logo splash on interactive install

Plays a ~1s bloom animation of the claude-mem sunburst logomark when
the installer starts in an interactive terminal — geometrically rendered
via 12 ray curves around a center disc, in the brand orange. The
wordmark and tagline type on alongside the final frame.

Auto-skipped on non-TTY, in CI, when NO_COLOR or CLAUDE_MEM_NO_BANNER
is set, or when the terminal is too narrow.

Inspired by ghostty +boo.

* feat(banner): replace rotation frames with angular-sector bloom generator

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(banner): replace rotation frames with angular-sector bloom generator

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(banner): three-act choreography renderer with radial gradient and diff redraw

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(banner): update preview script to support small/medium/hero tier selection

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(docker): add COLORTERM=truecolor to test-installer sandbox

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(install): auto-apply PATH for Claude Code with spinner UX

The Claude Code install.sh prints a Setup notes block telling users to
manually edit "your shell config file" to add ~/.local/bin to PATH —
which left fresh installs unable to launch claude from the command line.

After a successful install, detect ~/.local/bin/claude on disk and, if
the dir is missing from PATH, append the right export line to .zshrc /
.bash_profile / .bashrc / fish config (idempotent, marked with a
comment). Also updates process.env.PATH for the current install run.

Wraps the curl|bash install in a clack spinner (interactive only) so the
~4 minute native-build download doesn't look frozen — output is captured
silently and dumped on failure for debuggability. Non-interactive mode
keeps inherited stdio for CI logs.

Verified end-to-end in the test-installer docker sandbox: spinner
animates, .bashrc gets the export, fresh login shell resolves claude.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(banner): video-frame ASCII renderer with three-act choreography

Generator switched from a single Jimp-rendered logo to pre-extracted
video frames concatenated with \x01 separators and gzip-deflated, ported
from ghostty's boo wire format. Renderer rewritten around three acts
(ignite → stagger bloom → text reveal + breathe) with adaptive sizing,
radial gradient, and diff-based redraw.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(onboarding): unify install / SessionStart / viewer around one first-success moment

Three surfaces now point at the same north-star moment — open the viewer, do
anything in Claude Code, watch an observation appear within seconds — with the
same verbatim timing and privacy lines, and a single canonical "how it works"
explainer instead of three diverging copies.

- Canonical explainer at src/services/worker/onboarding-explainer.md served via
  GET /api/onboarding/explainer; mirrored into plugin/skills/how-it-works/SKILL.md
- SessionStart welcome hint rewritten as third-person status (no imperatives
  Claude tries to execute), pinned with a default-value regression test
- Post-install Next Steps reframed as "two paths": passive default + optional
  /learn-codebase front-load; drops /mem-search and /knowledge-agent from this
  surface; adds verbatim timing + privacy lines and /how-it-works link
- /api/stats response gains firstObservationAt for the viewer stat row
- Viewer WelcomeCard branches on observationCount === 0: empty state shows live
  worker-connection dot + "waiting for activity"; has-data state shows
  observations · projects · since [date] and two example prompts. v2 dismiss key
- jimp added to package.json to fix pre-existing banner-frame build break

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(banner): play unconditionally; only honor CLAUDE_MEM_NO_BANNER

The 128-col / TTY / CI / NO_COLOR gates silently swallowed the banner in
narrower terminals, CI logs, and any non-TTY pipe — including Docker runs
where -it should preserve the experience but column width was the wrong
gate. Remove the implicit gates; keep the explicit opt-out only.

If a frame wraps in a narrow terminal, that's better than the banner
not playing at all.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* revert(banner): restore 15:33 gating logic per user request

Reverts eb6fc157. Restores isBannerEnabled to the state at commit
8e448015 (2026-04-30 15:33): TTY check, !CI, !NO_COLOR, !CLAUDE_MEM_NO_BANNER,
and cols >= BANNER.width.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(install): wrap remaining slow steps with spinners

Each IDE installer (Cursor, Gemini CLI, OpenCode, Windsurf, OpenClaw,
Codex CLI, MCP integrations) now runs inside a clack task spinner with
per-step progress messages instead of silent dynamic-import + cpSync.
Pre-overwrite worker shutdown (up to 10s) and the post-install health
probe (up to 3s) also get spinners.

Internal console.log/error/warn from each IDE installer is buffered
during the spinner; if the install fails, captured output is replayed
afterward via log.warn so users can see what broke.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(review): observation count + IDE pre-selection regressions

WelcomeCard's "no observations yet" empty state was triggered when a
project filter narrowed the feed to zero rows, even with thousands of
observations elsewhere. Source the count from global stats.database
to match firstObservationAt's scope.

Restore initialValues: [] in the IDE multiselect — pre-selecting every
detected IDE was the exact regression #2106 was filed for.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): trichotomy worker state + cache fallback for script path

ensureWorkerStarted now returns 'ready' | 'warming' | 'dead' instead of
boolean. The spawned-but-still-warming case (common in Docker cold
starts and slow first-time inits) was being misreported as 'did not
start', which contradicted the next-steps panel saying 'still starting
up'. Install task message and Next Steps headline now agree on the
actual state.

Also fixes the actual root cause of 'Worker did not start' on
claude-code-only installs: the worker script path was hardcoded to the
marketplace dir, which is left empty when no non-claude-code IDE is
selected. Now falls back to pluginCacheDirectory(version) when the
marketplace copy isn't present.

Verified end-to-end in docker/claude-mem with --ide claude-code,
--ide cursor, and a fresh container — install task and headline
agree on 'Worker ready at http://localhost:<port>' in all cases.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs: align CLAUDE.md and public docs with current code

Sweep across CLAUDE.md and 10 high-traffic docs/public/ MDX files to
remove point-in-time references and align with the actual current
shape of the codebase. Highlights:

- Hardcoded port 37777 → per-user formula (37700 + uid % 100) on the
  front-door pages (introduction, installation, configuration,
  architecture/overview, architecture/worker-service, troubleshooting,
  hooks-architecture, platform-integration).
- Default model 'sonnet' → 'claude-haiku-4-5-20251001' (matches
  SettingsDefaultsManager).
- Node 18 → 20 (matches package.json engines).
- Lifecycle hook count corrected (5 events).
- Removed the nonexistent 'Smart Install' component and pre-built
  directory tree referencing files that no longer exist
  (context-hook.ts, save-hook.ts, cleanup-hook.ts, etc.); replaced
  with the real worker dispatcher shape.
- Removed CLAUDE.md '#2101' issue tag (kept the design rationale).
- Replaced obsolete hooks.json example with a description of the real
  bun-runner.js / worker-service.cjs hook event shape.

Lower-traffic doc pages still hardcode 37777 — left for a separate
global pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(scripts): land strip-comments around real parsers (postcss, remark, parse5)

Each language gets a real parser to locate comments, then we splice ranges
out of the original source. The library never serializes — that's how
remark-stringify produced 243 reformat-noise diffs in the first attempt
versus the 21 real strip targets here.

  JS/TS/JSX  -> ts.createSourceFile + getLeadingCommentRanges
  CSS/SCSS   -> postcss.parse + walkComments + node.source offsets
  MD/MDX     -> remark-parse (+ remark-mdx) + AST html / mdx-expression nodes
  HTML       -> parse5 with sourceCodeLocationInfo
  shell/py   -> kept hand-rolled hash stripper (no library worth the dep)

Preserves: shebangs, @ts-* directives, eslint-disable, biome-ignore,
prettier-ignore, triple-slash refs, webpack magic, /*! license keep,
@strip-comments-keep file marker. JS/TS handler runs a parse-roundtrip
check and refuses to write if syntax errors increased (catches the
worker-utils.ts breakage class from the 2026-04-29 attempt).

npm scripts:
  strip-comments         (apply)
  strip-comments:check   (CI-style, exits non-zero if changes needed)
  strip-comments:dry-run (list, no writes)

Verified --check on this repo: 21 changes, -4.0% bytes, no parse-error
regressions, no reformat-suspect false positives.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: strip comments codebase-wide via parser-backed tool

21 files changed, -17,550 bytes (-4.0%) of narrative comments removed
across .ts / .tsx / .js / .mjs and the .gitignore. JS/TS comments stripped
via ts.createSourceFile + getLeadingCommentRanges — same canonical lexer,
same behavior as the 2026-04-29 strip, no reformat noise.

Preexisting baseline (unchanged):
  typecheck: 16 errors at HEAD, 16 errors after strip (line numbers shift,
             no new error classes — verified via diff of sorted error lists)
  build:     fails at HEAD with CrushHooksInstaller.js unresolved import
             (preexisting, unrelated to this strip)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(install): drop Crush integration references after extract

The Crush integration was extracted to its own branch on May 1, but the
import at install.ts:280 (and the case block + ide-detection entry +
McpIntegrations config + npx-cli help text) still referenced the now-
removed CrushHooksInstaller.js, breaking the build.

Removes:
- case 'crush' block in install.ts
- crush entry in ide-detection.ts
- CRUSH_CONFIG and registration in McpIntegrations.ts
- 'crush' from the IDE Identifiers help line in index.ts

Rebuilds worker-service.cjs to match.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(banner): mark generated banner-frames.ts with @strip-comments-keep

Without this, every build/strip cycle ping-pongs five lines of doc
comments in and out of the auto-generated output. The keep-marker tells
strip-comments.ts to skip the file entirely.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(build): drop banner-frame regen from build script

generate-banner-frames.mjs requires PNG frames in /tmp/cmem-banner-frames
that only exist after the maintainer runs ffmpeg locally on the source
video. CI has neither the video nor the frames, so the build broke on
Windows. The output (src/npx-cli/banner-frames.ts) is committed, so the
regen is a one-shot dev step — not a build step. Run the script directly
when the video changes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(worker): unstick the spinner — kill claim-self-lock, wake on fail, auto-broadcast

Three surgical changes that cure the stuck-spinner bug at the source.

Phase 1.1 (L9): claimNextMessage no longer self-excludes its own worker_pid.
A single UPDATE-RETURNING grabs the oldest pending row by id. Removes the
LiveWorkerPidsProvider plumbing that was never injected — Supervisor enforces
single-worker via PID file, so the multi-worker SQL was defending against a
configuration the project does not support.

Phase 1.2 (L19): SessionManager.markMessageFailed wraps PendingMessageStore.markFailed
and emits 'message' on the per-session EventEmitter. The iterator's waitForMessage
now wakes immediately on re-pend instead of parking for 3 minutes. ResponseProcessor
and SessionRoutes routed through the new wrapper.

Phase 1.3 (L24): PendingMessageStore takes an optional onMutate callback fired
from every mutator (enqueue, claimNextMessage, confirmProcessed, markFailed,
transitionMessagesTo, clearFailedOlderThan). SessionManager wires it; WorkerService
passes broadcastProcessingStatus. Ten manual broadcast calls deleted across
SessionCleanupHelper, SessionEventBroadcaster, SessionRoutes, DataRoutes, and
worker-service. Caller discipline becomes structurally impossible to forget.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): delete dead code — legacy routes, processPendingQueues, decorative guards

Pure deletions. Phase 2 of kill-the-asshole-gates.

- Legacy /sessions/:sessionDbId/* routes (handleSessionInit, handleObservations,
  handleSummarize, handleSessionStatus, handleSessionDelete, handleSessionComplete)
  bypassed all five ingest gates and were a parallel write path. Folded the
  initializeSession + broadcastNewPrompt + syncUserPrompt + ensureGeneratorRunning
  + broadcastSessionStarted work into the canonical /api/sessions/init handler so
  the hook makes one round trip instead of two.
- processPendingQueues (~104 lines, zero callers) — replaced in Phase 6 by a
  one-statement startup sweep.
- spawnInProgress Map and crashRecoveryScheduled Set — decorative dedupe over
  generatorPromise and stillExists checks that already provide the real safety.
- STALE_GENERATOR_THRESHOLD_MS — pre-empted live generators and raced with the
  finally block; the 3min idle timeout already kills zombies.
- MAX_SESSION_WALL_CLOCK_MS — ran a SELECT on every observation to enforce 24h.
  Runaway-spend protection lives in the API key, not in claude-mem.
- Missing-id 400 in shared.ts ingestObservation — Zod already enforces min(1)
  on contentSessionId and toolName at the route schema.
- SessionCompletionHandler import + completionHandler field on SessionRoutes
  (orphaned after handler deletions).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): SQL-backed getTotalQueueDepth — single source of truth

Was: iterate this.sessions.values() and sum getPendingCount per session.
Now: SELECT COUNT(*) FROM pending_messages WHERE status IN ('pending','processing').

The in-memory sessions Map drifted from the DB rows whenever a generator exited
without confirm/fail, leading to false-positive isProcessing in the UI. Phase 1.3's
auto-broadcast fires on every mutation, but it broadcast a stale Map count.
Reading from the DB makes the UI's spinner state match what the queue actually holds.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): typed abortReason replaces wasAborted boolean

Was: a boolean wasAborted that lumped every abort together. The finally block
branched on !wasAborted, so any abort skipped restart — including idle aborts
with pending work, which is exactly the case where we DO want to restart.

Now: ActiveSession.abortReason is a typed enum 'idle' | 'shutdown' | 'overflow'
| 'restart-guard'. The finally block consumes the reason and only skips restart
for 'shutdown' and 'restart-guard'. Idle and overflow aborts fall through, so
if pending work exists they trigger restart correctly.

Dropped 'stale' and 'wall-clock' from the union — Phase 2 deleted those paths.
Natural-completion abort (post-success) intentionally has no reason; it's not
gating restart logic.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): unify the two generator-exit finally blocks

Was: worker-service.ts:startSessionProcessor and SessionRoutes:ensureGeneratorRunning
each had their own ~70-line finally block with divergent restart-guard handling.
The worker-service path called terminateSession on RestartGuard trip and orphaned
pending rows (the L16 bug); the SessionRoutes path drained them. Two places to
update when rules changed.

Now: handleGeneratorExit in src/services/worker/session/GeneratorExitHandler.ts
owns the contract:
  1. Always kill the SDK subprocess if alive.
  2. Always drain processingMessageIds via sessionManager.markMessageFailed
     (which wakes the iterator — Phase 1.2).
  3. shutdown / restart-guard reasons: drain pending rows via
     transitionMessagesTo('failed'), finalize, remove from Map. Fixes L16.
  4. pendingCount=0: finalize normally and remove from Map.
  5. pendingCount>0: backoff respawn via per-session respawnTimer (no global Set;
     Phase 2.4 deleted that). RestartGuard trip drains to 'abandoned'.

Both finally blocks are now ~10-line wrappers that translate local state into the
canonical abortReason and delegate. Restored completionHandler injection into
SessionRoutes (was dropped in Phase 2 cleanup; needed by the unified helper for
finalizeSession).

Behavior change: SessionRoutes' previous "keep idle session in memory" was
deliberately replaced by the plan's "remove from Map on natural completion" —
next observation reinitializes via getMessageIterator → initializeSession.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(worker): startup orphan sweep — reset 'processing' rows at boot

When the worker dies (crash, kill, restart), any pending_messages rows it left
in 'processing' state are by definition orphans (the only worker is dead).
Single SQL UPDATE at boot resets them to 'pending' so the iterator can claim
them again. Replaces the deleted processPendingQueues function (Phase 2.2).

Runs in initializeBackground after dbManager.initialize() and before the
initializationComplete middleware releases blocked HTTP requests, so no
in-flight request can race the sweep. NOT on a periodic timer — after boot,
every 'processing' row has a live consumer and a periodic sweep would race.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): simplify enqueue catch, replace memorySessionId throw with re-pend

7.1: queueObservation's catch was logging two ERROR-level messages and rethrowing.
The rethrow is correct (FK violations / disk full / schema drift should crash
loudly), but the verbose ERROR logging pretended the error was recoverable.
Reduced to one INFO line + rethrow.

7.2: ResponseProcessor's memorySessionId guard was throwing if the SDK hadn't
included session_id on the first user-yield, terminal-failing the entire batch.
Now warns and re-pends in-flight messages via sessionManager.markMessageFailed
(which wakes the iterator — Phase 1.2). The next iteration tries again with
memorySessionId hopefully captured.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(sync): mirror builds to installed-version cache for hot reload

When package.json bumps past Claude Code's installed pin, sync-marketplace
wrote new code to cache/<buildVersion>/ but the worker loaded from
cache/<installedVersion>/, so worker:restart reloaded the same old code.

Replace the exit-on-mismatch preflight with a mirror step: when versions
differ, also rsync plugin/ into cache/<installedVersion>/ so worker:restart
hot-reloads new code without a Claude Code session restart. The
build-version cache still gets written for the eventual
`claude plugin update`.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: delete dead barrel files and orphan utilities

- src/sdk/index.ts (re-exports parser+prompts; nothing imported the barrel)
- src/services/Context.ts (re-exports ./context/index.js; no importers)
- src/services/integrations/index.ts (no importers)
- src/services/worker/Search.ts (3-line barrel of ./search/index.js)
- src/services/infrastructure/index.ts: drop CleanupV12_4_3 re-export
- src/utils/error-messages.ts (getWorkerRestartInstructions never imported)
- src/types/transcript.ts (170 LoC of types, zero importers)
- src/npx-cli/_preview.ts (banner dev preview, no script wires it)

Build + tests still pass; observations still flowing.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(parser): drop unused detectLanguage

Only the user-grammar-aware variant detectLanguageWithUserGrammars()
is actually called.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(types): drop unused SdkSessionRecord + ObservationWithContext

Both interfaces in src/types/database.ts had zero importers anywhere
in src or tests.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(npx-cli): drop unused getDetectedIDEs + claudeMemDataDirectory

getDetectedIDEs has no callers — install.ts uses detectInstalledIDEs
directly. claudeMemDataDirectory has no callers either.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(ProcessManager): drop dead orphan-reaper + signal-handler helpers

Each had zero callers in src/ or tests/:
  - cleanupOrphanedProcesses + enumerateOrphanedProcesses
  - ORPHAN_PROCESS_PATTERNS + ORPHAN_MAX_AGE_MINUTES
  - forceKillProcess
  - waitForProcessesExit
  - createSignalHandler
  - resetWorkerRuntimePathCache

The orphan reaper was retired in PATHFINDER Plan 02 ("OS process groups
replace hand-rolled reapers", commit 94d592f2) — these were the leftover
pieces. shutdown.ts uses the supervisor's own kill-pgid path instead.

parseElapsedTime kept (covered by tests/infrastructure/process-manager.test.ts).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(scripts): delete 11 unreferenced DX/forensic scripts

None of these are referenced by package.json npm scripts or docs/.
All last touched on Apr 29 only as part of the comment-stripping
pass — the feature code itself is older and orphaned:

  analyze-transformations-smart.js
  debug-transcript-structure.ts
  dump-transcript-readable.ts
  endless-mode-token-calculator.js
  extract-prompts-to-yaml.cjs
  extract-rich-context-examples.ts
  find-silent-failures.sh
  fix-all-timestamps.ts
  format-transcript-context.ts
  test-transcript-parser.ts
  transcript-to-markdown.ts

These are standalone tools — runtime behavior unchanged.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(scripts): delete unused extraction/ and types/ subdirs

- scripts/extraction/{extract-all-xml.py, filter-actual-xml.py, README.md}
  point at ~/Scripts/claude-mem/ — the user's pre-relocation path that no
  longer exists. Zero references in package.json, src/, or tests/.
- scripts/types/export.ts duplicates ObservationRecord etc. and has no
  importers (CodexCliInstaller imports transcripts/types, not this).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(BranchManager): drop dead getInstalledPluginPath

OpenCodeInstaller has its own (used) getInstalledPluginPath; the
BranchManager copy never had any external callers.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(ChromaSyncState): unexport DocKind (used internally only)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(gemini): drop stale earliestPendingTimestamp / processingMessageIds

Both fields were removed from ActiveSession in earlier queue-engine
cleanup. Tests had been silently keeping them because the mock sessions
use 'as any' to bypass strict typing, so the dead fields rode along
without complaint.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: drop 3 unused module-level constants

- src/npx-cli/banner.ts: CURSOR_HOME, CLEAR_DOWN (banner uses
  CLEAR_SCREEN which combines clear-down + cursor-home into a single
  CSI sequence; the standalone constants were leftovers).
- src/services/worker/BranchManager.ts: DEFAULT_SHELL_TIMEOUT_MS
  (BranchManager only uses GIT_COMMAND_TIMEOUT_MS / NPM_INSTALL_TIMEOUT_MS).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(opencode-plugin): drop dead workerPost helper

Only the fire-and-forget variant (workerPostFireAndForget) is actually
called. workerPost was the await-result version with no remaining caller.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: drop 8 truly-unused interface fields

Verified each by grepping for `.field`, `"field"`, `'field'`, and
`field:` patterns across src/ + tests/ + plugin/scripts. Where the
only remaining usage was the assignment site, removed the assignments too.

- GitHubStarsData: watchers_count, forks_count (only stargazers_count read)
- TableColumnInfo: dflt_value (PRAGMA returns it but no caller reads it)
- IndexInfo: seq (PRAGMA returns it but no caller reads it)
- ObservationRecord: source_files (legacy field, no readers)
- HookResult.hookSpecificOutput: permissionDecisionReason
- WatchTarget: rescanIntervalMs (set in config, never read)
- ShutdownResult: confirmedStopped (write-only — assigned but no
  reader; updated all 3 return sites to drop it)
- ModePrompts: language_instruction (multilingual support never wired)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(npx-cli): reuse InstallOptions type instead of inline duplicate

parseInstallOptions had its return type written out inline as an
anonymous duplicate of InstallOptions. Use the canonical type
(import type — zero bundle cost).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(integrations): drop unused Platform type alias

The detectPlatform() function that returned this type was deleted earlier
in the branch (along with getScriptExtension that consumed it). The type
itself outlived its consumer; only string literals "Platform:" survive in
console.log diagnostics, which don't reference the alias.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(worker): broadcast processing_status when summarize is queued

broadcastSummarizeQueued was an empty no-op even though
handleSummarizeByClaudeId calls it after enqueueing. The PendingMessageStore
onMutate callback already fires broadcastProcessingStatus on enqueue, but
calling it explicitly from broadcastSummarizeQueued ensures the spinner
ticks on the moment a summary is requested even if the onMutate chain has
any timing race.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(worker): keep spinner on while summary generates

ClaudeProvider's SDK can pull multiple synthetic prompts (e.g.
observation + summarize) before producing responses. Each pull pushed
an ID to session.processingMessageIds. When the SDK's first
observation response came back, ResponseProcessor.confirmProcessed
deleted ALL pending message rows — including the still-in-flight
summary — so getTotalQueueDepth dropped to 0 and the spinner turned
off, even though the summary took another ~22s to actually generate.

Tag each in-flight message with its type ({id, type}) so the response
processor can pop only the FIFO message of the matching type
(observation vs summarize). The summary row stays in 'processing'
until its own response arrives, keeping the spinner lit through the
entire summary window.

Also updates Gemini/OpenRouter providers and GeneratorExitHandler for
the new shape.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(worker): clear summary from queue on any SDK response

Switch ResponseProcessor from type-aware FIFO matching to strict FIFO
popping (each SDK response → 1 in-flight message consumed). This way
the summary always clears when the SDK responds, even when the
response is unparseable or the summary doesn't actually generate
content — preventing stuck spinner / queue-depth-stuck-at-1.

Spinner behavior is preserved: messages enqueued after the summary
keep the queue depth elevated, and only when the SDK has responded
to every prompt does the queue drain to zero.

Also: when the consumed message is a 'summarize' and parsing fails,
treat it as best-effort and confirmProcessed (no retry) — summaries
that can't be parsed shouldn't keep retrying.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(viewer): redesign welcome card and remove source filters

The first-start welcome card now explains the three feed card types
(observation/summary/prompt) with color-coded badges, points users at
the gear icon for settings and the project dropdown for filtering, and
plugs /mem-search for recall — replacing the old two-line "ask:" prompts.

Source filter tabs (Claude/Codex/etc.) are removed from the header.
Filtering by AI provider was nonsense from a user POV; the project
dropdown is the only header filter now. Source tracking is also
stripped from useSSE, usePagination, App state, and CSS.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(viewer): keep welcome card in feed column, swap rows for 3 squares

Two visible problems in the previous design: the card stretched
edge-to-edge while feed cards sit in a centered 650px column, and
the body was a stack of long horizontal rows that scanned line-by-line.

Both fixed: Feed now accepts a pinnedTop slot so the welcome card
renders inside the same .feed-content column as observation cards.
Body is now a 3-column grid of square feature blocks — Live feed,
Tune it, Recall it — each with a custom inline SVG illustration
(stacked cards with color-coded stripes, gear+sliders, magnifier
over cards). Old text-row sections (welcome-card-types,
welcome-card-tips, welcome-card-section, welcome-card-tip-icon)
are removed. Squares stack to one column under 600px.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(viewer): convert welcome card to glassy modal with stylized logo

Card now opens as a centered modal with a frosted/glass backdrop
(blur + saturate) so it doubles as a proper help dialog when reopened
from the header's question-mark button. Removed the observation count,
project count, and "since" date — those don't make sense for a
first-launch surface and felt out of place in a help context.

Header art swapped from the small webp logomark to the new
high-resolution sun/sunburst PNG (claude-mem-logo-stylized.png),
shipped as a checked-in asset in src/ui and plugin/ui.

Bigger throughout: 28px h2, 16px tagline, 88px illustrations,
26px feature padding, 1:1 aspect-ratio squares. Backdrop click and
Esc both close. Mobile collapses the grid to one column and drops
the aspect-ratio constraint.

Reverted the unused pinnedTop slot on Feed.tsx since the welcome
card is now a true overlay rather than an in-feed pinned card.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(viewer): make welcome modal actually glassy

Previous version had a 55%-opacity black backdrop that almost fully
blocked the underlying UI — the "glass" was just a dark plate.

Now the backdrop is fully transparent (no darkening at all), the
panel itself drops to 55% bg-card opacity with its existing
backdrop-filter blur(28px) saturate(170%), and the feature squares
drop to 35% bg-tertiary so they layer as glass-on-glass over the
already-blurred panel. The header and feed below now read clearly
through the modal's frosted blur.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(viewer): bulletproof square features via padding-bottom + clamp() fluid type

Squares were rendering taller than wide because aspect-ratio is treated
as a minimum — content can push the box past 1:1. Switched to the
classic padding-bottom: 100% trick: percentage padding resolves against
the parent's width, so the box is ALWAYS W × W regardless of content.
Inner content sits in an absolutely-positioned flex column that can't
push the shell taller.

Whole modal is now desktop-first and fluid via clamp() — no media-query
stair-steps for type, padding, gaps, border-radius, illustration size,
or modal width. Single mobile breakpoint at <600px collapses the grid
to one column and reverts the padding-bottom trick so each feature can
grow to natural content height.

Tightened the three feature descriptions so they fit comfortably inside
the square at the desktop size.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* style(viewer): 15% black overlay + heavier modal shadow for elevation

Backdrop goes from transparent to rgba(0,0,0,0.15) — just enough
darkening to push the modal visually forward without burying the
underlying UI. Modal shadow stacked: 40px/120px ambient + 16px/48px
contact, both deeper, plus the existing inset 1px highlight.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(build): clear pending_messages queue on build-and-sync

Rewrites scripts/clear-failed-queue.ts to talk directly to SQLite via
bun:sqlite — the previous HTTP endpoints (/api/pending-queue/*) were
removed during the queue engine rewrite, so the script was orphaned.
Wires `npm run queue:clear` into `build-and-sync` so each rebuild
starts with a clean queue.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(worker): collapse parser to binary valid/invalid + clearPendingForSession model

- Parser: { valid: true, observations, summary } | { valid: false } — drops kind/skipped enum dispatch
- ResponseProcessor: two branches only (parseable → store + clearPendingForSession; else → no-op)
- Drop processingMessageIds + per-message claim/confirm/markFailed lifecycle across 3 providers
- PendingMessageStore: 226 → 140 lines; remove markFailed/transitionMessagesTo/confirmProcessed/clearFailedOlderThan/getAllPending/peekPendingTypes... wait keep peekPendingTypes
- Schema migration v31+v32: drop retry_count, failed_at_epoch, completed_at_epoch, worker_pid columns
- SessionQueueProcessor: delete two 1s recovery sleeps (let iterator end on error)
- Server.ts/SettingsRoutes.ts: replace four magic-number setTimeout exit-flush patterns with flushResponseThen helper
- GeneratorExitHandler: 183 → 117 lines (drain in-flight loop gone)

Net: -181 lines. No more silent data loss via maxRetries=3.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(pr-2255): address review comments batch 1

- install.ts: needsMarketplace true when claude-code selected (P1, was no-op)
- install.ts: throw on invalid --model so CLI exits non-zero
- install.ts: skip worker health checks + adapt next-step copy when --no-auto-start
- install.ts: repair regenerates plugin cache when missing
- index.ts: readFlag rejects missing/flag-shaped values
- index.ts: route flag-first invocations (e.g. `--provider claude`) to install
- banner.ts: fail-open if frame payload decode throws
- SearchRoutes.ts: 5s TTL cache for settings reads on hot hook path (P2)
- detect-error-handling-antipatterns.ts: trailing-brace strip whitespace-tolerant
- investigate-timestamps.ts: compute Dec 2025 epochs at runtime (was Dec 2024)
- regenerate-claude-md.ts: include workingDir in fallback walker so root is covered
- sync-marketplace.cjs: parseWorkerPort validates 1..65535 before http.request
- sync-to-marketplace.sh: resolve SOURCE_DIR from script location, not cwd
- Dockerfile.test-installer: bash --login sources .bashrc via .bash_profile
- docs/configuration.mdx: drop nonexistent .worker.port file refs, use settings.json
- docs/architecture-overview.md: dynamic port + queue model after parser collapse
- docs/architecture/worker-service.mdx: dynamic port example + drop port-file claim
- docs/platform-integration.mdx: WORKER_BASE_URL pattern, drop hardcoded 37777
- install/public/install.sh: Node 20 floor (was 18) to match docs

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(pr-2255): reset claimed messages to pending on early-return paths

ResponseProcessor returns early in two cases:
- parser invalid (unparseable response)
- memorySessionId not yet captured

Both paths previously left the just-claimed message in `status='processing'`,
which counts toward `getPendingCount`. The generator-exit handler then sees
`pendingCount > 0` and respawns the generator, looping until the restart
guard trips and `clearPendingForSession` deletes the message — silent data
loss.

Calling `resetProcessingToPending` on these paths lets the next generator
pass re-claim the message and try again, instead of burning the restart
budget on no-op respawns.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(pr-2255): swebench fallback row + troubleshooting port path

- evals/swebench/run-batch.py: append fallback prediction row when
  orchestrator future raises, preserving "never drop an instance" guarantee
- docs/troubleshooting.mdx: drop nonexistent .worker.port / worker.port file
  references; use settings.json + /api/health for port discovery

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(pr-2255): memoize per-project observation count for welcome-hint hot path

handleContextInject runs on every PostToolUse hook (after every Read/Edit).
The welcome-hint block ran a COUNT(*) on observations for every call once
CLAUDE_MEM_WELCOME_HINT_ENABLED was true. Observation counts are
monotonically increasing — once a project has any observations it always
will — so cache the positive result in a Set and skip the COUNT(*) on
subsequent requests.

Combined with the 5s settings TTL added earlier, the steady-state cost on
the hook hot path drops to a Set lookup.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(pr-2255): use clearProcessingForSession on AI-success path

clearPendingForSession deletes ALL rows for the session. On the success
path of processAgentResponse, that's wrong: messages that arrived as
'pending' during the (1-5s) AI response latency get deleted along with
the 'processing' row we just consumed. In a hook burst (three quick
PostToolUse hooks), B and C land while A is in flight; A's success then
nukes B and C — silent data loss.

Add a status-scoped clearProcessingForSession to PendingMessageStore +
SessionManager, and use it in ResponseProcessor's success path. The
unconditional clearPendingForSession remains correct in
GeneratorExitHandler for hard-stop / restart-guard-trip paths.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* Revert "fix(pr-2255): use clearProcessingForSession on AI-success path"

This reverts commit a08995299c30cbad36bddc3e5bddda7af8604b35.

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-05-02 16:05:56 -07:00
Alex Newman d13662d5d8 Cynical deletion: close 27 issues by removing defenders + tolerators (#2141)
* fix: mirror migration 28 in SessionStore so pending_messages.tool_use_id and worker_pid columns are created (#2139)

SessionStore's inline migration list jumped from v27 to v29, skipping
rebuildPendingMessagesForSelfHealingClaim. The worker uses SessionStore
directly via worker/DatabaseManager.ts and bypasses the canonical
MigrationRunner, so fresh installs ended up at "max v29" with neither
column present — every queue claim and observation insert failed.

Adds addPendingMessagesToolUseIdAndWorkerPidColumns following the existing
mirror precedent (addObservationSubagentColumns / addObservationsUniqueContentHashIndex).
Uses ALTER TABLE + column-existence guards so already-broken DBs at v29
self-heal on next worker boot.

Verified on fresh DB and on a synthetic v29-without-v28 broken DB:
both columns and indexes (idx_pending_messages_worker_pid,
ux_pending_session_tool) appear after one boot.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: wrap v28 mirror dedup+index creation in transaction

Addresses Greptile P2 review on PR #2140: matches the existing pattern in
addObservationsUniqueContentHashIndex (v29 mirror at SessionStore.ts:1127)
and runner.ts rebuildPendingMessagesForSelfHealingClaim. A crash between
the dedup DELETE and the schema_versions INSERT no longer leaves the DB
in a half-applied state.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs(plan): cynical-deletion plan for 29 open issues

9-phase plan applying delete-first lens to triaged issue corpus.
Headlines: kill defenders (orphan cleanup, EncodedCommand spawn,
restart-port-steal) and tolerators (silent JSON drops, drifted SSE
filters). Each phase closes a named subset of issues.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: delete process-management theater (Phase 1: DEL-1 + DEL-2)

Delete aggressiveStartupCleanup, the PowerShell -EncodedCommand
spawn branch, and the restart-with-port-steal sequence. Replace
daemon spawning with a single uniform child_process.spawn path
using arg-array form, keeping setsid on Unix when available.

The defenders (orphan cleanup, duplicate-worker probes, port
stealing) bred more bugs than they fixed. PID file with start-time
token already provides correct OS-trust ownership; restart now
requests httpShutdown, waits 5s for the port to free, then exits 1
if it didn't (user resolves). Net -247 lines.

Closes #2090, #2095 (already fixed at session-init.ts:78), #2107,
#2111, #2114, #2117, #2123, #2097, #2135.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: observer-sessions trust boundary via CLAUDE_MEM_INTERNAL env (Phase 2: DEL-9)

Replace the cwd === OBSERVER_SESSIONS_DIR discriminator (which every
consumer must repeat and inevitably drifts) with a single env-var
trust boundary set once at spawn time in buildIsolatedEnv.

- buildIsolatedEnv now sets CLAUDE_MEM_INTERNAL=1, covering all three
  spawn sites (SDKAgent, KnowledgeAgent.prime, KnowledgeAgent.executeQuery)
- shouldTrackProject checks the env var first (cwd check stays as
  belt-and-braces fallback)
- New shared shouldEmitProjectRow predicate — SSE broadcaster and
  pagination filter share the same predicate so they can never drift
  apart (#2118)
- ObservationBroadcaster filters observer rows from SSE stream
- PaginationHelper hardcoded 'observer-sessions' replaced with
  OBSERVER_SESSIONS_PROJECT const
- project-filter basename match pass — *observer-sessions* now matches
  basename, not just full path (globToRegex's [^/]* can't cross /)
  (#2126 item 1)
- New `claude-mem cleanup [--dry-run]` subcommand wires CleanupV12_4_3
  through to the worker for #2126 item 5

Closes #2118, #2126.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: strip proxy env vars before spawning worker (Phase 4: CON-1)

User's HTTP_PROXY/HTTPS_PROXY config was bleeding into internal AI
calls when claude-mem spawns the claude subprocess, causing
connection failures. Strip unconditionally — no passthrough knob,
which rejects #2099's whitelist proposal.

Closes #2115, #2099.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: fail-fast on silent drops in stdin/file-context/memory-save (Phase 5: FF-1)

Three independent fail-fast fixes:

#2089 — stdin-reader silent drop. Non-empty stdin that fails JSON.parse
now rejects with a clear error instead of resolving undefined. Empty
stdin still resolves undefined.

#2094 — PreToolUse:Read truncation Edit deadlock. file-context handler
no longer returns a fake truncated Read result via updatedInput.
Removes userOffset/userLimit/truncated machinery; injects the timeline
via additionalContext only and lets the real Read pass through. Read
state and Claude's expectation now stay consistent, eliminating the
infinite Edit retry loop.

#2116 — /api/memory/save metadata drop + project bug. Schema accepts
metadata as a documented JSON column (migration 30 adds observations.
metadata TEXT, mirrored in SessionStore). Schema also tightened to
.strict() so unknown top-level fields fail fast instead of being
silently dropped. Project resolution now consults metadata.project as
a fallback before defaultProject.

Closes #2089, #2094, #2116.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: small deletions — Zod externalize / Gemini fallback / session timeout / installCLI alias (Phase 6)

DEL-4 (#2113): Externalize zod from mcp-server.cjs and context-generator.cjs
hook bundles so OpenCode's runtime resolves a single Zod copy. Worker
keeps Zod bundled (it's a daemon subprocess, not in OpenCode's hook
bundle). Added zod to plugin/package.json so externalized requires
resolve at runtime.

DEL-5 (#2087): Delete the never-wired GeminiAgent → Claude fallback.
fallbackAgent was always null in production. On 429 the agent now
throws cleanly (message stays pending for retry). Removed
setFallbackAgent, FallbackAgent interface, and the 429 fallback
branch from both GeminiAgent and OpenRouterAgent. Updated docs
that claimed automatic Claude fallback.

DEL-6 (#2127, #2098): Raise MAX_SESSION_WALL_CLOCK_MS from 4h to
24h. The timeout is a real guard against runaway-cost loops (per
issue #1590), but 4h kills legitimate long Claude Code days. 24h
preserves the guard while never hitting in normal use. No knob —
a session approaching this age is a bug worth investigating, not
a value worth tuning.

DEL-8 (#2054): Delete installCLI() alias function. Saves 4 keystrokes
at the cost of cross-platform shell-config mutation surface — not
worth it. Canonical entry is npx claude-mem (and bunx). Uninstall
now strips legacy alias/function lines from ~/.bashrc, ~/.zshrc,
and the PowerShell profile.

Closes #2087, #2098, #2113, #2127, #2054.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: de-hardcode worker port + multi-account commit (Phase 3: CON-2 + DEL-7)

Replace hardcoded 37777 fallbacks with SettingsDefaultsManager.get(
'CLAUDE_MEM_WORKER_PORT') in npx-cli (runtime/install/uninstall),
opencode-plugin, OpenClaw installer, SearchRoutes example URLs.
Timeline-report SKILL.md now resolves WORKER_PORT from settings.json
at the top and uses ${WORKER_PORT} in all curl invocations.
Remaining 37777 literals are doc comments + viewer build-time form-
field placeholder (which is replaced by /api/settings on mount).

hooks.json: add cygpath POSIX→Windows path translation between _R
resolution and node invocation. No-op on macOS/Linux. Closes the
Windows + Git Bash MODULE_NOT_FOUND in #2109.

CLAUDE.md gains a Multi-account section documenting CLAUDE_MEM_DATA_DIR
+ optional CLAUDE_MEM_WORKER_PORT — every existing path/port code
path now honors them.

Closes #2103, #2109, #2101.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: install/uninstall improvements (Phase 7: #2106)

5 fixes for the install/uninstall flow:

Item 1 — multiselect default. install.ts no longer pre-selects every
detected IDE; user explicitly opts in.

Item 3 — shutdown-before-overwrite. New
src/services/install/shutdown-helper.ts shared by install and
uninstall: POSTs /api/admin/shutdown then polls /api/health until
the worker stops responding. install calls it before
copyPluginToMarketplace so reinstall over a running worker doesn't
conflict; uninstall calls it before deletion.

Item 4 — uninstall path coverage. Removes ~/.npm/_npx/*/node_modules/
claude-mem, ~/.cache/claude-cli-nodejs/*/mcp-logs-plugin-claude-mem-*,
~/.claude/plugins/data/claude-mem-thedotmack/. Best-effort: per-path
try/catch so a single permission failure doesn't abort uninstall.
chroma-mcp shutdown is implicit via the worker's GracefulShutdown
cascade in item 3's helper.

Item 5 — install summary documents "Close all Claude Code sessions
before uninstalling, or ~/.claude-mem will be recreated by active
hooks."

Item 6 — real-port query. After install, fetches /api/health on the
configured port with 3s timeout. Reports actually-bound port if the
response carries it; falls back to requested port. No retry loop.

Closes #2106 (items 1, 3, 4, 5, 6). Items 2, 7 closed separately
as already-fixed and insufficient-detail.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: pin chroma-mcp to 0.2.6 (Phase 8: DEL-3 lite)

Replace unpinned 'chroma-mcp' arg with chroma-mcp==0.2.6 in both
local and remote modes. Pinning makes installs deterministic across
machines and across time, eliminating the dependency-drift class
of bugs.

Verified 0.2.6 in a clean uv cache: starts cleanly, no httpcore/
httpx ImportError, no --with flags needed. The --with flags removed
in a0dd516c are not required at this pin (transitive deps resolve
correctly when the top-level version is fixed).

#2102's three protections (transport cleanup on failure, stale onclose
handler guard, 10s reconnect backoff) confirmed intact.

Closes #2046, #2085, #2102.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test: update stale assertions for per-UID port + migration 30 (Phase 9)

SettingsDefaultsManager.CLAUDE_MEM_WORKER_PORT default is per-UID
(37700 + uid%100), not literal '37777'. Three assertions in
settings-defaults-manager.test.ts now compute the expected value
the same way the source does.

migration-runner.test.ts: drop expect(versions).toContain(19)
(version 19 was a noop never recorded — pre-existing bug at parent),
add expect(versions).toContain(30) for the new observations.metadata
column added in Phase 5.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile P1/P2 review comments on PR #2141

P1: spawnDaemon return value was unchecked in worker-service.ts restart
case, so a failed spawn silently exited 0 with a misleading "Worker
restart spawned" log. Now error and exit 1 when restartPid is undefined.

P2: shutdown-helper.ts health-poll catch treated AbortError (timeout)
the same as connection-refused, so a slow worker could be reported
confirmedStopped while still holding file locks. Now distinguish:
AbortError continues polling; other errors return confirmedStopped.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* build: rebuild plugin artifacts after merging main

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address CodeRabbit review comments on PR #2141

- hooks.json: quote $HOME in cache lookup so paths with spaces work
- timeline-report SKILL.md: fall back when process.getuid is unavailable (Windows)
- opencode-plugin: validate CLAUDE_MEM_WORKER_PORT before using
- uninstall.ts: only strip alias lines, not function declarations (multi-line bodies left intact)
- MemoryRoutes: trim whitespace-only project before precedence resolution
- SessionStore migration 21: preserve metadata column if observations already has it
- stdin-reader test: restore full property descriptor to avoid cross-test pollution

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-25 21:23:24 -07:00
Alex Newman 5769f00827 perf(chroma): cache backfill watermarks in JSON to skip per-restart Chroma scans
Worker restarts triggered a full Chroma metadata scan for every project on every
boot to figure out which sqlite ids were already embedded. With 253 projects and
~92k embeddings, this pegged chroma-mcp at 100-422% CPU on every spawn.

Replace the scan with ~/.claude-mem/chroma-sync-state.json — per-project highest
synced sqlite_id watermarks for observations/summaries/prompts. Backfill switches
from "id NOT IN (huge list)" to "id > watermark"; live syncs bump the watermark
on success; one-time bootstrap derives initial watermarks from a single Chroma
scan if the state file is missing.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-25 14:05:48 -07:00
Alex Newman 94d592f212 perf: streamline worker startup and consolidate database connections (#2122)
* docs: pathfinder refactor corpus + Node 20 preflight

Adds the PATHFINDER-2026-04-22 principle-driven refactor plan (11 docs,
cross-checked PASS) plus the exploratory PATHFINDER-2026-04-21 corpus
that motivated it. Bumps engines.node to >=20.0.0 per the ingestion-path
plan preflight (recursive fs.watch). Adds the pathfinder skill.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 01 — data integrity

Schema, UNIQUE constraints, self-healing claim, Chroma upsert fallback.

- Phase 1: fresh schema.sql regenerated at post-refactor shape.
- Phase 2: migrations 23+24 — rebuild pending_messages without
  started_processing_at_epoch; UNIQUE(session_id, tool_use_id);
  UNIQUE(memory_session_id, content_hash) on observations; dedup
  duplicate rows before adding indexes.
- Phase 3: claimNextMessage rewritten to self-healing query using
  worker_pid NOT IN live_worker_pids; STALE_PROCESSING_THRESHOLD_MS
  and the 60-s stale-reset block deleted.
- Phase 4: DEDUP_WINDOW_MS and findDuplicateObservation deleted;
  observations.insert now uses ON CONFLICT DO NOTHING.
- Phase 5: failed-message purge block deleted from worker-service
  2-min interval; clearFailedOlderThan method deleted.
- Phase 6: repairMalformedSchema and its Python subprocess repair
  path deleted from Database.ts; SQLite errors now propagate.
- Phase 7: Chroma delete-then-add fallback gated behind
  CHROMA_SYNC_FALLBACK_ON_CONFLICT env flag as bridge until
  Chroma MCP ships native upsert.
- Phase 8: migration 19 no-op block absorbed into fresh schema.sql.

Verification greps all return 0 matches. bun test tests/sqlite/
passes 63/63. bun run build succeeds.

Plan: PATHFINDER-2026-04-22/01-data-integrity.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 02 — process lifecycle

OS process groups replace hand-rolled reapers. Worker runs until
killed; orphans are prevented by detached spawn + kill(-pgid).

- Phase 1: src/services/worker/ProcessRegistry.ts DELETED. The
  canonical registry at src/supervisor/process-registry.ts is the
  sole survivor; SDK spawn site consolidated into it via new
  createSdkSpawnFactory/spawnSdkProcess/getSdkProcessForSession/
  ensureSdkProcessExit/waitForSlot helpers.
- Phase 2: SDK children spawn with detached:true + stdio:
  ['ignore','pipe','pipe']; pgid recorded on ManagedProcessInfo.
- Phase 3: shutdown.ts signalProcess teardown uses
  process.kill(-pgid, signal) on Unix when pgid is recorded;
  Windows path unchanged (tree-kill/taskkill).
- Phase 4: all reaper intervals deleted — startOrphanReaper call,
  staleSessionReaperInterval setInterval (including the co-located
  WAL checkpoint — SQLite's built-in wal_autocheckpoint handles
  WAL growth without an app-level timer), killIdleDaemonChildren,
  killSystemOrphans, reapOrphanedProcesses, reapStaleSessions, and
  detectStaleGenerator. MAX_GENERATOR_IDLE_MS and MAX_SESSION_IDLE_MS
  constants deleted.
- Phase 5: abandonedTimer — already 0 matches; primary-path cleanup
  via generatorPromise.finally() already lives in worker-service
  startSessionProcessor and SessionRoutes ensureGeneratorRunning.
- Phase 6: evictIdlestSession and its evict callback deleted from
  SessionManager. Pool admission gates backpressure upstream.
- Phase 7: SDK-failure fallback — SessionManager has zero matches
  for fallbackAgent/Gemini/OpenRouter. Failures surface to hooks
  via exit code 2 through SessionRoutes error mapping.
- Phase 8: ensureWorkerRunning in worker-utils.ts rewritten to
  lazy-spawn — consults isWorkerPortAlive (which gates
  captureProcessStartToken for PID-reuse safety via commit
  99060bac), then spawns detached with unref(), then
  waitForWorkerPort({ attempts: 3, backoffMs: 250 }) hand-rolled
  exponential backoff 250→500→1000ms. No respawn npm dep.
- Phase 9: idle self-shutdown — zero matches for
  idleCheck/idleTimeout/IDLE_MAX_MS/idleShutdown. Worker exits
  only on external SIGTERM via supervisor signal handlers.

Three test files that exercised deleted code removed:
tests/worker/process-registry.test.ts,
tests/worker/session-lifecycle-guard.test.ts,
tests/services/worker/reap-stale-sessions.test.ts.
Pass count: 1451 → 1407 (-44), all attributable to deleted test
files. Zero new failures. 31 pre-existing failures remain
(schema-repair suite, logger-usage-standards, environmental
openclaw / plugin-distribution) — none introduced by Plan 02.

All 10 verification greps return 0. bun run build succeeds.

Plan: PATHFINDER-2026-04-22/02-process-lifecycle.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 04 (narrowed) — search fail-fast

Phases 3, 5, 6 only. Plan-doc inaccuracies for phases 1/2/4/7/8/9
deferred for plan reconciliation:
  - Phase 1/2: ObservationRow type doesn't exist; the four
    "formatters" operate on three incompatible types.
  - Phase 4: RECENCY_WINDOW_MS already imported from
    SEARCH_CONSTANTS at every call site.
  - Phase 7: getExistingChromaIds is NOT @deprecated and has an
    active caller in ChromaSync.backfillMissingSyncs.
  - Phase 8: estimateTokens already consolidated.
  - Phase 9: knowledge-corpus rewrite blocked on PG-3
    prompt-caching cost smoke test.

Phase 3 — Delete SearchManager.findByConcept/findByFile/findByType.
SearchRoutes handlers (handleSearchByConcept/File/Type) now call
searchManager.getOrchestrator().findByXxx() directly via new
getter accessors on SearchManager. ~250 LoC deleted.

Phase 5 — Fail-fast Chroma. Created
src/services/worker/search/errors.ts with ChromaUnavailableError
extends AppError(503, 'CHROMA_UNAVAILABLE'). Deleted
SearchOrchestrator.executeWithFallback's Chroma-failed
SQLite-fallback branch; runtime Chroma errors now throw 503.
"Path 3" (chromaSync was null at construction — explicit-
uninitialized config) preserved as legitimate empty-result state
per plan text. ChromaSearchStrategy.search no longer wraps in
try/catch — errors propagate.

Phase 6 — Delete HybridSearchStrategy three try/catch silent
fallback blocks (findByConcept, findByType, findByFile) at lines
~82-95, ~120-132, ~161-172. Removed `fellBack` field from
StrategySearchResult type and every return site
(SQLiteSearchStrategy, BaseSearchStrategy.emptyResult,
SearchOrchestrator).

Tests updated (Principle 7 — delete in same PR):
  - search-orchestrator.test.ts: "fall back to SQLite" rewritten
    as "throw ChromaUnavailableError (HTTP 503)".
  - chroma/hybrid/sqlite-search-strategy tests: rewritten to
    rejects.toThrow; removed fellBack assertions.

Verification: SearchManager.findBy → 0; fellBack → 0 in src/.
bun test tests/worker/search/ → 122 pass, 0 fail.
bun test (suite-wide) → 1407 pass, baseline maintained, 0 new
failures. bun run build succeeds.

Plan: PATHFINDER-2026-04-22/04-read-path.md (Phases 3, 5, 6)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 03 — ingestion path

Fail-fast parser, direct in-process ingest, recursive fs.watch,
DB-backed tool pairing. Worker-internal HTTP loopback eliminated.

- Phase 0: Created src/services/worker/http/shared.ts exporting
  ingestObservation/ingestPrompt/ingestSummary as direct
  in-process functions plus ingestEventBus (Node EventEmitter,
  reusing existing pattern — no third event bus introduced).
  setIngestContext wires the SessionManager dependency from
  worker-service constructor.
- Phase 1: src/sdk/parser.ts collapsed to one parseAgentXml
  returning { valid:true; kind: 'observation'|'summary'; data }
  | { valid:false; reason: string }. Inspects root element;
  <skip_summary reason="…"/> is a first-class summary case
  with skipped:true. NEVER returns undefined. NEVER coerces.
- Phase 2: ResponseProcessor calls parseAgentXml exactly once,
  branches on the discriminated union. On invalid → markFailed
  + logger.warn(reason). On observation → ingestObservation.
  On summary → ingestSummary then emit summaryStoredEvent
  { sessionId, messageId } (consumed by Plan 05's blocking
  /api/session/end).
- Phase 3: Deleted consecutiveSummaryFailures field
  (ResponseProcessor + SessionManager + worker-types) and
  MAX_CONSECUTIVE_SUMMARY_FAILURES constant. Circuit-breaker
  guards and "tripped" log lines removed.
- Phase 4: coerceObservationToSummary deleted from sdk/parser.ts.
- Phase 5: src/services/transcripts/watcher.ts rescan setInterval
  replaced with fs.watch(transcriptsRoot, { recursive: true,
  persistent: true }) — Node 20+ recursive mode.
- Phase 6: src/services/transcripts/processor.ts pendingTools
  Map deleted. tool_use rows insert with INSERT OR IGNORE on
  UNIQUE(session_id, tool_use_id) (added by Plan 01). New
  pairToolUsesByJoin query in PendingMessageStore for read-time
  pairing (UNIQUE INDEX provides idempotency; explicit consumer
  not yet wired).
- Phase 7: HTTP loopback at processor.ts:252 replaced with
  direct ingestObservation call. maybeParseJson silent-passthrough
  rewritten to fail-fast (throws on malformed JSON).
- Phase 8: src/utils/tag-stripping.ts countTags + stripTagsInternal
  collapsed into one alternation regex, single-pass over input.
- Phase 9: src/utils/transcript-parser.ts (dead TranscriptParser
  class) deleted. The active extractLastMessage at
  src/shared/transcript-parser.ts:41-144 is the sole survivor.

Tests updated (Principle 7 — same-PR delete):
  - tests/sdk/parser.test.ts + parse-summary.test.ts: rewritten
    to assert discriminated-union shape; coercion-specific
    scenarios collapse into { valid:false } assertions.
  - tests/worker/agents/response-processor.test.ts: circuit-breaker
    describe block skipped; non-XML/empty-response tests assert
    fail-fast markFailed behavior.

Verification: every grep returns 0. transcript-parser.ts deleted.
bun run build succeeds. bun test → 1399 pass / 28 fail / 7 skip
(net -8 pass = the 4 retired circuit-breaker tests + 4 collapsed
parser cases). Zero new failures vs baseline.

Deferred (out of Plan 03 scope, will land in Plan 06): SessionRoutes
HTTP route handlers still call sessionManager.queueObservation
inline rather than the new shared helpers — the helpers are ready,
the route swap is mechanical and belongs with the Zod refactor.

Plan: PATHFINDER-2026-04-22/03-ingestion-path.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 05 — hook surface

Worker-call plumbing collapsed to one helper. Polling replaced by
server-side blocking endpoint. Fail-loud counter surfaces persistent
worker outages via exit code 2.

- Phase 1: plugin/hooks/hooks.json — three 20-iteration `for i in
  1..20; do curl -sf .../health && break; sleep 0.1; done` shell
  retry wrappers deleted. Hook commands invoke their bun entry
  point directly.
- Phase 2: src/shared/worker-utils.ts — added
  executeWithWorkerFallback<T>(url, method, body) returning
  T | { continue: true; reason?: string }. All 8 hook handlers
  (observation, session-init, context, file-context, file-edit,
  summarize, session-complete, user-message) rewritten to use
  it instead of duplicating the ensureWorkerRunning →
  workerHttpRequest → fallback sequence.
- Phase 3: blocking POST /api/session/end in SessionRoutes.ts
  using validateBody + sessionEndSchema (z.object({sessionId})).
  One-shot ingestEventBus.on('summaryStoredEvent') listener,
  30 s timer, req.aborted handler — all share one cleanup so
  the listener cannot leak. summarize.ts polling loop, plus
  MAX_WAIT_FOR_SUMMARY_MS / POLL_INTERVAL_MS constants, deleted.
- Phase 4: src/shared/hook-settings.ts — loadFromFileOnce()
  memoizes SettingsDefaultsManager.loadFromFile per process.
  Per-handler settings reads collapsed.
- Phase 5: src/shared/should-track-project.ts — single exclusion
  check entry; isProjectExcluded no longer referenced from
  src/cli/handlers/.
- Phase 6: cwd validation pushed into adapter normalizeInput
  (all 6 adapters: claude-code, cursor, raw, gemini-cli,
  windsurf). New AdapterRejectedInput error in
  src/cli/adapters/errors.ts. Handler-level isValidCwd checks
  deleted from file-edit.ts and observation.ts. hook-command.ts
  catches AdapterRejectedInput → graceful fallback.
- Phase 7: session-init.ts conditional initAgent guard deleted;
  initAgent is idempotent. tests/hooks/context-reinjection-guard
  test (validated the deleted conditional) deleted in same PR
  per Principle 7.
- Phase 8: fail-loud counter at ~/.claude-mem/state/hook-failures
  .json. Atomic write via .tmp + rename. CLAUDE_MEM_HOOK_FAIL_LOUD
  _THRESHOLD setting (default 3). On consecutive worker-unreachable
  ≥ N: process.exit(2). On success: reset to 0. NOT a retry.
- Phase 9: ensureWorkerAliveOnce() module-scope memoization
  wrapping ensureWorkerRunning. executeWithWorkerFallback calls
  the memoized version.

Minimal validateBody middleware stub at
src/services/worker/http/middleware/validateBody.ts. Plan 06 will
expand with typed inference + error envelope conventions.

Verification: 4/4 grep targets pass. bun run build succeeds.
bun test → 1393 pass / 28 fail / 7 skip; -6 pass attributable
solely to deleted context-reinjection-guard test file. Zero new
failures vs baseline.

Plan: PATHFINDER-2026-04-22/05-hook-surface.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 06 — API surface

One Zod-based validator wrapping every POST/PUT. Rate limiter,
diagnostic endpoints, and shutdown wrappers deleted. Failure-
marking consolidated to one helper.

- Phase 1 (preflight): zod@^3 already installed.
- Phase 2: validateBody middleware confirmed at canonical shape
  in src/services/worker/http/middleware/validateBody.ts —
  safeParse → 400 { error: 'ValidationError', issues: [...] }
  on failure, replaces req.body with parsed value on success.
- Phase 3: Per-route Zod schemas declared at the top of each
  route file. 24 POST endpoints across SessionRoutes,
  CorpusRoutes, DataRoutes, MemoryRoutes, SearchRoutes,
  LogsRoutes, SettingsRoutes now wrap with validateBody().
  /api/session/end (Plan 05) confirmed using same middleware.
- Phase 4: validateRequired() deleted from BaseRouteHandler
  along with every call site. Inline coercion helpers
  (coerceStringArray, coercePositiveInteger) and inline
  if (!req.body...) guards deleted across all route files.
- Phase 5: Rate limiter middleware and its registration deleted
  from src/services/worker/http/middleware.ts. Worker binds
  127.0.0.1:37777 — no untrusted caller.
- Phase 6: viewer.html cached at module init in ViewerRoutes.ts
  via fs.readFileSync; served as Buffer with text/html content
  type. SKILL.md + per-operation .md files cached in
  Server.ts as Map<string, string>; loadInstructionContent
  helper deleted. NO fs.watch, NO TTL — process restart is the
  cache-invalidation event.
- Phase 7: Four diagnostic endpoints deleted from DataRoutes.ts
  — /api/pending-queue (GET), /api/pending-queue/process (POST),
  /api/pending-queue/failed (DELETE), /api/pending-queue/all
  (DELETE). Helper methods that ONLY served them
  (getQueueMessages, getStuckCount, getRecentlyProcessed,
  clearFailed, clearAll) deleted from PendingMessageStore.
  KEPT: /api/processing-status (observability), /health
  (used by ensureWorkerRunning).
- Phase 8: stopSupervisor wrapper deleted from supervisor/index.ts.
  GracefulShutdown now calls getSupervisor().stop() directly.
  Two functions retained with clear roles:
    - performGracefulShutdown — worker-side 6-step shutdown
    - runShutdownCascade — supervisor-side child teardown
      (process.kill(-pgid), Windows tree-kill, PID-file cleanup)
  Each has unique non-trivial logic and a single canonical caller.
- Phase 9: transitionMessagesTo(status, filter) is the sole
  failure-marking path on PendingMessageStore. Old methods
  markSessionMessagesFailed and markAllSessionMessagesAbandoned
  deleted along with all callers (worker-service,
  SessionCompletionHandler, tests/zombie-prevention).

Tests updated (Principle 7 same-PR delete): coercion test files
refactored to chain validateBody → handler. Zombie-prevention
tests rewritten to call transitionMessagesTo.

Verification: all 4 grep targets → 0. bun run build succeeds.
bun test → 1393 pass / 28 fail / 7 skip — exact match to
baseline. Zero new failures.

Plan: PATHFINDER-2026-04-22/06-api-surface.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor: land PATHFINDER Plan 07 — dead code sweep

ts-prune-driven sweep across the tree after Plans 01-06 landed.
Deleted unused exports, orphan helpers, and one fully orphaned
file. Earlier-plan deletions verified.

Deleted:
- src/utils/bun-path.ts (entire file — getBunPath, getBunPathOrThrow,
  isBunAvailable: zero importers)
- bun-resolver.getBunVersionString: zero callers
- PendingMessageStore.retryMessage / resetProcessingToPending /
  abortMessage: superseded by transitionMessagesTo (Plan 06 Phase 9)
- EnvManager.MANAGED_CREDENTIAL_KEYS, EnvManager.setCredential:
  zero callers
- CodexCliInstaller.checkCodexCliStatus: zero callers; no status
  command exists in npx-cli
- Two "REMOVED: cleanupOrphanedSessions" stale-fence comments

Kept (with documented justification):
- Public API surface in dist/sdk/* (parseAgentXml, prompt
  builders, ParsedObservation, ParsedSummary, ParseResult,
  SUMMARY_MODE_MARKER) — exported via package.json sdk path.
- generateContext / loadContextConfig / token utilities — used
  via dynamic await import('../../../context-generator.js') in
  worker SearchRoutes.
- MCP_IDE_INSTALLERS, install/uninstall functions for codex/goose
  — used via dynamic await import in npx-cli/install.ts +
  uninstall.ts (ts-prune cannot trace dynamic imports).
- getExistingChromaIds — active caller in
  ChromaSync.backfillMissingSyncs (Plan 04 narrowed scope).
- processPendingQueues / getSessionsWithPendingMessages — active
  orphan-recovery caller in worker-service.ts plus
  zombie-prevention test coverage.
- StoreAndMarkCompleteResult legacy alias — return-type annotation
  in same file.
- All Database.ts barrel re-exports — used downstream.

Earlier-plan verification:
- Plan 03 Phase 9: VERIFIED — src/utils/transcript-parser.ts
  is gone; TranscriptParser has 0 references in src/.
- Plan 01 Phase 8: VERIFIED — migration 19 no-op absorbed.
- SessionStore.ts:52-70 consolidation NOT executed (deferred):
  the methods are not thin wrappers but ~900 LoC of bodies, and
  two methods are documented as intentional mirrors so the
  context-generator.cjs bundle stays schema-consistent without
  pulling MigrationRunner. Deserves its own plan, not a sweep.

Verification: TranscriptParser → 0; transcript-parser.ts → gone;
no commented-out code markers remain. bun run build succeeds.
bun test → 1393 pass / 28 fail / 7 skip — EXACT match to
baseline. Zero regressions.

Plan: PATHFINDER-2026-04-22/07-dead-code.md

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: remove residual ProcessRegistry comment reference

Plan 07 dead-code sweep missed one comment-level reference to the
deleted in-memory ProcessRegistry class in SessionManager.ts:347.
Rewritten to describe the supervisor.json scope without naming the
deleted class, completing the verification grep target.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile review (P1 + 2× P2)

P1 — Plan 05 Phase 3 blocking endpoint was non-functional:
executeWithWorkerFallback used HEALTH_CHECK_TIMEOUT_MS (3 s) for
the POST /api/session/end call, but the server holds the
connection for SERVER_SIDE_SUMMARY_TIMEOUT_MS (30 s). Client
always raced to a "timed out" rejection that isWorkerUnavailable
classified as worker-unreachable, so the hook silently degraded
instead of waiting for summaryStoredEvent.
  - Added optional timeoutMs to executeWithWorkerFallback,
    forwarded to workerHttpRequest.
  - summarize.ts call site now passes 35_000 (5 s above server
    hold window).

P2 — ingestSummary({ kind: 'parsed' }) branch was dead code:
ResponseProcessor emitted summaryStoredEvent directly via the
event bus, bypassing the centralized helper that the comment
claimed was the single source.
  - ResponseProcessor now calls ingestSummary({ kind: 'parsed',
    sessionDbId, messageId, contentSessionId, parsed }) so the
    event-emission path is single-sourced.
  - ingestSummary's requireContext() resolution moved inside the
    'queue' branch (the only branch that needs sessionManager /
    dbManager). 'parsed' is a pure event-bus emission and
    doesn't need worker-internal context — fixes mocked
    ResponseProcessor unit tests that don't call
    setIngestContext.

P2 — isWorkerFallback could false-positive on legitimate API
responses whose schema includes { continue: true, ... }:
  - Added a Symbol.for('claude-mem/worker-fallback') brand to
    WorkerFallback. isWorkerFallback now checks the brand, not
    a duck-typed property name.

Verification: bun run build succeeds. bun test → 1393 pass /
28 fail / 7 skip — exact baseline match. Zero new failures.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile iteration 2 (P1 + P2)

P1 — summaryStoredEvent fired regardless of whether the row was
persisted. ResponseProcessor's call to ingestSummary({ kind:
'parsed' }) ran for every parsed.kind === 'summary' even when
result.summaryId came back null (e.g. FK violation, null
memory_session_id at commit). The blocking /api/session/end
endpoint then returned { ok: true } and the Stop hook logged
'Summary stored' for a non-existent row.

  - Gate ingestSummary call on (parsed.data.skipped ||
    session.lastSummaryStored). Skipped summaries are an explicit
    no-op bypass and still confirm; real summaries only confirm
    when storage actually wrote a row.
  - Non-skipped + summaryId === null path logs a warn and lets
    the server-side timeout (504) surface to the hook instead of
    a false ok:true.

P2 — PendingMessageStore.enqueue() returns 0 when INSERT OR
IGNORE suppresses a duplicate (the UNIQUE(session_id, tool_use_id)
constraint added by Plan 01 Phase 1). The two callers
(SessionManager.queueObservation and queueSummarize) previously
logged 'ENQUEUED messageId=0' which read like a row was inserted.

  - Branch on messageId === 0 and emit a 'DUP_SUPPRESSED' debug
    log instead of the misleading ENQUEUED line. No behavior
    change — the duplicate is still correctly suppressed by the
    DB (Principle 3); only the log surface is corrected.
  - confirmProcessed is never called with the enqueue() return
    value (it operates on session.processingMessageIds[] from
    claimNextMessage), so no caller is broken; the visibility
    fix prevents future misuse.

Verification: bun run build succeeds. bun test → 1393 pass /
28 fail / 7 skip — exact baseline match. Zero new failures.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile iteration 3 (P1 + 2× P2)

- P1 worker-service.ts: wire ensureGeneratorRunning into the ingest
  context after SessionRoutes is constructed. setIngestContext runs
  before routes exist, so transcript-watcher observations queued via
  ingestObservation() had no way to auto-start the SDK generator.
  Added attachIngestGeneratorStarter() to patch the callback in.
- P2 shared.ts: IngestEventBus now sets maxListeners to 0. Concurrent
  /api/session/end calls register one listener each and clean up on
  completion, so the default-10 warning fires spuriously under normal
  load.
- P2 SessionRoutes.ts: handleObservationsByClaudeId now delegates to
  ingestObservation() instead of duplicating skip-tool / meta /
  privacy / queue logic. Single helper, matching the Plan 03 goal.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile iteration 4 (P1 tool-pair + P2 parse/path/doc)

- processor.handleToolResult: restore in-memory tool-use→tool-result
  pairing via session.pendingTools for schemas (e.g. Codex) whose
  tool_result events carry only tool_use_id + output. Without this,
  neither handler fired — all tool observations silently dropped.
- processor.maybeParseJson: return raw string on parse failure instead
  of throwing. Previously a single malformed JSON-shaped field caused
  handleLine's outer catch to discard the entire transcript line.
- watcher.deepestNonGlobAncestor: split on / and \\, emit empty string
  for purely-glob inputs so the caller skips the watch instead of
  anchoring fs.watch at the filesystem root. Windows-compatible.
- PendingMessageStore.enqueue: tighten docstring — callers today only
  log on the returned id; the SessionManager branches on id === 0.

* fix: forward tool_use_id through ingestObservation (Greptile iter 5)

P1 — Plan 01's UNIQUE(content_session_id, tool_use_id) dedup never
fired because the new shared ingest path dropped the toolUseId before
queueObservation. SQLite treats NULL values as distinct for UNIQUE,
so every replayed transcript line landed a duplicate row.

- shared.ingestObservation: forward payload.toolUseId to
  queueObservation so INSERT OR IGNORE can actually collapse.
- SessionRoutes.handleObservationsByClaudeId: destructure both
  tool_use_id (HTTP convention) and toolUseId (JS convention) from
  req.body and pass into ingestObservation.
- observationsByClaudeIdSchema: declare both keys explicitly so the
  validator doesn't rely on .passthrough() alone.

* fix: drop dead pairToolUsesByJoin, close session-end listener race

- PendingMessageStore: delete pairToolUsesByJoin. The method was never
  called and its self-join semantics are structurally incompatible
  with UNIQUE(content_session_id, tool_use_id): INSERT OR IGNORE
  collapses any second row with the same pair, so a self-join can
  only ever match a row to itself. In-memory pendingTools in
  processor.ts remains the pairing path for split-event schemas.

- IngestEventBus: retain a short-lived (60s) recentStored map keyed
  by sessionId. Populated on summaryStoredEvent emit, evicted on
  consume or TTL.

- handleSessionEnd: drain the recent-events buffer before attaching
  the listener. Closes the register-after-emit race where the summary
  can persist between the hook's summarize POST and its session/end
  POST — previously that window returned 504 after the 30s timeout.

* chore: merge origin/main into vivacious-teeth

Resolves conflicts with 15 commits on main (v12.3.9, security
observation types, Telegram notifier, PID-reuse worker start-guard).

Conflict resolution strategy:
- plugin/hooks/hooks.json, plugin/scripts/*.cjs, plugin/ui/viewer-bundle.js:
  kept ours — PATHFINDER Plan 05 deletes the for-i-in-1-to-20 curl retry
  loops and the built artifacts regenerate on build.
- src/cli/handlers/summarize.ts: kept ours — Plan 05 blocking
  POST /api/session/end supersedes main's fire-and-forget path.
- src/services/worker-service.ts: kept ours — Plan 05 ingest bus +
  summaryStoredEvent supersedes main's SessionCompletionHandler DI
  refactor + orphan-reaper fallback.
- src/services/worker/http/routes/SessionRoutes.ts: kept ours — same
  reason; generator .finally() Stop-hook self-clean is a guard for a
  path our blocking endpoint removes.
- src/services/worker/http/routes/CorpusRoutes.ts: merged — added
  security_alert / security_note to ALLOWED_CORPUS_TYPES (feature from
  #2084) while preserving our Zod validateBody schema.

Typecheck: 294 errors (vs 298 pre-merge). No new errors introduced; all
remaining are pre-existing (Component-enum gaps, DOM lib for viewer,
bun:sqlite types).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile P2 findings

1) SessionRoutes.handleSessionEnd was the only route handler not wrapped
   in wrapHandler — synchronous exceptions would hang the client rather
   than surfacing as 500s. Wrap it like every other handler.

2) processor.handleToolResult only consumed the session.pendingTools
   entry when the tool_result arrived without a toolName. In the
   split-schema path where tool_result carries both toolName and toolId,
   the entry was never deleted and the map grew for the life of the
   session. Consume the entry whenever toolId is present.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: typing cleanup and viewer tsconfig split for PR feedback

- Add explicit return types for SessionStore query methods
- Exclude src/ui/viewer from root tsconfig, give it its own DOM-typed config
- Add bun to root tsconfig types, plus misc typing tweaks flagged by Greptile
- Rebuilt plugin/scripts/* artifacts

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: address Greptile P2 findings (iter 2)

- PendingMessageStore.transitionMessagesTo: require sessionDbId (drop
  the unscoped-drain branch that would nuke every pending/processing
  row across all sessions if a future caller omitted the filter).
- IngestEventBus.takeRecentSummaryStored: make idempotent — keep the
  cached event until TTL eviction so a retried Stop hook's second
  /api/session/end returns immediately instead of hanging 30 s.
- TranscriptWatcher fs.watch callback: skip full glob scan for paths
  already tailed (JSONL appends fire on every line; only unknown
  paths warrant a rescan).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: call finalizeSession in terminal session paths (Greptile iter 3)

terminateSession and runFallbackForTerminatedSession previously called
SessionCompletionHandler.finalizeSession before removeSessionImmediate;
the refactor dropped those calls, leaving sdk_sessions.status='active'
for every session killed by wall-clock limit, unrecoverable error, or
exhausted fallback chain. The deleted reapStaleSessions interval was
the only prior backstop.

Re-wires finalizeSession (idempotent: marks completed, drains pending,
broadcasts) into both paths; no reaper reintroduced.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: GC failed pending_messages rows at startup (Greptile iter 4)

Plan 07 deleted clearFailed/clearFailedOlderThan as "dead code", but
with the periodic sweep also removed, nothing reaps status='failed'
rows now — they accumulate indefinitely. Since claimNextMessage's
self-healing subquery scans this table, unbounded growth degrades
claim latency over time.

Re-introduces clearFailedOlderThan and calls it once at worker startup
(not a reaper — one-shot, idempotent). 7-day retention keeps enough
history for operator inspection while bounding the table.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: finalize sessions on normal exit; cleanup hoist; share handler (iter 5)

1. startSessionProcessor success branch now calls completionHandler.
   finalizeSession before removeSessionImmediate. Hooks-disabled installs
   (and any Stop hook that fails before POST /api/sessions/complete) no
   longer leave sdk_sessions rows as status='active' forever. Idempotent
   — a subsequent /api/sessions/complete is a no-op.

2. Hoist SessionRoutes.handleSessionEnd cleanup declaration above the
   closures that reference it (TDZ safety; safe at runtime today but
   fragile if timeout ever shrinks).

3. SessionRoutes now receives WorkerService's shared SessionCompletionHandler
   instead of constructing its own — prevents silent divergence if the
   handler ever becomes stateful.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: stop runaway crash-recovery loop on dead sessions

Two distinct bugs were combining to keep a dead session restarting forever:

Bug 1 (uncaught "The operation was aborted."):
  child_process.spawn emits 'error' asynchronously for ENOENT/EACCES/abort
  signal aborts. spawnSdkProcess() never attached an 'error' listener, so
  any async spawn failure became uncaughtException and escaped to the
  daemon-level handler. Attach an 'error' listener immediately after spawn,
  before the !child.pid early-return, so async spawn errors are logged
  (with errno code) and swallowed locally.

Bug 2 (sliding-window limiter never trips on slow restart cadence):
  RestartGuard tripped only when restartTimestamps.length exceeded
  MAX_WINDOWED_RESTARTS (10) within RESTART_WINDOW_MS (60s). With the 8s
  exponential-backoff cap, only ~7-8 restarts fit in the window, so a dead
  session that fail-restart-fail-restart on 8s cycles would loop forever
  (consecutiveRestarts climbing past 30+ in observed logs). Add a
  consecutiveFailures counter that increments on every restart and resets
  only on recordSuccess(). Trip when consecutive failures exceed
  MAX_CONSECUTIVE_FAILURES (5) — meaning 5 restarts with zero successful
  processing in between proves the session is dead. Both guards now run in
  parallel: tight loops still trip the windowed cap; slow loops trip the
  consecutive-failure cap.

Also: when the SessionRoutes path trips the guard, drain pending messages
to 'abandoned' so the session does not reappear in
getSessionsWithPendingMessages and trigger another auto-start cycle. The
worker-service.ts path already does this via terminateSession.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* perf: streamline worker startup and consolidate database connections

1. Database Pooling: Modified DatabaseManager, SessionStore, and SessionSearch to share a single bun:sqlite connection, eliminating redundant file descriptors.
2. Non-blocking Startup: Refactored WorktreeAdoption and Chroma backfill to run in the background (fire-and-forget), preventing them from stalling core initialization.
3. Diagnostic Routes: Added /api/chroma/status and bypassed the initialization guard for health/readiness endpoints to allow diagnostics during startup.
4. Robust Search: Implemented reliable SQLite FTS5 fallback in SearchManager for when Chroma (uvx) fails or is unavailable.
5. Code Cleanup: Removed redundant loopback MCP checks and mangled initialization logic from WorkerService.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: hard-exclude observer-sessions from hooks; bundle migration 29 (#2124)

* fix: hard-exclude observer-sessions from hooks; backfill bundle migrations

Stop hook + SessionEnd hook were storing the SDK observer's own
init/continuation/summary prompts in user_prompts, leaking into the
viewer (meta-observation regression). 25 such rows accumulated.

- shouldTrackProject: hard-reject OBSERVER_SESSIONS_DIR (and its subtree)
  before consulting user-configured exclusion globs.
- summarize.ts (Stop) and session-complete.ts (SessionEnd): early-return
  when shouldTrackProject(cwd) is false, so the observer's own hooks
  cannot bootstrap the worker or queue a summary against the meta-session.
- SessionRoutes: cap user-prompt body at 256 KiB at the session-init
  boundary so a runaway observer prompt cannot blow up storage.
- SessionStore: add migration 29 (UNIQUE(memory_session_id, content_hash)
  on observations) inline so bundled artifacts (worker-service.cjs,
  context-generator.cjs) stay schema-consistent — without it, the
  ON CONFLICT clause in observation inserts throws.
- spawnSdkProcess: stdio[stdin] from 'ignore' to 'pipe' so the
  supervisor can actually feed the observer's stdin.

Also rebuilds plugin/scripts/{worker-service,context-generator}.cjs.

* fix: walk back to UTF-8 boundary on prompt truncation (Greptile P2)

Plain Buffer.subarray at MAX_USER_PROMPT_BYTES can land mid-codepoint,
which the utf8 decoder silently rewrites to U+FFFD. Walk back over any
continuation bytes (0b10xxxxxx) before decoding so the truncated prompt
ends on a valid sequence boundary instead of a replacement character.

* fix: cross-platform observer-dir containment; clarify SDK stdin pipe

claude-review feedback on PR #2124.

- shouldTrackProject: literal `cwd.startsWith(OBSERVER_SESSIONS_DIR + '/')`
  hard-coded a POSIX separator and missed Windows backslash paths plus any
  trailing-slash variance. Switched to a path.relative-based isWithin()
  helper so Windows hook input under observer-sessions\\... is also excluded.
- spawnSdkProcess: added a comment explaining why stdin must be 'pipe' —
  SpawnedSdkProcess.stdin is typed NonNullable and the Claude Agent SDK
  consumes that pipe; 'ignore' would null it and the null-check below
  would tear the child down on every spawn.

* fix: make Stop hook fire-and-forget; remove dead /api/session/end

The Stop hook was awaiting a 35-second long-poll on /api/session/end,
which the worker held open until the summary-stored event fired (or its
30s server-side timeout elapsed). Followed by another await on
/api/sessions/complete. Three sequential awaits, the middle one a 30s
hold — not fire-and-forget despite repeated requests.

The Stop hook now does ONE thing: POST /api/sessions/summarize to
queue the summary work and return. The worker drives the rest async.
Session-map cleanup is performed by the SessionEnd handler
(session-complete.ts), not duplicated here.

- summarize.ts: drop the /api/session/end long-poll and the trailing
  /api/sessions/complete await; ~40 lines removed; unused
  SessionEndResponse interface gone; header comment rewritten.
- SessionRoutes: delete handleSessionEnd, sessionEndSchema, the
  SERVER_SIDE_SUMMARY_TIMEOUT_MS constant, and the /api/session/end
  route registration. Drop the now-unused ingestEventBus and
  SummaryStoredEvent imports.
- ResponseProcessor + shared.ts + worker-utils.ts: update stale
  comments that referenced the dead endpoint. The IngestEventBus is
  left in place dormant (no listeners) for follow-up cleanup so this
  PR stays focused on the blocker.

Bundle artifact (worker-service.cjs) rebuilt via build-and-sync.

Verification:
- grep '/api/session/end' plugin/scripts/worker-service.cjs → 0
- grep 'timeoutMs:35' plugin/scripts/worker-service.cjs → 0
- Worker restarted clean, /api/health ok at pid 92368

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* deps: bump all dependencies to latest including majors

Upgrades: React 18→19, Express 4→5, Zod 3→4, TypeScript 5→6,
@types/node 20→25, @anthropic-ai/claude-agent-sdk 0.1→0.2,
@clack/prompts 0.9→1.2, plus minors. Adds Daily Maintenance section
to CLAUDE.md mandating latest-version policy across manifests.

Express 5 surfaced a race in Server.listen() where the 'error' handler
was attached after listen() was invoked; refactored to use
http.createServer with both 'error' and 'listening' handlers attached
before listen(), restoring port-conflict rejection semantics.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix: surface real chroma errors and add deep status probe

Replace the misleading "Vector search failed - semantic search unavailable.
Install uv... restart the worker." string in SearchManager with the actual
exception text from chroma_query_documents. The lying message blamed `uv`
for any failure — even when the real cause was a chroma-mcp transport
timeout, an empty collection, or a dead subprocess.

Also add /api/chroma/status?deep=1 backed by a new
ChromaMcpManager.probeSemanticSearch() that round-trips a real query
(chroma_list_collections + chroma_query_documents) instead of just
checking the stdio handshake. The cheap default path is unchanged.

Includes the diagnostic plan (PLAN-fix-mcp-search.md) and updated test
fixtures for the new structured failure message.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: rebuild worker-service bundle to match merged src

Bundle was stale after the squash merge of #2124 — it still contained
the old "Install uv... semantic search unavailable" string and lacked
probeSemanticSearch. Rebuilt via bun run build-and-sync.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* docs: address coderabbit feedback on PLAN-fix-mcp-search.md

- replace machine-specific /Users/alexnewman absolute paths with portable
  <repo-root> placeholder (MD-style portability)
- add blank lines around the TypeScript fenced block (MD031)
- tag the bare fenced block with `text` (MD040)

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-25 13:37:40 -07:00
Alex Newman d2eb89d27f fix: resolve all CodeRabbit review comments
Critical fixes:
- GeminiCliHooksInstaller: wrap install/uninstall prep in try/catch to maintain
  numeric return contract
- McpIntegrations: move mkdirSync inside try block for Goose installer

Major fixes:
- import-xml-observations: guard invalid dates before toISOString()
- runtime.ts: guard response.json() parsing
- WorktreeAdoption: delay adoptedSqliteIds mutation until SQL succeeds
- CursorHooksInstaller: move mkdirSync inside try block
- McpIntegrations: throw on failed claude-mem block replacement
- OpenClawInstaller: propagate parse failure instead of returning {}
- OpenClawInstaller: move mkdirSync inside try block
- WindsurfHooksInstaller: validate hooks.json shape with optional chaining
- timeline/queries: pass normalized Error directly to logger
- ChromaSync: use composite dedup key (entityType:id) to prevent cross-type collisions
- EnvManager: wrap preflight directory/file ops in try/catch with ENV logging

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-19 20:17:57 -07:00
Alex Newman 30a0ab4ddb fix: resolve Greptile review comments on error handling
- Remove spurious console.error in logger JSON.parse catch (expected control flow)
- Remove debug logging from hot PID cleanup loop (approved override)
- Replace unsafe `error as Error` casts with instanceof checks in ChromaSync, GeminiAgent, OpenRouterAgent
- Wrap non-Error FTS failures with new Error(String()) instead of dropping details

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-19 20:05:27 -07:00
Alex Newman a0dd516cd5 fix: resolve all 301 error handling anti-patterns across codebase
Systematic cleanup of every error handling anti-pattern detected by the
automated scanner. 289 issues fixed via code changes, 12 approved with
specific technical justifications.

Changes across 90 files:
- GENERIC_CATCH (141): Added instanceof Error type discrimination
- LARGE_TRY_BLOCK (82): Extracted helper methods to narrow try scope to ≤10 lines
- NO_LOGGING_IN_CATCH (65): Added logger/console calls for error visibility
- CATCH_AND_CONTINUE_CRITICAL_PATH (10): Added throw/return or approved overrides
- ERROR_STRING_MATCHING (2): Approved with rationale (no typed error classes)
- ERROR_MESSAGE_GUESSING (1): Replaced chained .includes() with documented pattern array
- PROMISE_CATCH_NO_LOGGING (1): Added logging to .catch() handler

Also fixes a detector bug where nested try/catch inside a catch block
corrupted brace-depth tracking, causing false positives.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-19 19:57:00 -07:00
Alex Newman 3e770df332 feat(worktree): query plumbing surfaces merged rows under parent project
ObservationCompiler.queryObservationsMulti and querySummariesMulti
WHERE clause extended with OR merged_into_project IN (...), so a
parent-project read pulls in rows originally written under any
child worktree's composite name once merged.

SearchManager wraps the Chroma project filter in \$or so semantic
search behaves identically. ChromaSync baseMetadata now carries
merged_into_project on new embeddings; existing rows are patched
retroactively by the adoption engine.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-16 19:24:10 -07:00
Alex Newman a7c3c4af2d feat(worktree): adoption engine for merged worktrees
Detects merged worktrees via git (worktree list --porcelain +
branch --merged HEAD), then stamps merged_into_project on SQLite
observations/summaries and propagates the same metadata to Chroma
in lockstep. `project` stays immutable; adoption is a virtual
pointer. Idempotent via IS NULL guard on UPDATE and by idempotent
Chroma metadata writes. SQL is source of truth — Chroma failures
are logged but don't roll back SQL.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
2026-04-16 19:19:02 -07:00
Alex Newman 4c2ab98d90 Merge pull request #1679 from ousamabenyounes/fix/issue-1297
fix: set cwd to homedir when spawning chroma-mcp to prevent pydantic .env.local crash (#1297)
2026-04-14 18:41:48 -07:00
Ousama Ben Younes c7c4fd54d6 fix: set cwd to homedir when spawning chroma-mcp to prevent pydantic .env.local crash (#1297)
chroma-mcp uses pydantic-settings which auto-reads .env/.env.local from
the CWD. When the project directory contains non-chroma variables (e.g.
CELERY_TASK_ALWAYS_EAGER), pydantic rejects them with "Extra inputs are
not permitted", crashing the subprocess and triggering a permanent
backoff loop. Passing cwd: os.homedir() to StdioClientTransport ensures
pydantic never reads project env files.

Generated by Claude Code
Vibe coded by ousamabenyounes

Co-Authored-By: Claude <noreply@anthropic.com>
2026-04-10 09:55:02 +00:00
Alex Newman 85f57e6440 Merge branch 'pr-1554' into integration/validation-batch 2026-04-06 14:18:28 -07:00
Alessandro Costa 64cce2bf10 fix: resolve 3 upstream bugs (summarize, ChromaSync, HealthMonitor) (#1566)
* fix: resolve 3 upstream bugs in summarize, ChromaSync, and HealthMonitor

1. summarize.ts: Skip summary when transcript has no assistant message.
   Prevents error loop where empty transcripts cause repeated failed
   summarize attempts (~30 errors/day observed in production).

2. ChromaSync.ts: Fallback to chroma_update_documents when add fails
   with "IDs already exist". Handles partial writes after MCP timeout
   without waiting for next backfill cycle.

3. HealthMonitor.ts: Replace HTTP-based isPortInUse with atomic socket
   bind on Unix. Eliminates TOCTOU race when two sessions start
   simultaneously (HTTP check is non-atomic — both see "port free"
   before either completes listen()). Updated tests accordingly.

All three bugs are pre-existing in v10.5.5. Confirmed via log analysis
of 543K lines over 17 days of production usage across two servers.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: add CONTRIB_NOTES.md to gitignore

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: address CodeRabbit review on PR #1566

- HealthMonitor: add APPROVED OVERRIDE annotation for Win32 HTTP fallback
- ChromaSync: replace chroma_update_documents with delete+add for proper
  upsert (update only modifies existing IDs, silently ignores missing ones)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Alessandro Costa <alessandro@claudio.dev>
Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-04-04 15:15:08 -07:00
Ousama Ben Younes 2a304d59eb fix: handle bare path strings in files_modified/files_read columns (#1359)
JSON.parse('/path/to/file') throws SyntaxError, crashing the viewer and
any code reading observations with legacy bare-path data in those columns.

- Add parseFileList() helper in observations/files.ts — tries JSON.parse,
  falls back to wrapping bare strings in an array
- Replace unsafe JSON.parse calls in files.ts, SessionStore.ts, ChromaSync.ts
- Add 9 unit tests covering null, empty, valid JSON, bare paths, invalid JSON

Closes #1359

Co-Authored-By: Claude <noreply@anthropic.com>
2026-04-01 06:17:35 +00:00
Alex Newman 80a8c90a1a feat: add embedded Process Supervisor for unified process lifecycle (#1370)
* feat: add embedded Process Supervisor for unified process lifecycle management

Consolidates scattered process management (ProcessManager, GracefulShutdown,
HealthMonitor, ProcessRegistry) into a unified src/supervisor/ module.

New: ProcessRegistry with JSON persistence, env sanitizer (strips CLAUDECODE_*
vars), graceful shutdown cascade (SIGTERM → 5s wait → SIGKILL with tree-kill
on Windows), PID file liveness validation, and singleton Supervisor API.

Fixes #1352 (worker inherits CLAUDECODE env causing nested sessions)
Fixes #1356 (zombie TCP socket after Windows reboot)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add session-scoped process reaping to supervisor

Adds reapSession(sessionId) to ProcessRegistry for killing session-tagged
processes on session end. SessionManager.deleteSession() now triggers reaping.
Tightens orphan reaper interval from 60s to 30s.

Fixes #1351 (MCP server processes leak on session end)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add Unix domain socket support for worker communication

Introduces socket-manager.ts for UDS-based worker communication, eliminating
port 37777 collisions between concurrent sessions. Worker listens on
~/.claude-mem/sockets/worker.sock by default with TCP fallback.

All hook handlers, MCP server, health checks, and admin commands updated to
use socket-aware workerHttpRequest(). Backwards compatible — settings can
force TCP mode via CLAUDE_MEM_WORKER_TRANSPORT=tcp.

Fixes #1346 (port 37777 collision across concurrent sessions)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: remove in-process worker fallback from hook command

Removes the fallback path where hook scripts started WorkerService in-process,
making the worker a grandchild of Claude Code (killed by sandbox). Hooks now
always delegate to ensureWorkerStarted() which spawns a fully detached daemon.

Fixes #1249 (grandchild process killed by sandbox)

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* feat: add health checker and /api/admin/doctor endpoint

Adds 30-second periodic health sweep that prunes dead processes from the
supervisor registry and cleans stale socket files. Adds /api/admin/doctor
endpoint exposing supervisor state, process liveness, and environment health.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* test: add comprehensive supervisor test suite

64 tests covering all supervisor modules: process registry (18 tests),
env sanitizer (8), shutdown cascade (10), socket manager (15), health
checker (5), and supervisor API (6). Includes persistence, isolation,
edge cases, and cross-module integration scenarios.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* fix: revert Unix domain socket transport, restore TCP on port 37777

The socket-manager introduced UDS as default transport, but this broke
the HTTP server's TCP accessibility (viewer UI, curl, external monitoring).
Since there's only ever one worker process handling all sessions, the
port collision rationale for UDS doesn't apply. Reverts to TCP-only,
removing ~900 lines of unnecessary complexity.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* chore: remove dead code found in pre-landing review

Remove unused `acceptingSpawns` field from Supervisor class (written but
never read — assertCanSpawn uses stopPromise instead) and unused
`buildWorkerUrl` import from context handler.

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

* updated gitignore

* fix: address PR review feedback - downgrade HTTP logging, clean up gitignore, harden supervisor

- Downgrade request/response HTTP logging from info to debug to reduce noise
- Remove unused getWorkerPort imports, use buildWorkerUrl helper
- Export ENV_PREFIXES/ENV_EXACT_MATCHES from env-sanitizer, reuse in Server.ts
- Fix isPidAlive(0) returning true (should be false)
- Add shutdownInitiated flag to prevent signal handler race condition
- Make validateWorkerPidFile testable with pidFilePath option
- Remove unused dataDir from ShutdownCascadeOptions
- Upgrade reapSession log from debug to warn
- Rename zombiePidFiles to deadProcessPids (returns actual PIDs)
- Clean up gitignore: remove duplicate datasets/, stale ~*/ and http*/ patterns
- Fix tests to use temp directories instead of relying on real PID file

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-16 14:49:23 -07:00
Vincent Leraitre 237a4c37f8 fix: always pass --ssl flag to chroma-mcp in remote mode (#1286)
* fix: always pass --ssl flag to chroma-mcp in remote mode

The chroma-mcp CLI defaults to SSL when using --client-type http.
When CLAUDE_MEM_CHROMA_SSL is false (the common case for local
ChromaDB servers), buildCommandArgs() omitted --ssl entirely,
causing chroma-mcp to attempt an SSL connection to a plain HTTP
server and fail with "Could not connect to a Chroma server".

Always pass --ssl with an explicit true/false value so the user's
CLAUDE_MEM_CHROMA_SSL setting is faithfully forwarded.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* test: add regression tests for ChromaMcpManager SSL flag fix

Adds 4 focused test cases verifying buildCommandArgs() produces correct
--ssl args, covering SSL=false, SSL=true, unset (defaults to false), and
local mode (no --ssl flag). Requested by @xkonjin in PR #1286 review.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: rebuild checked-in bundles to include SSL flag fix

Rebuild all bundles against upstream/main so the --ssl <true|false>
fix is present in the runtime artifacts that hooks and the marketplace
plugin actually execute.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-03-12 20:03:58 -07:00
Alex Newman c6f932988a Fix 30+ root-cause bugs across 10 triage phases (#1214)
* MAESTRO: fix ChromaDB core issues — Python pinning, Windows paths, disable toggle, metadata sanitization, transport errors

- Add --python version pinning to uvx args in both local and remote mode (fixes #1196, #1206, #1208)
- Convert backslash paths to forward slashes for --data-dir on Windows (fixes #1199)
- Add CLAUDE_MEM_CHROMA_ENABLED setting for SQLite-only fallback mode (fixes #707)
- Sanitize metadata in addDocuments() to filter null/undefined/empty values (fixes #1183, #1188)
- Wrap callTool() in try/catch for transport errors with auto-reconnect (fixes #1162)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix data integrity — content-hash deduplication, project name collision, empty project guard, stuck isProcessing

- Add SHA-256 content-hash deduplication to observations INSERT (store.ts, transactions.ts, SessionStore.ts)
- Add content_hash column via migration 22 with backfill and index
- Fix project name collision: getCurrentProjectName() now returns parent/basename
- Guard against empty project string with cwd-derived fallback
- Fix stuck isProcessing: hasAnyPendingWork() resets processing messages older than 5 minutes
- Add 12 new tests covering all four fixes

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix hook lifecycle — stderr suppression, output isolation, conversation pollution prevention

- Suppress process.stderr.write in hookCommand() to prevent Claude Code showing diagnostic
  output as error UI (#1181). Restores stderr in finally block for worker-continues case.
- Convert console.error() to logger.warn()/error() in hook-command.ts and handlers/index.ts
  so all diagnostics route to log file instead of stderr.
- Verified all 7 handlers return suppressOutput: true (prevents conversation pollution #598, #784).
- Verified session-complete is a recognized event type (fixes #984).
- Verified unknown event types return no-op handler with exit 0 (graceful degradation).
- Added 10 new tests in tests/hook-lifecycle.test.ts covering event dispatch, adapter defaults,
  stderr suppression, and standard response constants.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix worker lifecycle — restart loop coordination, stale transport retry, ENOENT shutdown race

- Add PID file mtime guard to prevent concurrent restart storms (#1145):
  isPidFileRecent() + touchPidFile() coordinate across sessions
- Add transparent retry in ChromaMcpManager.callTool() on transport
  error — reconnects and retries once instead of failing (#1131)
- Wrap getInstalledPluginVersion() with ENOENT/EBUSY handling (#1042)
- Verified ChromaMcpManager.stop() already called on all shutdown paths

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix Windows platform support — uvx.cmd spawn, PowerShell $_ elimination, windowsHide, FTS5 fallback

- Route uvx spawn through cmd.exe /c on Windows since MCP SDK lacks shell:true (#1190, #1192, #1199)
- Replace all PowerShell Where-Object {$_} pipelines with WQL -Filter server-side filtering (#1024, #1062)
- Add windowsHide: true to all exec/spawn calls missing it to prevent console popups (#1048)
- Add FTS5 runtime probe with graceful fallback when unavailable on Windows (#791)
- Guard FTS5 table creation in migrations, SessionSearch, and SessionStore with try/catch

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix skills/ distribution — build-time verification and regression tests (#1187)

Add post-build verification in build-hooks.js that fails if critical
distribution files (skills, hooks, plugin manifest) are missing. Add
10 regression tests covering skill file presence, YAML frontmatter,
hooks.json integrity, and package.json files field.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix MigrationRunner schema initialization (#979) — version conflict between parallel migration systems

Root cause: old DatabaseManager migrations 1-7 shared schema_versions table with
MigrationRunner's 4-22, causing version number collisions (5=drop tables vs add column,
6=FTS5 vs prompt tracking, 7=discovery_tokens vs remove UNIQUE).  initializeSchema()
was gated behind maxApplied===0, so core tables were never created when old versions
were present.

Fixes:
- initializeSchema() always creates core tables via CREATE TABLE IF NOT EXISTS
- Migrations 5-7 check actual DB state (columns/constraints) not just version tracking
- Crash-safe temp table rebuilds (DROP IF EXISTS _new before CREATE)
- Added missing migration 21 (ON UPDATE CASCADE) to MigrationRunner
- Added ON UPDATE CASCADE to FK definitions in initializeSchema()
- All changes applied to both runner.ts and SessionStore.ts

Tests: 13 new tests in migration-runner.test.ts covering fresh DB, idempotency,
version conflicts, crash recovery, FK constraints, and data integrity.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix 21 test failures — stale mocks, outdated assertions, missing OpenClaw guards

Server tests (12): Added missing workerPath and getAiStatus to ServerOptions
mocks after interface expansion. ChromaSync tests (3): Updated to verify
transport cleanup in ChromaMcpManager after architecture refactor. OpenClaw (2):
Added memory_ tool skipping and response truncation to prevent recursive loops
and oversized payloads. MarkdownFormatter (2): Updated assertions to match
current output. SettingsDefaultsManager (1): Used correct default key for
getBool test. Logger standards (1): Excluded CLI transcript command from
background service check.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix Codex CLI compatibility (#744) — session_id fallbacks, unknown platform tolerance, undefined guard

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix Cursor IDE integration (#838, #1049) — adapter field fallbacks, tolerant session-init validation

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix /api/logs OOM (#1203) — tail-read replaces full-file readFileSync

Replace readFileSync (loads entire file into memory) with readLastLines()
that reads only from the end of the file in expanding chunks (64KB → 10MB cap).
Prevents OOM on large log files while preserving the same API response shape.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix Settings CORS error (#1029) — explicit methods and allowedHeaders in CORS config

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: add session custom_title for agent attribution (#1213) — migration 23, endpoint + store support

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: prevent CLAUDE.md/AGENTS.md writes inside .git/ directories (#1165)

Add .git path guard to all 4 write sites to prevent ref corruption when
paths resolve inside .git internals.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix plugin disabled state not respected (#781) — early exit check in all hook entry points

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix UserPromptSubmit context re-injection on every turn (#1079) — contextInjected session flag

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* MAESTRO: fix stale AbortController queue stall (#1099) — lastGeneratorActivity tracking + 30s timeout

Three-layer fix:
1. Added lastGeneratorActivity timestamp to ActiveSession, updated by
   processAgentResponse (all agents), getMessageIterator (queue yields),
   and startGeneratorWithProvider (generator launch)
2. Added stale generator detection in ensureGeneratorRunning — if no
   activity for >30s, aborts stale controller, resets state, restarts
3. Added AbortSignal.timeout(30000) in deleteSession to prevent
   indefinite hang when awaiting a stuck generator promise

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-23 19:34:35 -05:00
Alex Newman 40daf8f3fa feat: replace WASM embeddings with persistent chroma-mcp MCP connection (#1176)
* feat: replace WASM embeddings with persistent chroma-mcp MCP connection

Replace ChromaServerManager (npx chroma run + chromadb npm + ONNX/WASM)
with ChromaMcpManager, a singleton stdio MCP client that communicates with
chroma-mcp via uvx. This eliminates native binary issues, segfaults, and
WASM embedding failures that plagued cross-platform installs.

Key changes:
- Add ChromaMcpManager: singleton MCP client with lazy connect, auto-reconnect,
  connection lock, and Zscaler SSL cert support
- Rewrite ChromaSync to use MCP tool calls instead of chromadb npm client
- Handle chroma-mcp's non-JSON responses (plain text success/error messages)
- Treat "collection already exists" as idempotent success
- Wire ChromaMcpManager into GracefulShutdown for clean subprocess teardown
- Delete ChromaServerManager (no longer needed)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: address PR review — connection guard leak, timer leak, async reset

- Clear connecting guard in finally block to prevent permanent reconnection block
- Clear timeout after successful connection to prevent timer leak
- Make reset() async to await stop() before nullifying instance
- Delete obsolete chroma-server-manager test (imports deleted class)
- Update graceful-shutdown test to use chromaMcpManager property name

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: prevent chroma-mcp spawn storm — zombie cleanup, stale onclose guard, reconnect backoff

Three bugs caused chroma-mcp processes to accumulate (92+ observed):

1. Zombie on timeout: failed connections left subprocess alive because
   only the timer was cleared, not the transport. Now catch block
   explicitly closes transport+client before rethrowing.

2. Stale onclose race: old transport's onclose handler captured `this`
   and overwrote the current connection reference after reconnect,
   orphaning the new subprocess. Now guarded with reference check.

3. No backoff: every failure triggered immediate reconnect. With
   backfill doing hundreds of MCP calls, this created rapid-fire
   spawning. Added 10s backoff on both connection failure and
   unexpected process death.

Also includes ChromaSync fixes from PR review:
- queryChroma deduplication now preserves index-aligned arrays
- SQL injection guard on backfill ID exclusion lists

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-18 18:32:38 -05:00
Alex Newman ca8421611c fix: backfill Chroma vector DB for all projects on startup (#1154)
* fix: backfill all Chroma projects on worker startup

ChromaSync.ensureBackfilled() existed but was never called. After
v10.2.2's bun cache clear destroyed the ONNX model cache, Chroma only
had ~2 days of embeddings while SQLite had 49k+ observations.

- Add static backfillAllProjects() to ChromaSync — iterates all projects
  in SQLite, creates temporary ChromaSync per project, runs smart diff
- Call backfillAllProjects() fire-and-forget on worker startup
- Add 'CHROMA_SYNC' to logger Component type (pre-existing gap)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: sanitize project names for Chroma collection naming

Replace characters outside [a-zA-Z0-9._-] with underscores so projects
like "YC Stuff" map to collection "cm__YC_Stuff" instead of failing
Chroma's collection name validation.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* fix: route backfill to shared cm__claude-mem collection, harden sanitization

- Use single ChromaSync('claude-mem') in backfillAllProjects() instead of
  per-project instances, matching how DatabaseManager and SearchManager
  operate — fixes critical bug where backfilled data landed in orphaned
  collections that no search path reads from
- Strip trailing non-alphanumeric chars from sanitized collection names
  to satisfy Chroma's end-character constraint
- Guard backfill behind Chroma server readiness to avoid N spurious error
  logs when Chroma failed to start
- Use CHROMA_SYNC log component consistently for backfill messages

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

* refactor: pass project as parameter to ensureBackfilled instead of mutating instance state

Eliminates shared mutable state in backfillAllProjects() loop. Project
scoping is now passed explicitly via parameter to both ensureBackfilled()
and getExistingChromaIds(), keeping a single Chroma connection while
avoiding fragile instance property mutation across iterations.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-17 22:47:46 -05:00
Alex Newman 224567f980 fix: prevent ONNX model cache corruption from bun cache clears
Remove nuclear `bun pm cache rm` from smart-install.js and
sync-marketplace.cjs (only needed for removed sharp dependency).
Add `bun install` in cache version directory after sync so worker
can resolve dependencies. Move HuggingFace model cache to
~/.claude-mem/models/ so reinstalls don't corrupt it. Add self-healing
retry for Protobuf parsing failures.

Fixes recurring issues #1104, #1105, #1110.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-16 19:54:17 -05:00
Alex Newman 055888e181 fix: address PR review feedback for subprocess cleanup and binary resolution
Wrap SDK query loop in try/finally so subprocess cleanup runs on error paths.
Swap Chroma binary check order to try project-level .bin first (common case).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-15 23:24:00 -05:00
Alex Newman 67ba17cc8a fix: use WASM backend for Chroma embeddings to fix cross-platform issues
Chroma requires client-side embeddings — the server is storage only.
The previous commit incorrectly removed @chroma-core/default-embed.

Uses DefaultEmbeddingFunction({ wasm: true }) which forces the WASM
backend instead of native ONNX binaries. Same model (all-MiniLM-L6-v2),
same embeddings, but works on all platforms without segfaults or
ENOENT errors (#1104, #1105, #1110).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-15 23:14:21 -05:00
Alex Newman e1ef14dbcc fix: resolve orphaned subprocesses and Chroma HTTP regressions
- Add subprocess cleanup after SDK query loop completes, using existing
  ProcessRegistry infrastructure (getProcessBySession + ensureProcessExit)
- Replace npx-based Chroma binary spawning with absolute path resolution
  via require.resolve, falling back to npx with explicit cwd (#1120)
- Remove @chroma-core/default-embed client-side dependency; let Chroma
  HTTP server handle embeddings server-side (#1104, #1105, #1110)

Closes #1010, #1089, #1090, #1068, #1120, #1104, #1105, #1110

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-15 22:04:52 -05:00
Alex Newman c27314f896 fix: address PR review comments for chroma server lifecycle 2026-02-13 23:39:30 -05:00
Alex Newman 1b68c55763 fix: resolve SDK spawn failures and sharp native binary crashes
- Strip CLAUDECODE env var from SDK subprocesses to prevent "cannot be
  launched inside another Claude Code session" error (Claude Code 2.1.42+)
- Lazy-load @chroma-core/default-embed to avoid eagerly pulling in
  sharp native binaries at bundle startup (fixes ERR_DLOPEN_FAILED)
- Add stderr capture to SDK spawn for diagnosing future process failures
- Exclude lockfiles from marketplace rsync and delete stale lockfiles
  before npm install to prevent native dep version mismatches

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-13 22:47:27 -05:00
Alex Newman ed313db742 Merge main into feat/chroma-http-server
Resolve conflicts between Chroma HTTP server PR and main branch changes
(folder CLAUDE.md, exclusion settings, Zscaler SSL, transport cleanup).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-13 21:02:54 -05:00
Alex Newman 98d87d7573 chore: bump version to 10.0.4
Reverts v10.0.3 chroma-mcp spawn storm fix (broken release).
Restores codebase to v10.0.2 state.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-11 21:36:34 -05:00
Rod Boev 2c5c99c0c7 fix: use etime-based sorting instead of PID ordering for process guards
Addresses Greptile review feedback:
- ChromaSync: replace PID-based sort with ps etime column + parseElapsedTime()
  for reliable age ordering (PIDs wrap and don't guarantee ordering)
- ProcessManager: filter out entries with unparseable etime (-1) before
  sorting to prevent sort corruption in cleanupExcessChromaProcesses()
2026-02-11 07:19:28 -05:00
Rod Boev a3f9e7f638 fix: prevent chroma-mcp spawn storm with 5-layer defense (641 processes → max 2)
During SIGHUP testing with 6+ active sessions, ChromaSync.ensureConnection()
had no mutex — concurrent fire-and-forget syncObservation() calls each spawned
a chroma-mcp subprocess via StdioClientTransport, creating 641 orphans in ~5min.
Error-driven reconnection formed a positive feedback loop amplifying the storm.

Defense layers:
- Layer 0: Connection mutex via promise memoization (prevents concurrent spawns)
- Layer 1: Pre-spawn process count guard using execFileSync('ps') (kills excess)
- Layer 2: Hardened close() with try-finally + Unix pkill in GracefulShutdown
- Layer 3: Count-based orphan reaper in ProcessManager (not age-based)
- Layer 4: Circuit breaker stops retries after 3 consecutive failures for 60s

Closes #1063, closes #695
Relates to #1010, #707
2026-02-11 07:19:28 -05:00
xingyu e4e1d3fb92 fix: Windows platform improvements — re-enable Chroma, fix DB race, simplify env isolation
1. ProcessManager: Migrate spawnDaemon() from WMIC to PowerShell Start-Process
   - WMIC deprecated in Windows 11, PowerShell inherits env vars properly
   - Use -WindowStyle Hidden to prevent console popups
   - Fix redundant backslash escaping in PowerShell $_ variables

2. ChromaSync: Re-enable vector search on Windows
   - Remove overly defensive platform check that disabled all semantic search
   - Worker daemon starts with -WindowStyle Hidden; child processes inherit
   - MCP SDK's StdioClientTransport uses shell:false, no new console created

3. worker-service: Unified DB-ready gate middleware
   - Replace single-endpoint /api/sessions/init wait with global middleware
   - Hold all DB-dependent requests until database is initialized (30s timeout)
   - Whitelist static assets, /health, and viewer page for immediate response
   - Separate dbReadyPromise (DB only) from initializationComplete (full init)
   - Fixes "Database not initialized" errors on /stream, /summarize, /init

4. EnvManager: Switch from allowlist to blocklist for subprocess env
   - Only strip ANTHROPIC_API_KEY to prevent Issue #733 billing hijack
   - Pass through all other vars (ANTHROPIC_AUTH_TOKEN, ANTHROPIC_BASE_URL, etc.)
   - Simpler, less fragile than maintaining an exhaustive system vars allowlist
2026-02-07 18:30:57 +08:00
Alex Newman 3ad53733e8 MAESTRO: Merge PR #884 adding Zscaler SSL certificate support for ChromaDB vector search
Adds automatic detection and handling of Zscaler enterprise security certificates
on macOS. Combines standard certifi CA certificates with Zscaler certificates into
a single bundle, passed via SSL_CERT_FILE/REQUESTS_CA_BUNDLE/CURL_CA_BUNDLE env vars
to the chroma-mcp subprocess. Certificate bundle is cached for 24 hours. Falls back
gracefully when Zscaler is not present, with no impact on non-Zscaler environments.

Co-Authored-By: RClark4958 <rickdclark48@gmail.com>
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-06 02:15:19 -05:00
Jenha Poyarkov 9f2a237aaf fix: close transport on connection error to prevent chroma-mcp zombie processes
Fixes #761

Root cause: When connection errors occur (MCP error -32000, Connection closed),
the code was resetting \`connected\` and \`client\` but NOT calling
\`transport.close()\`, leaving the chroma-mcp subprocess alive. Each
reconnection attempt spawned a NEW process while old ones accumulated.

Changes:
- Close transport before resetting state in ensureCollection() error handler
- Close transport before resetting state in queryChroma() error handler
- Set transport = null after closing to match close() method behavior
- Add regression tests for Issue #761 with source code verification

Tested on macOS - no more zombie processes after the fix.
2026-02-06 02:10:18 -05:00
Alex Newman 4df9f61347 refactor: implement in-process worker architecture for hooks (#722)
* fix: stop generating empty CLAUDE.md files

- Return empty string instead of "No recent activity" when no observations exist
- Skip writing CLAUDE.md files when formatted content is empty
- Remove redundant "auto-generated by claude-mem" HTML comment
- Clean up 98 existing empty CLAUDE.md files across the codebase
- Update tests to expect empty string for empty input

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build assets

* refactor: implement in-process worker architecture for hooks

Replaces spawn-based worker startup with in-process architecture:
- Hook processes now become the worker when port 37777 is free
- Eliminates Windows spawn issues (NO SPAWN rule)
- SessionStart chains: smart-install && stop && context

Key changes:
- worker-service.ts: hook case starts WorkerService in-process
- hook-command.ts: skipExit option prevents process.exit() when hosting worker
- hooks.json: single chained command replaces separate start/hook commands
- worker-utils.ts: ensureWorkerRunning() returns boolean, doesn't block
- handlers: graceful fallback when worker unavailable

All 761 tests pass. Manual verification confirms hook stays alive as worker.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* context

* a

* MAESTRO: Mark PR #722 test verification task complete

All 797 tests passed (3 skipped, 0 failed) after merge conflict resolution.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* MAESTRO: Mark PR #722 build verification task complete

* MAESTRO: Mark PR #722 code review task complete

Code review verified:
- worker-service.ts hook case starts WorkerService in-process
- hook-command.ts has skipExit option
- hooks.json uses single chained command
- worker-utils.ts ensureWorkerRunning() returns boolean

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* MAESTRO: Mark PR #722 conflict resolution push task complete

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-02-04 19:49:15 -05:00
bigphoot 2a83e530e9 feat: Add multi-tenancy support for claude-mem pro
Wire tenant, database, and API key settings into ChromaSync for
remote/pro mode. In remote mode:
- Passes tenant and database to ChromaClient for data isolation
- Adds Authorization header when API key is configured
- Logs tenant isolation connection details

Local mode unchanged - uses default_tenant without explicit params.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-26 13:02:04 -08:00
bigphoot e5d763860c fix: Remove duplicate else block from merge
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-26 13:02:04 -08:00
Alexander Knigge 9e4b401f9b Update src/services/sync/ChromaServerManager.ts
Co-authored-by: greptile-apps[bot] <165735046+greptile-apps[bot]@users.noreply.github.com>
2026-01-26 13:02:04 -08:00
bigphoot 2c304eafad feat: Add DefaultEmbeddingFunction for local vector embeddings
- Added @chroma-core/default-embed dependency for local embeddings
- Updated ChromaSync to use DefaultEmbeddingFunction with collections
- Added isServerReachable() async method for reliable server detection
- Fixed start() to detect and reuse existing Chroma servers
- Updated build script to externalize native ONNX binaries
- Added runtime dependency to plugin/package.json

The embedding function uses all-MiniLM-L6-v2 model locally via ONNX,
eliminating need for external embedding API calls.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-26 13:02:04 -08:00
bigphoot 70d6ac9daf fix: Use chromadb v3.2.2 with v2 API heartbeat endpoint
- Updated chromadb from ^1.9.2 to ^3.2.2 (includes CLI binary)
- Changed heartbeat endpoint from /api/v1 to /api/v2

The 1.9.x version did not include the CLI, causing `npx chroma run` to fail.
Version 3.2.2 includes the chroma CLI and uses the v2 API.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-26 13:02:04 -08:00
bigphoot 5b3804ac08 feat: Switch to persistent Chroma HTTP server
Replace MCP subprocess approach with persistent Chroma HTTP server for
improved performance and reliability. This re-enables Chroma on Windows
by eliminating the subprocess spawning that caused console popups.

Changes:
- NEW: ChromaServerManager.ts - Manages local Chroma server lifecycle
  via `npx chroma run`
- REFACTOR: ChromaSync.ts - Uses chromadb npm package's ChromaClient
  instead of MCP subprocess (removes Windows disabling)
- UPDATE: worker-service.ts - Starts Chroma server on initialization
- UPDATE: GracefulShutdown.ts - Stops Chroma server on shutdown
- UPDATE: SettingsDefaultsManager.ts - New Chroma configuration options
- UPDATE: build-hooks.js - Mark optional chromadb deps as external

Benefits:
- Eliminates subprocess spawn latency on first query
- Single server process instead of per-operation subprocesses
- No Python/uvx dependency for local mode
- Re-enables Chroma vector search on Windows
- Future-ready for cloud-hosted Chroma (claude-mem pro)
- Cross-platform: Linux, macOS, Windows

Configuration:
  CLAUDE_MEM_CHROMA_MODE=local|remote
  CLAUDE_MEM_CHROMA_HOST=127.0.0.1
  CLAUDE_MEM_CHROMA_PORT=8000
  CLAUDE_MEM_CHROMA_SSL=false

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-26 13:02:04 -08:00
Alexander Knigge e6ae017609 fix: eliminate Windows console popups during daemon spawn and Chroma operations (#751)
* fix: eliminate Windows console popups during daemon spawn and Chroma operations

Two changes to fix Windows Terminal popup issues:

1. Worker daemon spawn (ProcessManager.spawnDaemon):
   - Windows: Use WMIC to spawn truly independent process without console
   - WMIC creates processes that survive parent exit and have no console association
   - Properly handles paths with spaces via double-quoting
   - Unix: Unchanged behavior with standard detached spawn

2. PID file handling (worker-service.ts):
   - Worker now writes its own PID after listen() succeeds (all platforms)
   - Removes race condition where spawner wrote PID before worker was ready
   - On Windows, spawner PID was useless anyway

3. Chroma vector search (ChromaSync.ts):
   - Temporarily disabled on Windows to prevent MCP SDK subprocess popups
   - Will be re-enabled when we migrate to persistent HTTP server architecture
   - Windows users still get full observation storage, just no semantic search

Tested on Windows 11 via SSH - worker spawns without console popups,
survives parent process exit, and all lifecycle commands (start/stop/restart)
work correctly.

Fixes #748, #708, #681, #676, #675

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: add YAML frontmatter to slash commands for discoverability

Commands /do and /make-plan were not appearing in Claude Code because
they lacked the required YAML frontmatter metadata. Added description
and argument-hint fields to both commands.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

---------

Co-authored-by: bigphoot <bigphoot@gmail.com>
Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-22 18:46:23 -05:00
Alex Newman 05323c9db5 Cleanup worker-service.ts: remove dead code and fallback concept (#706)
* refactor(worker): remove dead code from worker-service.ts

Remove ~216 lines of unreachable code:
- Delete `runInteractiveSetup` function (defined but never called)
- Remove unused imports: fs namespace, spawn, homedir, readline,
  existsSync/writeFileSync/readFileSync/mkdirSync
- Clean up CursorHooksInstaller imports (keep only used exports)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix(worker): only enable SDK fallback when Claude is configured

Add isConfigured() method to SDKAgent that checks for ANTHROPIC_API_KEY
or claude CLI availability. Worker now only sets SDK agent as fallback
for third-party providers when credentials exist, preventing cascading
failures for users who intentionally use Gemini/OpenRouter without Claude.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor(worker): remove misleading re-export indirection

Remove unnecessary re-export of updateCursorContextForProject from
worker-service.ts. ResponseProcessor now imports directly from
CursorHooksInstaller.ts where the function is defined. This eliminates
misleading indirection that suggested a circular dependency existed.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor(mcp): use build-time injected version instead of hardcoded strings

Replace hardcoded '1.0.0' version strings with __DEFAULT_PACKAGE_VERSION__
constant that esbuild replaces at build time. This ensures MCP server and
client versions stay synchronized with package.json.

- worker-service.ts: MCP client version now uses packageVersion
- ChromaSync.ts: MCP client version now uses packageVersion
- mcp-server.ts: MCP server version now uses packageVersion
- Added clarifying comments for empty MCP capabilities objects

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: Implement cleanup and validation plans for worker-service.ts

- Added a comprehensive cleanup plan addressing 23 identified issues in worker-service.ts, focusing on safe deletions, low-risk simplifications, and medium-risk improvements.
- Created an execution plan for validating intentional patterns in worker-service.ts, detailing necessary actions and priorities.
- Generated a report on unjustified logic in worker-service.ts, categorizing issues by severity and providing recommendations for immediate and short-term actions.
- Introduced documentation for recent activity in the mem-search plugin, enhancing traceability and context for changes.

* fix(sdk): remove dangerous ANTHROPIC_API_KEY check from isConfigured

Claude Code uses CLI authentication, not direct API calls. Checking for
ANTHROPIC_API_KEY could accidentally use a user's API key (from other
projects) which costs 20x more than Claude Code's pricing.

Now only checks for claude CLI availability.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix(worker): remove fallback agent concept entirely

Users who choose Gemini/OpenRouter want those providers, not secret
fallback behavior. Removed setFallbackAgent calls and the unused
isConfigured() method.

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-13 23:30:13 -05:00
Alex Newman 2659ec3231 fix: Claude Code 2.1.1 compatibility + log-level audit + path validation fixes (#614)
* Refactor CLAUDE.md and related files for December 2025 updates

- Updated CLAUDE.md in src/services/worker with new entries for December 2025, including changes to Search.ts, GeminiAgent.ts, SDKAgent.ts, and SessionManager.ts.
- Revised CLAUDE.md in src/shared to reflect updates and new entries for December 2025, including paths.ts and worker-utils.ts.
- Modified hook-constants.ts to clarify exit codes and their behaviors.
- Added comprehensive hooks reference documentation for Claude Code, detailing usage, events, and examples.
- Created initial CLAUDE.md files in various directories to track recent activity.

* fix: Merge user-message-hook output into context-hook hookSpecificOutput

- Add footer message to additionalContext in context-hook.ts
- Remove user-message-hook from SessionStart hooks array
- Fixes issue where stderr+exit(1) approach was silently discarded

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Update logs and documentation for recent plugin and worker service changes

- Added detailed logs for worker service activities from Dec 10, 2025 to Jan 7, 2026, including initialization patterns, cleanup confirmations, and diagnostic logging.
- Updated plugin documentation with recent activities, including plugin synchronization and configuration changes from Dec 3, 2025 to Jan 7, 2026.
- Enhanced the context hook and worker service logs to reflect improvements and fixes in the plugin architecture.
- Documented the migration and verification processes for the Claude memory system and its integration with the marketplace.

* Refactor hooks architecture and remove deprecated user-message-hook

- Updated hook configurations in CLAUDE.md and hooks.json to reflect changes in session start behavior.
- Removed user-message-hook functionality as it is no longer utilized in Claude Code 2.1.0; context is now injected silently.
- Enhanced context-hook to handle session context injection without user-visible messages.
- Cleaned up documentation across multiple files to align with the new hook structure and removed references to obsolete hooks.
- Adjusted timing and command execution for hooks to improve performance and reliability.

* fix: Address PR #610 review issues

- Replace USER_MESSAGE_ONLY test with BLOCKING_ERROR test in hook-constants.test.ts
- Standardize Claude Code 2.1.0 note wording across all three documentation files
- Exclude deprecated user-message-hook.ts from logger-usage-standards test

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: Remove hardcoded fake token counts from context injection

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Address PR #610 review issues by fixing test files, standardizing documentation notes, and verifying code quality improvements.

* fix: Add path validation to CLAUDE.md distribution to prevent invalid directory creation

- Add isValidPathForClaudeMd() function to reject invalid paths:
  - Tilde paths (~) that Node.js doesn't expand
  - URLs (http://, https://)
  - Paths with spaces (likely command text or PR references)
  - Paths with # (GitHub issue/PR references)
  - Relative paths that escape project boundary

- Integrate validation in updateFolderClaudeMdFiles loop
- Add 6 unit tests for path validation
- Update .gitignore to prevent accidental commit of malformed directories
- Clean up existing invalid directories (~/, PR #610..., git diff..., https:)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix: Implement path validation in CLAUDE.md generation to prevent invalid directory creation

- Added `isValidPathForClaudeMd()` function to validate file paths in `src/utils/claude-md-utils.ts`.
- Integrated path validation in `updateFolderClaudeMdFiles` to skip invalid paths.
- Added 6 new unit tests in `tests/utils/claude-md-utils.test.ts` to cover various rejection cases.
- Updated `.gitignore` to prevent tracking of invalid directories.
- Cleaned up existing invalid directories in the repository.

* feat: Promote critical WARN logs to ERROR level across codebase

Comprehensive log-level audit promoting 38+ WARN messages to ERROR for
improved debugging and incident response:

- Parser: observation type errors, data contamination
- SDK/Agents: empty init responses (Gemini, OpenRouter)
- Worker/Queue: session recovery, auto-recovery failures
- Chroma: sync failures, search failures (now treated as critical)
- SQLite: search failures (primary data store)
- Session/Generator: failures, missing context
- Infrastructure: shutdown, process management failures
- File Operations: CLAUDE.md updates, config reads
- Branch Management: recovery checkout failures

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix: Address PR #614 review issues

- Remove incorrectly tracked tilde-prefixed files from git
- Fix absolute path validation to check projectRoot boundaries
- Add test coverage for absolute path validation edge cases

Closes review issues:
- Issue 1: ~/ prefixed files removed from tracking
- Issue 3: Absolute paths now validated against projectRoot
- Issue 4: Added 3 new test cases for absolute path scenarios

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build assets and context

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 23:34:20 -05:00
Alex Newman a3d6bfc7dd feat: Update CLAUDE.md files with recent test activities and improvements
- Added detailed entries for test activities across various modules including `export-types.test.ts`, `server.test.ts`, `smart-install.test.ts`, and others.
- Documented significant changes in test coverage, cleanup efforts, and regression tests.
- Enhanced the `plans` documentation with recent implementation strategies and PR follow-ups.
- Introduced a comprehensive report on Windows platform challenges and solutions, detailing issues like zombie ports, console popups, and process management.
- Established a new `ProcessManager` architecture to address Windows-specific issues and improve reliability.
- Updated integration tests to reflect recent changes and ensure comprehensive coverage.
2026-01-07 16:53:02 -05:00
Alex Newman e1ab73decc feat: Live Context System with Distributed CLAUDE.md Generation (#556)
* docs: add folder index generator plan

RFC for auto-generating folder-level CLAUDE.md files with observation
timelines. Includes IDE symlink support and root CLAUDE.md integration.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: implement folder index generator (Phase 1)

Add automatic CLAUDE.md generation for folders containing observed files.
This enables IDE context providers to access relevant memory observations.

Core modules:
- FolderDiscovery: Extract folders from observation file paths
- FolderTimelineCompiler: Compile chronological timeline per folder
- ClaudeMdGenerator: Write CLAUDE.md with tag-based content replacement
- FolderIndexOrchestrator: Coordinate regeneration on observation save

Integration:
- Event-driven regeneration after observation save in ResponseProcessor
- HTTP endpoints for folder discovery, timeline, and manual generation
- Settings for enabling/configuring folder index behavior

The <claude-mem-context> tag wrapping ensures:
- Manual CLAUDE.md content is preserved
- Auto-generated content won't be recursively observed
- Clean separation between user and system content

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add updateFolderClaudeMd function to CursorHooksInstaller

Adds function to update CLAUDE.md files for folders touched by observations.
Uses existing /api/search/by-file endpoint, preserves content outside
<claude-mem-context> tags, and writes atomically via temp file + rename.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: hook updateFolderClaudeMd into ResponseProcessor

Calls updateFolderClaudeMd after observation save to update folder-level
CLAUDE.md files. Uses fire-and-forget pattern with error logging.
Extracts file paths from saved observations and workspace path from registry.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add timeline formatting for folder CLAUDE.md files

Implements formatTimelineForClaudeMd function that transforms API response
into compact markdown table format. Converts emojis to text labels,
handles ditto marks for timestamps, and groups under "Recent" header.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor: remove old folder-index implementation

Deletes redundant folder-index services that were replaced by the simpler
updateFolderClaudeMd approach in CursorHooksInstaller.ts.

Removed:
- src/services/folder-index/ directory (5 files)
- FolderIndexRoutes.ts
- folder-index settings from SettingsDefaultsManager
- folder-index route registration from worker-service

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add worktree-aware project filtering for unified timelines

Detect git worktrees and show both parent repo and worktree observations
in the session start timeline. When running in a worktree, the context
now includes observations from both projects, interleaved chronologically.

- Add detectWorktree() utility to identify worktree directories
- Add getProjectContext() to return parent + worktree projects
- Update context hook to pass multi-project queries
- Add queryObservationsMulti() and querySummariesMulti() for IN clauses
- Maintain backward compatibility with single-project queries

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com>

* fix: restructure logging to prove session correctness and reduce noise

Add critical logging at each stage of the session lifecycle to prove the session ID chain (contentSessionId → sessionDbId → memorySessionId) stays aligned. New logs include CREATED, ENQUEUED, CLAIMED, MEMORY_ID_CAPTURED, STORING, and STORED. Move intermediate migration and backfill progress logs to DEBUG level to reduce noise, keeping only essential initialization and completion logs at INFO level.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com>

* refactor: extract folder CLAUDE.md utils to shared location

Moves folder CLAUDE.md utilities from CursorHooksInstaller to a new
shared utils file. Removes Cursor registry dependency - file paths
from observations are already absolute, no workspace lookup needed.

New file: src/utils/claude-md-utils.ts
- replaceTaggedContent() - preserves user content outside tags
- writeClaudeMdToFolder() - atomic writes with tag preservation
- formatTimelineForClaudeMd() - API response to compact markdown
- updateFolderClaudeMdFiles() - orchestrates folder updates

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: trigger folder CLAUDE.md updates when observations are saved

The folder CLAUDE.md update was previously only triggered in
syncAndBroadcastSummary, but summaries run with observationCount=0
(observations are saved separately). Moved the update logic to
syncAndBroadcastObservations where file paths are available.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* all the claudes

* test: add unit tests for claude-md-utils pure functions

Add 11 tests covering replaceTaggedContent and formatTimelineForClaudeMd:
- replaceTaggedContent: empty content, tag replacement, appending, partial tags
- formatTimelineForClaudeMd: empty input, parsing, ditto marks, session IDs

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* test: add integration tests for file operation functions

Add 9 tests for writeClaudeMdToFolder and updateFolderClaudeMdFiles:
- writeClaudeMdToFolder: folder creation, content preservation, nested dirs, atomic writes
- updateFolderClaudeMdFiles: empty skip, fetch/write, deduplication, error handling

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* test: add unit tests for timeline-formatting utilities

Add 14 tests for extractFirstFile and groupByDate functions:
- extractFirstFile: relative paths, fallback to files_read, null handling, invalid JSON
- groupByDate: empty arrays, date grouping, chronological sorting, item preservation

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* chore: rebuild plugin scripts with merged features

* docs: add project-specific CLAUDE.md with architecture and development notes

* fix: exclude project root from auto-generated CLAUDE.md updates

Skip folders containing .git directory when auto-updating subfolder
CLAUDE.md files. This ensures:

1. Root CLAUDE.md remains user-managed and untouched by the system
2. SessionStart context injection stays pristine throughout the session
3. Subfolder CLAUDE.md files continue to receive live context updates
4. Cleaner separation between user-authored root docs and auto-generated folder indexes

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: prevent crash from resuming stale SDK sessions on worker restart

When the worker restarts, it was incorrectly passing the `resume` parameter
to INIT prompts (lastPromptNumber=1) when a memorySessionId existed from a
previous SDK session. This caused "Claude Code process exited with code 1"
crashes because the SDK tried to resume into a session that no longer exists.

Root cause: The resume condition only checked `hasRealMemorySessionId` but
did not verify that this was a CONTINUATION prompt (lastPromptNumber > 1).

Fix: Add `session.lastPromptNumber > 1` check to the resume condition:
- Before: `...(hasRealMemorySessionId && { resume: session.memorySessionId })`
- After: `...(hasRealMemorySessionId && session.lastPromptNumber > 1 && { resume: ... })`

Also added:
- Enhanced debug logging that warns when skipping resume for INIT prompts
- Unit tests in tests/sdk-agent-resume.test.ts (9 test cases)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: properly handle Chroma MCP connection errors

Previously, ensureCollection() caught ALL errors from chroma_get_collection_info
and assumed they meant "collection doesn't exist", triggering unnecessary
collection creation attempts. Connection errors like "Not connected" or
"MCP error -32000: Connection closed" would cascade into failed creation attempts.

Similarly, queryChroma() would silently return empty results when the MCP call
failed, masking the underlying connection problem.

Changes:
- ensureCollection(): Detect connection errors and re-throw immediately instead
  of attempting collection creation
- queryChroma(): Wrap MCP call in try-catch and throw connection errors instead
  of returning empty results
- Both methods reset connection state (connected=false, client=null) on
  connection errors so subsequent operations can attempt to reconnect

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* pushed

* fix: scope regenerate-claude-md.ts to current working directory

Critical bug fix: The script was querying ALL observations from the database
across ALL projects ever recorded (1396+ folders), then attempting to write
CLAUDE.md files everywhere including other projects, non-existent paths, and
ignored directories.

Changes:
- Use git ls-files to discover folders (respects .gitignore automatically)
- Filter database query to current project only (by folder name)
- Use relative paths for database queries (matches storage format)
- Add --clean flag to remove auto-generated CLAUDE.md files
- Add fallback directory walker for non-git repos

Now correctly scopes to 26 folders with observations instead of 1396+.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* docs and adjustments

* fix: cleanup mode strips tags instead of deleting files blindly

The cleanup mode was incorrectly deleting entire files that contained
<claude-mem-context> tags. The correct behavior (per original design):

1. Strip the <claude-mem-context>...</claude-mem-context> section
2. If empty after stripping → delete the file
3. If has remaining content → save the stripped version

Now properly preserves user content in CLAUDE.md files while removing
only the auto-generated sections.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* deleted some files

* chore: regenerate folder CLAUDE.md files with fixed script

Regenerated 23 folder CLAUDE.md files using the corrected script that:
- Scopes to current working directory only
- Uses git ls-files to respect .gitignore
- Filters by project name

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Update CLAUDE.md files for January 5, 2026

- Regenerated and staged 23 CLAUDE.md files with a mix of new and modified content.
- Fixed cleanup mode to properly strip tags instead of deleting files blindly.
- Cleaned up empty CLAUDE.md files from various directories, including ~/.claude and ~/Scripts.
- Conducted dry-run cleanup that identified a significant reduction in auto-generated CLAUDE.md files.
- Removed the isAutoGeneratedClaudeMd function due to incorrect file deletion behavior.

* feat: use settings for observation limit in batch regeneration script

Replace hard-coded limit of 10 with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS
setting (default: 50). This allows users to control how many observations appear
in folder CLAUDE.md files.

Changes:
- Import SettingsDefaultsManager and load settings at script startup
- Use OBSERVATION_LIMIT constant derived from settings at both call sites
- Remove stale default parameter from findObservationsByFolder function

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: use settings for observation limit in event-driven updates

Replace hard-coded limit of 10 in updateFolderClaudeMdFiles with
configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50).

Changes:
- Import SettingsDefaultsManager and os module
- Load settings at function start (once, not in loop)
- Use limit from settings in API call

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: Implement configurable observation limits and enhance search functionality

- Added configurable observation limits to batch regeneration scripts.
- Enhanced SearchManager to handle folder queries and normalize parameters.
- Introduced methods to check for direct child files in observations and sessions.
- Updated SearchOptions interface to include isFolder flag for filtering.
- Improved code quality with comprehensive reviews and anti-pattern checks.
- Cleaned up auto-generated CLAUDE.md files across various directories.
- Documented recent changes and improvements in CLAUDE.md files.

* build asset

* Project Context from Claude-Mem auto-added (can be auto removed at any time)

* CLAUDE.md updates

* fix: resolve CLAUDE.md files to correct directory in worktree setups

When using git worktrees, CLAUDE.md files were being written relative to
the worker's process.cwd() instead of the actual project directory. This
fix threads the project's cwd from message processing through to the file
writing utilities, ensuring CLAUDE.md files are created in the correct
project directory regardless of where the worker was started.

Changes:
- Add projectRoot parameter to updateFolderClaudeMdFiles for path resolution
- Thread projectRoot through ResponseProcessor call chain
- Track lastCwd from messages in SDKAgent, GeminiAgent, OpenRouterAgent
- Add tests for relative/absolute path handling with projectRoot

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* more project context updates

* context updates

* fix: preserve actual dates in folder CLAUDE.md generation

Previously, formatTimelineForClaudeMd used today's date for all
observations because the API only returned time (e.g., "4:30 PM")
without date information. This caused all historical observations
to appear as if they happened today.

Changes:
- SearchManager.findByFile now groups results by date with headers
  (e.g., "### Jan 4, 2026") matching formatSearchResults behavior
- formatTimelineForClaudeMd now parses these date headers and uses
  the correct date when constructing epochs for date grouping

The timeline dates are critical for claude-mem context - LLMs need
accurate temporal context to understand when work happened.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build: update worker assets with date parsing fix

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* claude-mem context: Fixed critical date parsing bug in PR #556

* fix: address PR #556 review items

- Use getWorkerHost() instead of hard-coded 127.0.0.1 in claude-md-utils
- Add error message and stack details to FOLDER_INDEX logging
- Add 5 new tests for worktree/projectRoot path resolution

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* Refactor CLAUDE documentation across multiple components and tests

- Updated CLAUDE.md files in src/ui/viewer, src/ui/viewer/constants, src/ui/viewer/hooks, tests/server, tests/worker/agents, and plans to reflect recent changes and improvements.
- Removed outdated entries and consolidated recent activities for clarity.
- Enhanced documentation for hooks, settings, and pagination implementations.
- Streamlined test suite documentation for server and worker agents, indicating recent test audits and cleanup efforts.
- Adjusted plans to remove obsolete entries and focus on current implementation strategies.

* docs: comprehensive v9.0 documentation audit and updates

- Add usage/folder-context to docs.json navigation (was documented but hidden!)
- Update introduction.mdx with v9.0 release notes (Live Context, Worktree Support, Windows Fixes)
- Add CLAUDE_MEM_WORKER_HOST setting to configuration.mdx
- Add Folder Context Files section with link to detailed docs
- Document worktree support in folder-context.mdx
- Update terminology from "mem-search skill" to "MCP tools" throughout active docs
- Update Search Pipeline in architecture/overview.mdx
- Update usage/getting-started.mdx with MCP tools terminology
- Update usage/claude-desktop.mdx title and terminology
- Update hooks-architecture.mdx reference

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add recent activity log for worker CLI with detailed entries

* chore: update CLAUDE.md context files

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: add brainstorming report for CLAUDE.md distribution architecture

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-05 22:41:42 -05:00
Alex Newman ad8ac7970d fix: Chroma connection errors and remove dead last_user_message code (#525)
* fix: distinguish connection errors from collection-not-found in ChromaSync

Previously, ensureCollection() caught ALL errors from chroma_get_collection_info
and assumed they meant "collection doesn't exist". This caused connection errors
like "Not connected" to trigger unnecessary collection creation attempts.

Now connection-related errors are re-thrown immediately instead of being
misinterpreted as missing collections.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: improve error handling for Chroma connection and collection creation

* fix: remove dead last_user_message from summarize flow

The last_user_message field was extracted from transcripts but never used.
In Claude Code transcripts, "user" type messages are mostly tool_results,
not actual user input. The user's original request is already stored in
user_prompts table.

This removes the false warning "Missing last_user_message when queueing
summary" which was complaining about missing data that didn't exist and
wasn't needed.

Changes:
- summary-hook: Only extract last_assistant_message
- SessionRoutes: Remove last_user_message from request body handling
- SessionManager.queueSummarize: Remove lastUserMessage parameter
- PendingMessage interface: Remove last_user_message field
- SDKSession interface: Remove last_user_message field
- All agents: Remove last_user_message from buildSummaryPrompt calls

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build artifacts for plugin

* Enhance error handling across multiple services

- Improved logging in `BranchManager.ts` to capture recovery checkout failures.
- Updated `PaginationHelper.ts` to log when file paths are plain strings instead of valid JSON.
- Enhanced error logging in `SDKAgent.ts` for Claude executable detection failures.
- Added logging for plain string handling in `SearchManager.ts` for files read and edited.
- Improved logging in `paths.ts` for git root detection failures.
- Enhanced JSON parsing error handling in `timeline-formatting.ts` with previews of failed inputs.
- Updated `transcript-parser.ts` to log summary of parse errors after processing transcript lines.
- Established a baseline for error handling practices in `error-handling-baseline.txt`.
- Documented error handling anti-pattern rules in `CLAUDE.md` to prevent silent failures and improve code quality.

* Add error handling anti-pattern detection script and guidelines

- Introduced `detect-error-handling-antipatterns.ts` to identify common error handling issues in TypeScript code.
- Created comprehensive documentation in `CLAUDE.md` outlining forbidden patterns, allowed patterns, and critical path protection rules.
- Implemented checks for empty catch blocks, logging practices, and try-catch block sizes to prevent silent failures and improve debugging.
- Established a reporting mechanism to summarize detected anti-patterns with severity levels.

* feat: add console filter bar and log line parsing with filtering capabilities

- Introduced a console filter bar with options to filter logs by level and component.
- Implemented parsing of log lines to extract structured data including timestamp, level, component, and correlation ID.
- Added functionality to toggle individual and all levels/components for filtering.
- Enhanced log line rendering with color coding based on log level and special message types.
- Improved responsiveness of the filter bar for smaller screens.

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-02 14:45:50 -05:00
Alex Newman 30b142d318 fix(session): Semantic renaming and memory session ID capture for resume
This commit fixes the session ID confusion identified in PR #475:

PROBLEM:
- Using contentSessionId (user's Claude Code session) for SDK resume was wrong
- Memory agent conversation should persist across the entire user session
- Each SDK call was starting fresh, losing memory agent continuity

SOLUTION:
1. Semantic Renaming (clarity):
   - claudeSessionId → contentSessionId (user's observed session)
   - sdkSessionId → memorySessionId (memory agent's session for resume)
   - Database migration 17 renames columns accordingly

2. Memory Session ID Capture:
   - SDKAgent captures session_id from first SDK message
   - Persists to database via updateMemorySessionId()
   - SessionManager loads memorySessionId on session init

3. Resume Logic Fixed:
   - Only resume if memorySessionId captured from previous interaction
   - Enables memory agent continuity across user prompts

Files changed: 33 (types, database, agents, hooks, routes)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-28 22:19:57 -05:00
Alex Newman 3ea0b60b9f feat: Mode system with inheritance and multilingual support (#412)
* feat: add domain management system with support for multiple domain profiles

- Introduced DomainManager class for loading and managing domain profiles.
- Added support for a default domain ('code') and fallback mechanisms.
- Implemented domain configuration validation and error handling.
- Created types for domain configuration, observation types, and concepts.
- Added new directory for domain profiles and ensured its existence.
- Updated SettingsDefaultsManager to include CLAUDE_MEM_DOMAIN setting.

* Refactor domain management to mode management

- Removed DomainManager class and replaced it with ModeManager for better clarity and functionality.
- Updated types from DomainConfig to ModeConfig and DomainPrompts to ModePrompts.
- Changed references from domains to modes in the settings and paths.
- Ensured backward compatibility by maintaining the fallback mechanism to the 'code' mode.

* feat: add migration 008 to support mode-agnostic observations and refactor service layer references in documentation

* feat: add new modes for code development and email investigation with detailed observation types and concepts

* Refactor observation parsing and prompt generation to incorporate mode-specific configurations

- Updated `parseObservations` function to use 'observation' as a universal fallback type instead of 'change', utilizing active mode's valid observation types.
- Modified `buildInitPrompt` and `buildContinuationPrompt` functions to accept a `ModeConfig` parameter, allowing for dynamic prompt content based on the active mode.
- Enhanced `ModePrompts` interface to include additional guidance for observers, such as recording focus and skip guidance.
- Adjusted the SDKAgent to load the active mode and pass it to prompt generation functions, ensuring prompts are tailored to the current mode's context.

* fix: correct mode prompt injection to preserve exact wording and type list visibility

- Add script to extract prompts from main branch prompts.ts into code.yaml
- Fix prompts.ts to show type list in XML template (e.g., "[ bugfix | feature | ... ]")
- Keep 'change' as fallback type in parser.ts (maintain backwards compatibility)
- Regenerate code.yaml with exact wording from original hardcoded prompts
- Build succeeds with no TypeScript errors

* fix: update ModeManager to load JSON mode files and improve validation

- Changed ModeManager to load mode configurations from JSON files instead of YAML.
- Removed the requirement for an "observation" type and updated validation to require at least one observation type.
- Updated fallback behavior in the parser to use the first type from the active mode's type list.
- Added comprehensive tests for mode loading, prompt injection, and parser integration, ensuring correct behavior across different modes.
- Introduced new mode JSON files for "Code Development" and "Email Investigation" with detailed observation types and prompts.

* Add mode configuration loading and update licensing information for Ragtime

- Implemented loading of mode configuration in WorkerService before database initialization.
- Added PolyForm Noncommercial License 1.0.0 to Ragtime directory.
- Created README.md for Ragtime with licensing details and usage guidelines.

* fix: add datasets directory to .gitignore to prevent accidental commits

* refactor: remove unused plugin package.json file

* chore: add package.json for claude-mem plugin with version 7.4.5

* refactor: remove outdated tests and improve error handling

- Deleted tests for ChromaSync error handling, smart install, strip memory tags, and user prompt tag stripping due to redundancy or outdated logic.
- Removed vitest configuration as it is no longer needed.
- Added a comprehensive implementation plan for fixing the modes system, addressing critical issues and improving functionality.
- Created a detailed test analysis report highlighting the quality and effectiveness of the current test suite, identifying areas for improvement.
- Introduced a new plugin package.json for runtime dependencies related to claude-mem hooks.

* refactor: remove parser regression tests to streamline codebase

* docs: update CLAUDE.md to clarify test management and changelog generation

* refactor: remove migration008 for mode-agnostic observations

* Refactor observation type handling to use ModeManager for icons and emojis

- Removed direct mappings of observation types to icons and work emojis in context-generator, FormattingService, SearchManager, and TimelineService.
- Integrated ModeManager to dynamically retrieve icons and emojis based on the active mode.
- Improved maintainability by centralizing the logic for observation type representation.

* Refactor observation metadata constants and update context generator

- Removed the explicit declaration of OBSERVATION_TYPES and OBSERVATION_CONCEPTS from observation-metadata.ts.
- Introduced fallback default strings for DEFAULT_OBSERVATION_TYPES_STRING and DEFAULT_OBSERVATION_CONCEPTS_STRING.
- Updated context-generator.ts to utilize observation types and concepts from ModeManager instead of constants.

* refactor: remove intermediate error handling from hooks (Phase 1)

Apply "fail fast" error handling strategy - errors propagate and crash loud
instead of being caught, wrapped, and re-thrown at intermediate layers.

Changes:
- Remove try/catch around fetch calls in all hooks - let errors throw
- Add try/catch ONLY around JSON.parse at entry points
- Delete error-handler.ts and hook-error-handler.ts (no longer needed)
- Update worker-utils.ts: functions now throw instead of returning null
- Update transcript-parser.ts: throw on missing path, empty file, malformed JSON
- Remove all handleWorkerError, handleFetchError imports

Philosophy: If something breaks, we KNOW it broke. No silent failures.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor: remove intermediate error handling from worker service (Phase 2)

Apply "fail fast" error handling strategy to worker service layer.

Changes:
- worker-service.ts: Remove try/catch from version endpoint, cleanup,
  MCP close, process enumeration, force kill, and isAlive check
- SessionRoutes.ts: Remove try/catch from JSON.stringify calls, remove
  .catch() from Chroma sync and SDK agent calls
- SettingsRoutes.ts: Remove try/catch from toggleMcp()
- DatabaseManager.ts: Remove .catch() from backfill and close operations
- SDKAgent.ts: Keep outer try/catch (top-level), remove .catch() from
  Chroma sync operations
- SSEBroadcaster.ts: Remove try/catch from broadcast and sendToClient

Philosophy: Errors propagate and crash loud. BaseRouteHandler.wrapHandler
provides top-level catching for HTTP routes.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor: remove error swallowing from SQLite services (Phase 3)

Apply "fail fast" error handling strategy to database layer.

SessionStore.ts migrations:
- ensureWorkerPortColumn(): Remove outer try/catch, let it throw
- ensurePromptTrackingColumns(): Remove outer try/catch, let it throw
- removeSessionSummariesUniqueConstraint(): Keep inner transaction
  rollback, remove outer catch
- addObservationHierarchicalFields(): Remove outer try/catch
- makeObservationsTextNullable(): Keep inner transaction rollback,
  remove outer catch
- createUserPromptsTable(): Keep inner transaction rollback, remove
  outer catch
- getFilesForSession(): Remove try/catch around JSON.parse

SessionSearch.ts:
- ensureFTSTables(): Remove try/catch, let it throw

Philosophy: Migration errors that are swallowed mean we think the
database is fine when it's not. Keep only inner transaction rollback
try/catch blocks.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* refactor: remove error hiding from utilities (Phase 4)

Apply "fail fast" error handling strategy to utility layer.

logger.ts:
- formatTool(): Remove try/catch, let JSON.parse throw on malformed input

context-generator.ts:
- loadContextConfig(): Remove try/catch, let parseInt throw on invalid settings
- Transcript extraction: Remove try/catch, let file read errors propagate

ChromaSync.ts:
- close(): Remove nested try/catch blocks, let close errors propagate

Philosophy: No silent fallbacks or hidden defaults. If something breaks,
we know it broke immediately.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* feat: serve static UI assets and update package root path

- Added middleware to serve static UI assets (JS, CSS, fonts, etc.) in ViewerRoutes.
- Updated getPackageRoot function to correctly return the package root directory as one level up from the current directory.

* feat: Enhance mode loading with inheritance support

- Introduced parseInheritance method to handle parent--override mode IDs.
- Added deepMerge method for recursively merging mode configurations.
- Updated loadMode method to support inheritance, loading parent modes and applying overrides.
- Improved error handling for missing mode files and logging for better traceability.

* fix(modes): correct inheritance file resolution and path handling

* Refactor code structure for improved readability and maintainability

* feat: Add mode configuration documentation and examples

* fix: Improve concurrency handling in translateReadme function

* Refactor SDK prompts to enhance clarity and structure

- Updated the `buildInitPrompt` and `buildContinuationPrompt` functions in `prompts.ts` to improve the organization of prompt components, including the addition of language instructions and footer messages.
- Removed redundant instructions and emphasized the importance of recording observations.
- Modified the `ModePrompts` interface in `types.ts` to include new properties for system identity, language instructions, and output format header, ensuring better flexibility and clarity in prompt generation.

* Enhance prompts with language instructions and XML formatting

- Updated `buildInitPrompt`, `buildSummaryPrompt`, and `buildContinuationPrompt` functions to include detailed language instructions in XML comments.
- Ensured that language instructions guide users to keep XML tags in English while writing content in the specified language.
- Modified the `buildSummaryPrompt` function to accept `mode` as a parameter for consistency.
- Adjusted the call to `buildSummaryPrompt` in `SDKAgent` to pass the `mode` argument.

* Refactor XML prompt generation in SDK

- Updated the buildInitPrompt, buildSummaryPrompt, and buildContinuationPrompt functions to use new placeholders for XML elements, improving maintainability and readability.
- Removed redundant language instructions in comments for clarity.
- Added new properties to ModePrompts interface for better structure and organization of XML placeholders and section headers.

* feat: Update observation prompts and structure across multiple languages

* chore: Remove planning docs and update Ragtime README

Remove ephemeral development artifacts:
- .claude/plans/modes-system-fixes.md
- .claude/test-analysis-report.md
- PROMPT_INJECTION_ANALYSIS.md

Update ragtime/README.md to explain:
- Feature is not yet implemented
- Dependency on modes system (now complete in PR #412)
- Ready to be scripted out in future release

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix: Move summary prompts to mode files for multilingual support

Summary prompts were hardcoded in English in prompts.ts, breaking
multilingual support. Now properly mode-based:

- Added summary_instruction, summary_context_label,
  summary_format_instruction, summary_footer to code.json
- Updated buildSummaryPrompt() to use mode fields instead of hardcoded text
- Added summary_footer with language instructions to all 10 language modes
- Language modes keep English prompts + language requirement footer

This fixes the gaslighting where we claimed full multilingual support
but summaries were still generated in English.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* chore: Clean up README by removing local preview instructions and streamlining beta features section

* Add translated README files for Ukrainian, Vietnamese, and Chinese languages

* Add new language modes for code development in multiple languages

- Introduced JSON configurations for Code Development in Greek, Finnish, Hebrew, Hindi, Hungarian, Indonesian, Italian, Dutch, Norwegian, Polish, Brazilian Portuguese, Romanian, Swedish, Turkish, and Ukrainian.
- Each configuration includes prompts for observations, summaries, and instructions tailored to the respective language.
- Ensured that all prompts emphasize the importance of generating observations without referencing the agent's actions.

* Add multilingual support links to README files in various languages

- Updated README.id.md, README.it.md, README.ja.md, README.ko.md, README.nl.md, README.no.md, README.pl.md, README.pt-br.md, README.ro.md, README.ru.md, README.sv.md, README.th.md, README.tr.md, README.uk.md, README.vi.md, and README.zh.md to include links to other language versions.
- Each README now features a centered paragraph with flags and links for easy navigation between different language documents.

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
2025-12-22 20:14:18 -05:00
Alex Newman bff10d49c9 fix(windows): Windows platform stabilization improvements (#378)
* chore: bump version to 7.3.6 in package.json

* Enhance worker readiness checks and MCP connection handling

- Updated health check endpoint to /api/readiness for better initialization tracking.
- Increased timeout for health checks and worker startup retries, especially for Windows.
- Added initialization flags to track MCP readiness and overall worker initialization status.
- Implemented a timeout guard for MCP connection to prevent hanging.
- Adjusted logging to reflect readiness state and errors more accurately.

* fix(windows): use Bun PATH detection in worker wrapper

Phase 2/8: Fix Bun PATH Detection in Worker Wrapper

- Import getBunPath() in worker-wrapper.ts for Bun detection
- Add Bun path resolution before spawning inner worker process
- Update spawn call to use detected Bun path instead of process.execPath
- Add logging to bun-path.ts when PATH detection succeeds
- Add logging when fallback paths are used
- Add Windows-specific validation for .exe extension
- Log warning with searched paths when Bun not found
- Fail fast with clear error message if Bun cannot be detected

This ensures worker-wrapper uses the correct Bun executable on Windows
even when Bun is not in PATH, fixing issue #371 where users reported
"Bun not in PATH" errors despite Bun being installed.

Addresses: #371

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix(windows): standardize child process spawning with windowsHide

Phase 3/8: Standardize Child Process Spawning (Windows)

Changes:
- Added windowsHide flag to ChromaSync MCP subprocess spawn
- Added Windows-specific process tracking (childPid) in ChromaSync
- Force-kill subprocess on Windows before closing transport to prevent zombie processes
- Updated cleanupOrphanedProcesses() to support Windows using PowerShell Get-CimInstance
- Use taskkill /T /F for proper process tree cleanup on Windows
- Audited BranchManager - confirmed windowsHide already present on all spawn calls

This prevents PowerShell windows from appearing during ChromaSync operations
and ensures proper cleanup of subprocess trees on Windows.

Addresses: #363, #361, #367, #371, #373, #374

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix(windows): enhance socket cleanup with recursive process tree management

Phase 4/8: Enhanced Socket Cleanup & Process Tree Management

Changes:
- Added recursive process tree enumeration in worker-wrapper.ts for Windows
- Enhanced killInner() to enumerate all descendants before killing
- Added fallback individual process kill if taskkill /T fails
- Added 10s timeout to ChromaSync.close() in DatabaseManager to prevent hangs
- Force nullify ChromaSync even on close failure to prevent resource leaks
- Improved logging to show full process tree during cleanup

This ensures complete cleanup of all child processes (ChromaSync MCP subprocess,
Python processes, etc.) preventing socket leaks and CLOSE_WAIT states.

Addresses: #363, #361

* fix(windows): consolidate project name extraction with drive root handling

Phase 5/8: Project Name Extraction Consolidation

- Created shared getProjectName() utility in src/utils/project-name.ts
- Handles edge case: drive roots (C:\, J:\) now return "drive-X" format
- Handles edge case: null/undefined/empty cwd now returns "unknown-project"
- Fixed missing null check bug in new-hook.ts
- Replaced duplicated path.basename(cwd) logic in:
  - src/hooks/context-hook.ts
  - src/hooks/new-hook.ts
  - src/services/context-generator.ts

Addresses: #374

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix(windows): increase timeouts and improve error messages

Phase 6/8: Increase Timeouts & Improve Error Messages

- Enhanced logger.ts with platform prefix (WIN32/DARWIN) and PID in all logs
- Added comprehensive Windows troubleshooting to ProcessManager error messages
- Enhanced Bun detection error message with Windows-specific troubleshooting
- All error messages now include GitHub issue numbers and docs links
- Windows timeout already increased to 2.0x multiplier in previous phases

Changes:
- src/utils/logger.ts: Added platform prefix and PID to all log output
- src/services/process/ProcessManager.ts: Enhanced error messages with troubleshooting steps
- src/utils/bun-path.ts: Added Windows-specific Bun detection error guidance

Addresses: #363, #361, #367, #371, #373, #374

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* fix(windows): add comprehensive Windows CI testing

Phase 7/8: Add Windows CI Testing

- Create automated Windows testing workflow
- Test worker startup/shutdown cycles
- Verify Bun PATH detection on Windows
- Test rapid restart scenarios
- Validate port cleanup after shutdown
- Check for zombie processes
- Run on all pushes and PRs to main/fix/feature branches

Addresses: #363, #361, #367, #371, #373, #374

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* ci(windows): remove build steps from Windows CI workflow

Build files are already included in the plugin folder, so npm install
and npm run build are unnecessary steps in the CI workflow.

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* revert: remove Windows CI workflow

The CI workflow cannot be properly implemented in the current architecture
due to limitations in testing the worker service in CI environments.

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* security: add PID validation and improve ChromaSync timeout handling

Address critical security and reliability issues identified in PR review:

**Security Fixes:**
- Add PID validation before all PowerShell/taskkill command execution
- Validate PIDs are positive integers to prevent command injection
- Apply validation in worker-wrapper.ts, worker-service.ts, and ChromaSync.ts

**Reliability Improvements:**
- Add timeout handling to ChromaSync client.close() (10s timeout)
- Add timeout handling to ChromaSync transport.close() (5s timeout)
- Implement force-kill fallback when ChromaSync close operations timeout
- Prevents hanging on shutdown and ensures subprocess cleanup

**Implementation Details:**
- PID validation checks: Number.isInteger(pid) && pid > 0
- Applied before all execSync taskkill calls on Windows
- Applied in process enumeration (Get-CimInstance) PowerShell commands
- ChromaSync.close() uses Promise.race for timeout enforcement
- Graceful degradation with force-kill fallback on timeout

Addresses PR #378 review feedback

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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

* Refactor ChromaSync client and transport closure logic

- Removed timeout handling for closing the Chroma client and transport.
- Simplified error logging for client and transport closure.
- Ensured subprocess cleanup logic is more straightforward.

* fix(worker): streamline Windows process management and cleanup

* revert: remove speculative LLM-generated complexity

Reverts defensive code that was added speculatively without user-reported issues:

- ChromaSync: Remove PID extraction and explicit taskkill (wrapper handles this)
- worker-wrapper: Restore simple taskkill /T /F (validated in v7.3.5)
- DatabaseManager: Remove Promise.race timeout wrapper
- hook-constants: Restore original timeout values
- logger: Remove platform/PID additions to every log line
- bun-path: Remove speculative logging

Keeps only changes that map to actual GitHub issues:
- #374: Drive root project name fix (getProjectName utility)
- #363: Readiness endpoint and Windows orphan cleanup
- #367: windowsHide on ChromaSync transport

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Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

---------

Co-authored-by: Claude Sonnet 4.5 <noreply@anthropic.com>
2025-12-17 18:44:04 -05:00