502f2fab027ab144adb51d680fc11fb5104c816d
86 Commits
| Author | SHA1 | Message | Date | |
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 Alex Newman
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502f2fab02 |
chore: bump version to 12.3.3
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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ba1ef6c42c |
fix: Issue Blowout 2026 — 25 bugs across worker, hooks, security, and search (#2080)
* fix: resolve search, database, and docker bugs (#1913, #1916, #1956, #1957, #2048) - Fix concept/concepts param mismatch in SearchManager.normalizeParams (#1916) - Add FTS5 keyword fallback when ChromaDB is unavailable (#1913, #2048) - Add periodic WAL checkpoint and journal_size_limit to prevent unbounded WAL growth (#1956) - Add periodic clearFailed() to purge stale pending_messages (#1957) - Fix nounset-safe TTY_ARGS expansion in docker/claude-mem/run.sh Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: prevent silent data loss on non-XML responses, add queue info to /health (#1867, #1874) - ResponseProcessor: mark messages as failed (with retry) instead of confirming when the LLM returns non-XML garbage (auth errors, rate limits) (#1874) - Health endpoint: include activeSessions count for queue liveness monitoring (#1867) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: cache isFts5Available() at construction time Addresses Greptile review: avoid DDL probe (CREATE + DROP) on every text query. Result is now cached in _fts5Available at construction. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve worker stability bugs — pool deadlock, MCP loopback, restart guard (#1868, #1876, #2053) - Replace flat consecutiveRestarts counter with time-windowed RestartGuard: only counts restarts within 60s window (cap=10), decays after 5min of success. Prevents stranding pending messages on long-running sessions. (#2053) - Add idle session eviction to pool slot allocation: when all slots are full, evict the idlest session (no pending work, oldest activity) to free a slot for new requests, preventing 60s timeout deadlock. (#1868) - Fix MCP loopback self-check: use process.execPath instead of bare 'node' which fails on non-interactive PATH. Fix crash misclassification by removing false "Generator exited unexpectedly" error log on normal completion. (#1876) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve hooks reliability bugs — summarize exit code, session-init health wait (#1896, #1901, #1903, #1907) - Wrap summarize hook's workerHttpRequest in try/catch to prevent exit code 2 (blocking error) on network failures or malformed responses. Session exit no longer blocks on worker errors. (#1901) - Add health-check wait loop to UserPromptSubmit session-init command in hooks.json. On Linux/WSL where hook ordering fires UserPromptSubmit before SessionStart, session-init now waits up to 10s for worker health before proceeding. Also wrap session-init HTTP call in try/catch. (#1907) - Close #1896 as already-fixed: mtime comparison at file-context.ts:255-267 bypasses truncation when file is newer than latest observation. - Close #1903 as no-repro: hooks.json correctly declares all hook events. Issue was Claude Code 12.0.1/macOS platform event-dispatch bug. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: security hardening — bearer auth, path validation, rate limits, per-user port (#1932, #1933, #1934, #1935, #1936) - Add bearer token auth to all API endpoints: auto-generated 32-byte token stored at ~/.claude-mem/worker-auth-token (mode 0600). All hook, MCP, viewer, and OpenCode requests include Authorization header. Health/readiness endpoints exempt for polling. (#1932, #1933) - Add path traversal protection: watch.context.path validated against project root and ~/.claude-mem/ before write. Rejects ../../../etc style attacks. (#1934) - Reduce JSON body limit from 50MB to 5MB. Add in-memory rate limiter (300 req/min/IP) to prevent abuse. (#1935) - Derive default worker port from UID (37700 + uid%100) to prevent cross-user data leakage on multi-user macOS. Windows falls back to 37777. Shell hooks use same formula via id -u. (#1936) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve search project filtering and import Chroma sync (#1911, #1912, #1914, #1918) - Fix per-type search endpoints to pass project filter to Chroma queries and SQLite hydration. searchObservations/Sessions/UserPrompts now use $or clause matching project + merged_into_project. (#1912) - Fix timeline/search methods to pass project to Chroma anchor queries. Prevents cross-project result leakage when project param omitted. (#1911) - Sync imported observations to ChromaDB after FTS rebuild. Import endpoint now calls chromaSync.syncObservation() for each imported row, making them visible to MCP search(). (#1914) - Fix session-init cwd fallback to match context.ts (process.cwd()). Prevents project key mismatch that caused "no previous sessions" on fresh sessions. (#1918) - Fix sync-marketplace restart to include auth token and per-user port. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve all CodeRabbit and Greptile review comments on PR #2080 - Fix run.sh comment mismatch (no-op flag vs empty array) - Gate session-init on health check success (prevent running when worker unreachable) - Fix date_desc ordering ignored in FTS session search - Age-scope failed message purge (1h retention) instead of clearing all - Anchor RestartGuard decay to real successes (null init, not Date.now()) - Add recordSuccess() calls in ResponseProcessor and completion path - Prevent caller headers from overriding bearer auth token - Add lazy cleanup for rate limiter map to prevent unbounded growth - Bound post-import Chroma sync with concurrency limit of 8 - Add doc_type:'observation' filter to Chroma queries feeding observation hydration - Add FTS fallback to all specialized search handlers (observations, sessions, prompts, timeline) - Add response.ok check and error handling in viewer saveSettings Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve CodeRabbit round-2 review comments - Use failure timestamp (COALESCE) instead of created_at_epoch for stale purge - Downgrade _fts5Available flag when FTS table creation fails - Escape FTS5 MATCH input by quoting user queries as literal phrases - Escape LIKE metacharacters (%, _, \) in prompt text search - Add response.ok check in initial settings load (matches save flow) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve CodeRabbit round-3 review comments - Include failed_at_epoch in COALESCE for age-scoped purge - Re-throw FTS5 errors so callers can distinguish failure from no-results - Wrap all FTS fallback calls in SearchManager with try/catch Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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77a2b3a0cb |
chore: bump version to 12.3.2
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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be99a5d690 |
fix: resolve search, database, and docker bugs (#2079)
* fix: resolve search, database, and docker bugs (#1913, #1916, #1956, #1957, #2048) - Fix concept/concepts param mismatch in SearchManager.normalizeParams (#1916) - Add FTS5 keyword fallback when ChromaDB is unavailable (#1913, #2048) - Add periodic WAL checkpoint and journal_size_limit to prevent unbounded WAL growth (#1956) - Add periodic clearFailed() to purge stale pending_messages (#1957) - Fix nounset-safe TTY_ARGS expansion in docker/claude-mem/run.sh Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: prevent silent data loss on non-XML responses, add queue info to /health (#1867, #1874) - ResponseProcessor: mark messages as failed (with retry) instead of confirming when the LLM returns non-XML garbage (auth errors, rate limits) (#1874) - Health endpoint: include activeSessions count for queue liveness monitoring (#1867) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: cache isFts5Available() at construction time Addresses Greptile review: avoid DDL probe (CREATE + DROP) on every text query. Result is now cached in _fts5Available at construction. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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f467763340 |
chore: bump version to 12.3.1
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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fc10491eae | chore: bump version to 12.3.0 | ||
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Alex Newman
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97c7c999b1 |
feat: basic claude-mem Docker container for easy spin-up (#2076)
* feat(evals): SWE-bench Docker scaffolding for claude-mem resolve-rate measurement Adds evals/swebench/ scaffolding per .claude/plans/swebench-claude-mem-docker.md. Agent image builds Claude Code 2.1.114 + locally-built claude-mem plugin; run-instance.sh executes the two-turn ingest/fix protocol per instance; run-batch.py orchestrates parallel Docker runs with per-instance isolation; eval.sh wraps the upstream SWE-bench harness; summarize.py aggregates reports. Orchestrator owns JSONL writes under a lock to avoid racy concurrent appends; agent writes its authoritative diff to CLAUDE_MEM_OUTPUT_DIR (/scratch in container mode) and the orchestrator reads it back. Scaffolding only — no Docker build or smoke test run yet. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(evals): OAuth credential mounting for Claude Max/Pro subscriptions Skips per-call API billing by extracting OAuth creds from host Keychain (macOS) or ~/.claude/.credentials.json (Linux) and bind-mounting them read-only into each agent container. Creds are copied into HOME=$SCRATCH/.claude at container start so the per-instance isolation model still holds. Adds run-batch.py --auth {oauth,api-key,auto} (auto prefers OAuth, falls back to API key). run-instance.sh accepts either ANTHROPIC_API_KEY or CLAUDE_MEM_CREDENTIALS_FILE. smoke-test.sh runs one instance end-to-end using OAuth for quick verification before batch runs. Caveat surfaced in docstrings: Max/Pro has per-window usage limits and is framed for individual developer use — batch evaluation may exhaust the quota or raise compliance questions. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * feat(docker): basic claude-mem container for ad-hoc testing Adds docker/claude-mem/ with a fresh spin-up image: - Dockerfile: FROM node:20 (reproduces anthropics/claude-code .devcontainer pattern — Anthropic ships the Dockerfile, not a pullable image); layers Bun + uv + locally-built plugin/; runs as non-root node user - entrypoint.sh: seeds OAuth creds from CLAUDE_MEM_CREDENTIALS_FILE into $HOME/.claude/.credentials.json, then exec's the command (default: bash) - build.sh: npm run build + docker build - run.sh: interactive launcher; auto-extracts OAuth from macOS Keychain (security find-generic-password) or ~/.claude/.credentials.json on Linux, mounts host .docker-claude-mem-data/ at /home/node/.claude-mem so the observations DB survives container exit Validated end-to-end: PostToolUse hook fires, queue enqueues, worker's SDK compression runs under subscription OAuth, observations row lands with populated facts/concepts/files_read, Chroma sync triggers. Also updates .gitignore/.dockerignore for the new runtime-output paths. Built plugin artifacts refreshed by the build step. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix(evals/swebench): non-root user, OAuth mount, Lite dataset default - Dockerfile.agent: switch to non-root \`node\` user (uid 1000); Claude Code refuses --permission-mode bypassPermissions when euid==0, which made every agent run exit 1 before producing a diff. Also move Bun + uv installs to system paths so the non-root user can exec them. - run-batch.py: add extract_oauth_credentials() that pulls from macOS Keychain / Linux ~/.claude/.credentials.json into a temp file and bind- mounts it at /auth/.credentials.json:ro with CLAUDE_MEM_CREDENTIALS_FILE. New --auth {oauth,api-key,auto} flag. New --dataset flag so the batch can target SWE-bench_Lite without editing the script. - smoke-test.sh: default DATASET to princeton-nlp/SWE-bench_Lite (Lite contains sympy__sympy-24152, Verified does not); accept DATASET env override. Caveat surfaced during testing: Max/Pro subscriptions have per-window usage limits; running 5 instances in parallel with the "read every source file" ingest prompt exhausted the 5h window within ~25 minutes (3/5 hit HTTP 429). Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address PR #2076 review comments - docker/claude-mem/run.sh: chmod 600 (not 644) on extracted OAuth creds to match what `claude login` writes; avoids exposing tokens to other host users. Verified readable inside the container under Docker Desktop's UID translation. - docker/claude-mem/Dockerfile: pin Bun + uv via --build-arg BUN_VERSION / UV_VERSION (defaults: 1.3.12, 0.11.7). Bun via `bash -s "bun-v<V>"`; uv via versioned installer URL `https://astral.sh/uv/<V>/install.sh`. - evals/swebench/smoke-test.sh: pipe JSON through stdin to `python3 -c` so paths with spaces/special chars can't break shell interpolation. - evals/swebench/run-batch.py: add --overwrite flag; abort by default when predictions.jsonl for the run-id already exists, preventing accidental silent discard of partial results. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address coderabbit review on PR #2076 Actionable (4): - Dockerfile uv install: wrap `chmod ... || true` in braces so the trailing `|| true` no longer masks failures from `curl|sh` via bash operator precedence (&& binds tighter than ||). Applied to both docker/claude-mem/ and evals/swebench/Dockerfile.agent. Added `set -eux` to the RUN lines. - docker/claude-mem/Dockerfile: drop unused `sudo` apt package (~2 MB). - run-batch.py: name each agent container (`swebench-agent-<id>-<pid>-<tid>`) and force-remove via `docker rm -f <name>` in the TimeoutExpired handler so timed-out runs don't leave orphan containers. Nitpicks (2): - smoke-test.sh: collapse 3 python3 invocations into 1 — parse the instance JSON once, print `repo base_commit`, and write problem.txt in the same call. - run-instance.sh: shallow clone via `--depth 1 --no-single-branch` + `fetch --depth 1 origin $BASE_COMMIT`. Falls back to a full clone if the server rejects the by-commit fetch. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address second coderabbit review on PR #2076 Actionable (3): - docker/claude-mem/run.sh: on macOS, fall back to ~/.claude/.credentials.json when the Keychain lookup misses (some setups still have file-only creds). Unified into a single creds_obtained gate so the error surface lists both sources tried. - docker/claude-mem/run.sh: drop `exec docker run` — `exec` replaces the shell so the EXIT trap (`rm -f "$CREDS_FILE"`) never fires and the extracted OAuth JSON leaks to disk until tmpfs cleanup. Run as a child instead so the trap runs on exit. - evals/swebench/smoke-test.sh: actually enforce the TIMEOUT env var. Pick `timeout` or `gtimeout` (coreutils on macOS), fall back to uncapped with a warning. Name the container so exit-124 from timeout can `docker rm -f` it deterministically. Nitpick from the same review (consolidated python3 calls in smoke-test.sh) was already addressed in the prior commit ef621e00. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address third coderabbit review on PR #2076 Actionable (1): - evals/swebench/smoke-test.sh: the consolidated python heredoc had competing stdin redirections — `<<'PY'` (script body) AND `< "$INSTANCE_JSON"` (data). The heredoc won, so `json.load(sys.stdin)` saw an empty stream and the parse would have failed at runtime. Pass INSTANCE_JSON as argv[2] and `open()` it inside the script instead; the heredoc is now only the script body, which is what `python3 -` needs. Nitpicks (2): - evals/swebench/smoke-test.sh: macOS Keychain lookup now falls through to ~/.claude/.credentials.json on miss (matches docker/claude-mem/run.sh). - evals/swebench/run-batch.py: extract_oauth_credentials() no longer early-returns on Darwin keychain miss; falls through to the on-disk creds file so macOS setups with file-only credentials work in batch mode too. Functional spot-check of the parse fix confirmed: REPO/BASE_COMMIT populated and problem.txt written from a synthetic INSTANCE_JSON. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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bbfb65668f | chore: bump version to 12.2.3 | ||
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Alex Newman
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2337997c48 |
fix(parser): stop warning on normal observation responses (#2074)
parseSummary runs on every agent response, not just summary turns. When the turn is a normal observation, the LLM correctly emits <observation> and no <summary> — but the fallthrough branch from #1345 treated this as prompt misbehavior and logged "prompt conditioning may need strengthening" every time. That assumption stopped holding after #1633 refactored the caller to always invoke parseSummary with a coerceFromObservation flag. Gate the whole observation-on-summary path on coerceFromObservation. On a real summary turn, coercion still runs and logs the legitimate "coercion failed" warning when the response has no usable content. On an observation turn, parseSummary returns null silently, which is the correct behavior. Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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b1dfec0f43 | chore: bump version to 12.2.2 | ||
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Alex Newman
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789efe4234 |
feat: disable subagent summaries, label subagent observations (#2073)
* feat: disable subagent summaries and label subagent observations Detect Claude Code subagent hook context via `agent_id`/`agent_type` on stdin, short-circuit the Stop-hook summary path when present, and thread the subagent identity end-to-end onto observation rows (new `agent_type` and `agent_id` columns, migration 010 at version 27). Main-session rows remain NULL; content-hash dedup is unchanged. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address PR #2073 review feedback - Narrow summarize subagent guard to agentId only so --agent-started main sessions still own their summary (agentType alone is main-session). - Remove now-dead agentId/agentType spreads from the summarize POST body. - Always overwrite pendingAgentId/pendingAgentType in SDK/Gemini/OpenRouter agents (clears stale subagent identity on main-session messages after a subagent message in the same batch). - Add idx_observations_agent_id index in migration 010 + the mirror migration in SessionStore + the runner. - Replace console.log in migration010 with logger.debug. - Update summarize test: agentType alone no longer short-circuits. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * fix: address CodeRabbit + claude-review iteration 4 feedback - SessionRoutes.handleSummarizeByClaudeId: narrow worker-side guard to agentId only (matches hook-side). agentType alone = --agent main session, which still owns its summary. - ResponseProcessor: wrap storeObservations in try/finally so pendingAgentId/Type clear even if storage throws. Prevents stale subagent identity from leaking into the next batch on error. - SessionStore.importObservation + bulk.importObservation: persist agent_type/agent_id so backup/import round-trips preserve subagent attribution. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * polish: claude-review iteration 5 cleanup - Use ?? not || for nullable subagent fields in PendingMessageStore (prevents treating empty string as null). - Simplify observation.ts body spread — include fields unconditionally; JSON.stringify drops undefined anyway. - Narrow any[] to Array<{ name: string }> in migration010 column checks. - Add trailing newline to migrations.ts. - Document in observations/store.ts why the dedup hash intentionally excludes agent fields. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * polish: claude-review iteration 7 feedback - claude-code adapter: add 128-char safety cap on agent_id/agent_type so a malformed Claude Code payload cannot balloon DB rows. Empty strings now also treated as absent. - migration010: state-aware debug log lists only columns actually added; idempotent re-runs log "already present; ensured indexes". - Add 3 adapter tests covering the length cap boundary and empty-string rejection. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> * perf: skip subagent summary before worker bootstrap Move the agentId short-circuit above ensureWorkerRunning() so a Stop hook fired inside a subagent does not trigger worker startup just to return early. Addresses CodeRabbit nit on summarize.ts:36-47. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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11666e9ffb |
chore: bump version to 12.2.0
Publish to npm / publish (push) Has been cancelled
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Alex Newman
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f6fda8fff4 |
fix(worktree): address CodeRabbit PR review feedback
- Document --branch override in npx-cli help text - Guard ContextBuilder against empty projects[] override; fall back to cwd-derived primary - Ensure merged_into_project indexes are created even if ALTER ran in a prior partial migration - Reject adopt --branch/--cwd flags with missing or flag-like values - Use defined --color-border-primary token for merged badge border Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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0a5f072aaf |
build(worktree): rebuild plugin artifacts for worktree adoption feature
Regenerated worker-service.cjs, context-generator.cjs, viewer.html, and viewer-bundle.js to reflect all six implementation phases of the merged- worktree adoption feature. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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9d695f53ed |
chore: remove auto-generated per-directory CLAUDE.md files
Leftover artifacts from an abandoned context-injection feature. The project-level CLAUDE.md stays; the directory-level ones were generated timeline scaffolding that never panned out. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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c76a439491 |
fix: drop orphan flag when filtering empty-string spawn args (#2049)
Observations were 100% failing on Claude Code 2.1.109+ because the Agent SDK emits ["--setting-sources", ""] when settingSources defaults to []. The existing Bun-workaround filter stripped the empty string but left the orphan --setting-sources flag, which then consumed --permission-mode as its value, crashing the subprocess with: Error processing --setting-sources: Invalid setting source: --permission-mode. Make the filter pair-aware: when an empty arg follows a --flag, drop both so the SDK default (no setting sources) is preserved by omission. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com> |
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Alex Newman
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ebefae864e |
chore: bump version to 12.1.4
Publish to npm / publish (push) Has been cancelled
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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4c792f026d |
build: rebuild plugin artifacts after $CMEM header revert
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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4ddf57610a |
chore: bump version to 12.1.3
Publish to npm / publish (push) Has been cancelled
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Alex Newman
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a390a537c9 |
fix: broadcast uses summaryForStore to support salvaged summaries (#1718)
syncAndBroadcastSummary was using the raw ParsedSummary (null when salvaged) instead of summaryForStore for the SSE broadcast, causing a crash when the LLM returns <observation> without <summary> tags. Also removes misplaced tree-sitter docs from mem-search/SKILL.md (belongs in smart-explore). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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29f2d0bc02 |
chore: bump version to 12.0.1
Publish to npm / publish (push) Has been cancelled
Patch release for the MCP server bun:sqlite crash fix landed in
PR #1645 (commit
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Alex Newman
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d0676aa049 |
feat: file-read gate allows Edit, add legacy-peer-deps for grammar install
- Change file-read gate from deny to allow with limit:1, injecting the observation timeline as additionalContext. Edit now works on gated files since the file registers as "read" with near-zero token cost. - Add updatedInput to HookResult type for PreToolUse hooks. - Add .npmrc with legacy-peer-deps=true for tree-sitter peer dep conflicts. - Add --legacy-peer-deps to npm fallback paths in smart-install.js so end users without bun can install the 24 grammar packages. - Rebuild plugin artifacts. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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7996dfd5cd |
Merge branch 'thedotmack/add-lang-parsers' into integration/validation-batch
Adds 24-language support for smart-explore: Kotlin, Swift, Elixir, Lua, Scala, Bash, Haskell, Zig, CSS, SCSS, TOML, YAML, SQL, Markdown. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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95889c7b4e |
feat: expand smart-explore to 24 languages with markdown support and user-installable grammars
Add 15 new tree-sitter language grammars (Kotlin, Swift, PHP, Elixir, Lua, Scala, Bash, Haskell, Zig, CSS, SCSS, TOML, YAML, SQL, Markdown) with verified SCM queries. Add markdown-specific formatting with heading hierarchy, code block detection, and section-aware unfold. Add user-installable grammar system via .claude-mem.json config with custom query file support. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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25bb93a995 |
fix: address PR #1641 review comments (round 2)
- Remove duplicate TranscriptWatcher/config imports in worker-service.ts - Use normalizePlatformSource in handleSessionInitByClaudeId for consistency - Don't skip DB completion when session not in memory (completeByClaudeId) - Add try-catch around fetch in useContextPreview refresh callback - Deduplicate store.getAllProjects() call in DataRoutes - Fix malformed comment separators in migration runner - Fix missing closing brace and JSDoc opener (merge artifact) in migration runner Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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f4570f2a0a |
chore: rebuild plugin artifacts
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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b8999c1181 | Merge branch 'thedotmack/file-read-timeline-inject' into integration/validation-batch | ||
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Alex Newman
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d3262ae1f4 |
chore: rebuild after merge from main
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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a7ebc35ee0 |
chore: bump version to 11.0.0
Publish to npm / publish (push) Has been cancelled
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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3b34feb779 |
chore: rebuild plugin artifacts for v10.7.2 with Alessandro's stability PRs (#1607)
Rebuilt worker-service, mcp-server, and viewer-bundle to include: - SIGTERM drain for orphaned pending messages (#1567) - Multi-machine sync script (#1570) - 3 upstream bug fixes: summarize loop, ChromaSync duplicates, TOCTOU port check (#1566) - Semantic context injection via Chroma (#1568) - Tier routing by queue complexity (#1569) - Architecture overview + production guide docs (#1574) Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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b385570884 |
chore: bump version to 10.7.2
Publish to npm / publish (push) Has been cancelled
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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29ef3f5603 |
fix: downgrade concept-type cleanup log from error to debug (#1606)
The parser correctly strips observation types from concepts arrays when the LLM ignores the prompt instruction. This is routine data normalization, not an error — downgrade to debug to reduce log noise. Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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76a880a3d6 |
feat: update install CLI, ESM compat, and Gemini CLI docs
Fixes CursorHooksInstaller ESM compatibility, updates install command with improved path resolution, and refreshes built plugin artifacts. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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huakson
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4f6fb9e614 |
fix: address platform source review feedback
Tighten platform source persistence so legacy callers cannot silently relabel existing sessions, repair migration 24 when schema_versions drifts from the real schema, and polish the follow-up UI/error-handler review nits. - only backfill platform_source when it is blank and raise on explicit source conflicts for an existing session - make migration 24 verify both the sdk_sessions column and its index before treating it as applied - expose platform_source from the functional session getters and add regression tests for source preservation and schema drift recovery - add the required APPROVED OVERRIDE annotation for centralized HTTP error translation - keep mobile source pills on a single horizontal row |
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huakson
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2b60dd2932 |
feat: isolate Claude and Codex session sources
Persist platform_source across session creation, transcript ingestion, API query paths, and viewer state so Claude and Codex data can coexist without bleeding into each other. - add platform-source normalization helpers and persist platform_source in sdk_sessions via migration 24 with backfill and indexing - thread platformSource through CLI hooks, transcript processing, context generation, pagination, search routes, SSE payloads, and session management - expose source-aware project catalogs, viewer tabs, context preview selectors, and source badges for observations, prompts, and summaries - start the transcript watcher from the worker for transcript-based clients and preserve platform source during Codex ingestion - auto-start the worker from the MCP server for MCP-only clients and tighten stdio-driven cleanup during shutdown - keep createSDKSession backward compatible with existing custom-title callers while allowing explicit platform source forwarding |
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Alex Newman
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4d7bec4d05 |
fix: stop spinner from spinning forever (#1440)
* fix: stop spinner from spinning forever due to orphaned DB messages The activity spinner never stopped because isAnySessionProcessing() queried ALL pending/processing messages in the database, including orphaned messages from dead sessions that no generator would ever process. Root cause: isAnySessionProcessing() used hasAnyPendingWork() which is a global DB scan. Changed it to use getTotalQueueDepth() which only checks sessions in the active in-memory Map. Additional fixes: - Add terminateSession() to enforce restart-or-terminate invariant - Fix 3 zombie paths in .finally() handler that left sessions alive - Clean up idle sessions from memory on successful completion - Remove redundant bare isProcessing:true broadcast - Replace inline require() with proper accessor - Add 8 regression tests for session termination invariant Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: address review findings — idle-timeout race, double broadcast, query amplification - Move pendingCount check before idle-timeout termination to prevent abandoning fresh messages that arrive between idle abort and .finally() - Move broadcastProcessingStatus() inside restart branch only — the else branch already broadcasts via removeSessionImmediate callback - Compute queueDepth once in broadcastProcessingStatus() and derive isProcessing from it, eliminating redundant double iteration Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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d54e574251 |
chore: bump version to 10.6.1
Publish to npm / publish (push) Has been cancelled
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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8c79b99384 |
chore: bump version to 10.6.0
Publish to npm / publish (push) Has been cancelled
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Alex Newman
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80a8c90a1a |
feat: add embedded Process Supervisor for unified process lifecycle (#1370)
* feat: add embedded Process Supervisor for unified process lifecycle management Consolidates scattered process management (ProcessManager, GracefulShutdown, HealthMonitor, ProcessRegistry) into a unified src/supervisor/ module. New: ProcessRegistry with JSON persistence, env sanitizer (strips CLAUDECODE_* vars), graceful shutdown cascade (SIGTERM → 5s wait → SIGKILL with tree-kill on Windows), PID file liveness validation, and singleton Supervisor API. Fixes #1352 (worker inherits CLAUDECODE env causing nested sessions) Fixes #1356 (zombie TCP socket after Windows reboot) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add session-scoped process reaping to supervisor Adds reapSession(sessionId) to ProcessRegistry for killing session-tagged processes on session end. SessionManager.deleteSession() now triggers reaping. Tightens orphan reaper interval from 60s to 30s. Fixes #1351 (MCP server processes leak on session end) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add Unix domain socket support for worker communication Introduces socket-manager.ts for UDS-based worker communication, eliminating port 37777 collisions between concurrent sessions. Worker listens on ~/.claude-mem/sockets/worker.sock by default with TCP fallback. All hook handlers, MCP server, health checks, and admin commands updated to use socket-aware workerHttpRequest(). Backwards compatible — settings can force TCP mode via CLAUDE_MEM_WORKER_TRANSPORT=tcp. Fixes #1346 (port 37777 collision across concurrent sessions) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: remove in-process worker fallback from hook command Removes the fallback path where hook scripts started WorkerService in-process, making the worker a grandchild of Claude Code (killed by sandbox). Hooks now always delegate to ensureWorkerStarted() which spawns a fully detached daemon. Fixes #1249 (grandchild process killed by sandbox) Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat: add health checker and /api/admin/doctor endpoint Adds 30-second periodic health sweep that prunes dead processes from the supervisor registry and cleans stale socket files. Adds /api/admin/doctor endpoint exposing supervisor state, process liveness, and environment health. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * test: add comprehensive supervisor test suite 64 tests covering all supervisor modules: process registry (18 tests), env sanitizer (8), shutdown cascade (10), socket manager (15), health checker (5), and supervisor API (6). Includes persistence, isolation, edge cases, and cross-module integration scenarios. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: revert Unix domain socket transport, restore TCP on port 37777 The socket-manager introduced UDS as default transport, but this broke the HTTP server's TCP accessibility (viewer UI, curl, external monitoring). Since there's only ever one worker process handling all sessions, the port collision rationale for UDS doesn't apply. Reverts to TCP-only, removing ~900 lines of unnecessary complexity. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * chore: remove dead code found in pre-landing review Remove unused `acceptingSpawns` field from Supervisor class (written but never read — assertCanSpawn uses stopPromise instead) and unused `buildWorkerUrl` import from context handler. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * updated gitignore * fix: address PR review feedback - downgrade HTTP logging, clean up gitignore, harden supervisor - Downgrade request/response HTTP logging from info to debug to reduce noise - Remove unused getWorkerPort imports, use buildWorkerUrl helper - Export ENV_PREFIXES/ENV_EXACT_MATCHES from env-sanitizer, reuse in Server.ts - Fix isPidAlive(0) returning true (should be false) - Add shutdownInitiated flag to prevent signal handler race condition - Make validateWorkerPidFile testable with pidFilePath option - Remove unused dataDir from ShutdownCascadeOptions - Upgrade reapSession log from debug to warn - Rename zombiePidFiles to deadProcessPids (returns actual PIDs) - Clean up gitignore: remove duplicate datasets/, stale ~*/ and http*/ patterns - Fix tests to use temp directories instead of relying on real PID file Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com> |
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Vincent Leraitre
|
237a4c37f8 |
fix: always pass --ssl flag to chroma-mcp in remote mode (#1286)
* fix: always pass --ssl flag to chroma-mcp in remote mode The chroma-mcp CLI defaults to SSL when using --client-type http. When CLAUDE_MEM_CHROMA_SSL is false (the common case for local ChromaDB servers), buildCommandArgs() omitted --ssl entirely, causing chroma-mcp to attempt an SSL connection to a plain HTTP server and fail with "Could not connect to a Chroma server". Always pass --ssl with an explicit true/false value so the user's CLAUDE_MEM_CHROMA_SSL setting is faithfully forwarded. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * test: add regression tests for ChromaMcpManager SSL flag fix Adds 4 focused test cases verifying buildCommandArgs() produces correct --ssl args, covering SSL=false, SSL=true, unset (defaults to false), and local mode (no --ssl flag). Requested by @xkonjin in PR #1286 review. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: rebuild checked-in bundles to include SSL flag fix Rebuild all bundles against upstream/main so the --ssl <true|false> fix is present in the runtime artifacts that hooks and the marketplace plugin actually execute. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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6581d2ef45 |
fix: unify mode type/concept loading to always use mode definition (#1316)
* fix: unify mode type/concept loading to always use mode definition Code mode previously read observation types/concepts from settings.json while non-code modes read from their mode JSON definition. This caused stale filters to persist when switching between modes. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * refactor: remove dead observation type/concept settings constants CLAUDE_MEM_CONTEXT_OBSERVATION_TYPES and OBSERVATION_CONCEPTS are no longer read by ContextConfigLoader since all modes now use their mode definition. Removes the constants, defaults, UI controls, and the now-empty observation-metadata.ts file. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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ff503d08a7 |
MAESTRO: Merge PR #657 - Add generate/clean CLI commands for CLAUDE.md management
Cherry-picked source changes from PR #657 (224 commits behind main). Adds `claude-mem generate` and `claude-mem clean` CLI commands: - New src/cli/claude-md-commands.ts with generateClaudeMd() and cleanClaudeMd() - Worker service generate/clean case handlers with --dry-run support - CLAUDE_MD logger component type - Uses shared isDirectChild from path-utils.ts (DRY improvement over PR original) Skipped from PR: 91 CLAUDE.md file deletions (stale), build artifacts, .claude/plans/ dev artifact, smart-install.js shell alias auto-injection (aggressive profile modification without consent). Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
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d0b4c7ee59 |
MAESTRO: Add DOMPurify XSS defense-in-depth to TerminalPreview (closes PR #896)
PR #896 identified a valid XSS concern in TerminalPreview.tsx but was broken (missing DOMPurify import and dependency). The existing escapeXML:true on AnsiToHtml already mitigates the vector, but DOMPurify adds defense-in-depth sanitization. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> |
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Alex Newman
|
6ee6e21eb5 |
chore: bump version to 9.0.14
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
|
4df9f61347 |
refactor: implement in-process worker architecture for hooks (#722)
* fix: stop generating empty CLAUDE.md files - Return empty string instead of "No recent activity" when no observations exist - Skip writing CLAUDE.md files when formatted content is empty - Remove redundant "auto-generated by claude-mem" HTML comment - Clean up 98 existing empty CLAUDE.md files across the codebase - Update tests to expect empty string for empty input Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets * refactor: implement in-process worker architecture for hooks Replaces spawn-based worker startup with in-process architecture: - Hook processes now become the worker when port 37777 is free - Eliminates Windows spawn issues (NO SPAWN rule) - SessionStart chains: smart-install && stop && context Key changes: - worker-service.ts: hook case starts WorkerService in-process - hook-command.ts: skipExit option prevents process.exit() when hosting worker - hooks.json: single chained command replaces separate start/hook commands - worker-utils.ts: ensureWorkerRunning() returns boolean, doesn't block - handlers: graceful fallback when worker unavailable All 761 tests pass. Manual verification confirms hook stays alive as worker. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * context * a * MAESTRO: Mark PR #722 test verification task complete All 797 tests passed (3 skipped, 0 failed) after merge conflict resolution. Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * MAESTRO: Mark PR #722 build verification task complete * MAESTRO: Mark PR #722 code review task complete Code review verified: - worker-service.ts hook case starts WorkerService in-process - hook-command.ts has skipExit option - hooks.json uses single chained command - worker-utils.ts ensureWorkerRunning() returns boolean Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * MAESTRO: Mark PR #722 conflict resolution push task complete Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
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817c4348b1 | build assets! | ||
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Alex Newman
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2659ec3231 |
fix: Claude Code 2.1.1 compatibility + log-level audit + path validation fixes (#614)
* Refactor CLAUDE.md and related files for December 2025 updates - Updated CLAUDE.md in src/services/worker with new entries for December 2025, including changes to Search.ts, GeminiAgent.ts, SDKAgent.ts, and SessionManager.ts. - Revised CLAUDE.md in src/shared to reflect updates and new entries for December 2025, including paths.ts and worker-utils.ts. - Modified hook-constants.ts to clarify exit codes and their behaviors. - Added comprehensive hooks reference documentation for Claude Code, detailing usage, events, and examples. - Created initial CLAUDE.md files in various directories to track recent activity. * fix: Merge user-message-hook output into context-hook hookSpecificOutput - Add footer message to additionalContext in context-hook.ts - Remove user-message-hook from SessionStart hooks array - Fixes issue where stderr+exit(1) approach was silently discarded Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Update logs and documentation for recent plugin and worker service changes - Added detailed logs for worker service activities from Dec 10, 2025 to Jan 7, 2026, including initialization patterns, cleanup confirmations, and diagnostic logging. - Updated plugin documentation with recent activities, including plugin synchronization and configuration changes from Dec 3, 2025 to Jan 7, 2026. - Enhanced the context hook and worker service logs to reflect improvements and fixes in the plugin architecture. - Documented the migration and verification processes for the Claude memory system and its integration with the marketplace. * Refactor hooks architecture and remove deprecated user-message-hook - Updated hook configurations in CLAUDE.md and hooks.json to reflect changes in session start behavior. - Removed user-message-hook functionality as it is no longer utilized in Claude Code 2.1.0; context is now injected silently. - Enhanced context-hook to handle session context injection without user-visible messages. - Cleaned up documentation across multiple files to align with the new hook structure and removed references to obsolete hooks. - Adjusted timing and command execution for hooks to improve performance and reliability. * fix: Address PR #610 review issues - Replace USER_MESSAGE_ONLY test with BLOCKING_ERROR test in hook-constants.test.ts - Standardize Claude Code 2.1.0 note wording across all three documentation files - Exclude deprecated user-message-hook.ts from logger-usage-standards test Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: Remove hardcoded fake token counts from context injection Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Address PR #610 review issues by fixing test files, standardizing documentation notes, and verifying code quality improvements. * fix: Add path validation to CLAUDE.md distribution to prevent invalid directory creation - Add isValidPathForClaudeMd() function to reject invalid paths: - Tilde paths (~) that Node.js doesn't expand - URLs (http://, https://) - Paths with spaces (likely command text or PR references) - Paths with # (GitHub issue/PR references) - Relative paths that escape project boundary - Integrate validation in updateFolderClaudeMdFiles loop - Add 6 unit tests for path validation - Update .gitignore to prevent accidental commit of malformed directories - Clean up existing invalid directories (~/, PR #610..., git diff..., https:) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: Implement path validation in CLAUDE.md generation to prevent invalid directory creation - Added `isValidPathForClaudeMd()` function to validate file paths in `src/utils/claude-md-utils.ts`. - Integrated path validation in `updateFolderClaudeMdFiles` to skip invalid paths. - Added 6 new unit tests in `tests/utils/claude-md-utils.test.ts` to cover various rejection cases. - Updated `.gitignore` to prevent tracking of invalid directories. - Cleaned up existing invalid directories in the repository. * feat: Promote critical WARN logs to ERROR level across codebase Comprehensive log-level audit promoting 38+ WARN messages to ERROR for improved debugging and incident response: - Parser: observation type errors, data contamination - SDK/Agents: empty init responses (Gemini, OpenRouter) - Worker/Queue: session recovery, auto-recovery failures - Chroma: sync failures, search failures (now treated as critical) - SQLite: search failures (primary data store) - Session/Generator: failures, missing context - Infrastructure: shutdown, process management failures - File Operations: CLAUDE.md updates, config reads - Branch Management: recovery checkout failures Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: Address PR #614 review issues - Remove incorrectly tracked tilde-prefixed files from git - Fix absolute path validation to check projectRoot boundaries - Add test coverage for absolute path validation edge cases Closes review issues: - Issue 1: ~/ prefixed files removed from tracking - Issue 3: Absolute paths now validated against projectRoot - Issue 4: Added 3 new test cases for absolute path scenarios Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets and context --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
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a3d6bfc7dd |
feat: Update CLAUDE.md files with recent test activities and improvements
- Added detailed entries for test activities across various modules including `export-types.test.ts`, `server.test.ts`, `smart-install.test.ts`, and others. - Documented significant changes in test coverage, cleanup efforts, and regression tests. - Enhanced the `plans` documentation with recent implementation strategies and PR follow-ups. - Introduced a comprehensive report on Windows platform challenges and solutions, detailing issues like zombie ports, console popups, and process management. - Established a new `ProcessManager` architecture to address Windows-specific issues and improve reliability. - Updated integration tests to reflect recent changes and ensure comprehensive coverage. |
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Alex Newman
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e1ab73decc |
feat: Live Context System with Distributed CLAUDE.md Generation (#556)
* docs: add folder index generator plan RFC for auto-generating folder-level CLAUDE.md files with observation timelines. Includes IDE symlink support and root CLAUDE.md integration. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: implement folder index generator (Phase 1) Add automatic CLAUDE.md generation for folders containing observed files. This enables IDE context providers to access relevant memory observations. Core modules: - FolderDiscovery: Extract folders from observation file paths - FolderTimelineCompiler: Compile chronological timeline per folder - ClaudeMdGenerator: Write CLAUDE.md with tag-based content replacement - FolderIndexOrchestrator: Coordinate regeneration on observation save Integration: - Event-driven regeneration after observation save in ResponseProcessor - HTTP endpoints for folder discovery, timeline, and manual generation - Settings for enabling/configuring folder index behavior The <claude-mem-context> tag wrapping ensures: - Manual CLAUDE.md content is preserved - Auto-generated content won't be recursively observed - Clean separation between user and system content 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add updateFolderClaudeMd function to CursorHooksInstaller Adds function to update CLAUDE.md files for folders touched by observations. Uses existing /api/search/by-file endpoint, preserves content outside <claude-mem-context> tags, and writes atomically via temp file + rename. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: hook updateFolderClaudeMd into ResponseProcessor Calls updateFolderClaudeMd after observation save to update folder-level CLAUDE.md files. Uses fire-and-forget pattern with error logging. Extracts file paths from saved observations and workspace path from registry. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add timeline formatting for folder CLAUDE.md files Implements formatTimelineForClaudeMd function that transforms API response into compact markdown table format. Converts emojis to text labels, handles ditto marks for timestamps, and groups under "Recent" header. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: remove old folder-index implementation Deletes redundant folder-index services that were replaced by the simpler updateFolderClaudeMd approach in CursorHooksInstaller.ts. Removed: - src/services/folder-index/ directory (5 files) - FolderIndexRoutes.ts - folder-index settings from SettingsDefaultsManager - folder-index route registration from worker-service 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add worktree-aware project filtering for unified timelines Detect git worktrees and show both parent repo and worktree observations in the session start timeline. When running in a worktree, the context now includes observations from both projects, interleaved chronologically. - Add detectWorktree() utility to identify worktree directories - Add getProjectContext() to return parent + worktree projects - Update context hook to pass multi-project queries - Add queryObservationsMulti() and querySummariesMulti() for IN clauses - Maintain backward compatibility with single-project queries 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * fix: restructure logging to prove session correctness and reduce noise Add critical logging at each stage of the session lifecycle to prove the session ID chain (contentSessionId → sessionDbId → memorySessionId) stays aligned. New logs include CREATED, ENQUEUED, CLAIMED, MEMORY_ID_CAPTURED, STORING, and STORED. Move intermediate migration and backfill progress logs to DEBUG level to reduce noise, keeping only essential initialization and completion logs at INFO level. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * refactor: extract folder CLAUDE.md utils to shared location Moves folder CLAUDE.md utilities from CursorHooksInstaller to a new shared utils file. Removes Cursor registry dependency - file paths from observations are already absolute, no workspace lookup needed. New file: src/utils/claude-md-utils.ts - replaceTaggedContent() - preserves user content outside tags - writeClaudeMdToFolder() - atomic writes with tag preservation - formatTimelineForClaudeMd() - API response to compact markdown - updateFolderClaudeMdFiles() - orchestrates folder updates 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: trigger folder CLAUDE.md updates when observations are saved The folder CLAUDE.md update was previously only triggered in syncAndBroadcastSummary, but summaries run with observationCount=0 (observations are saved separately). Moved the update logic to syncAndBroadcastObservations where file paths are available. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * all the claudes * test: add unit tests for claude-md-utils pure functions Add 11 tests covering replaceTaggedContent and formatTimelineForClaudeMd: - replaceTaggedContent: empty content, tag replacement, appending, partial tags - formatTimelineForClaudeMd: empty input, parsing, ditto marks, session IDs 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add integration tests for file operation functions Add 9 tests for writeClaudeMdToFolder and updateFolderClaudeMdFiles: - writeClaudeMdToFolder: folder creation, content preservation, nested dirs, atomic writes - updateFolderClaudeMdFiles: empty skip, fetch/write, deduplication, error handling 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add unit tests for timeline-formatting utilities Add 14 tests for extractFirstFile and groupByDate functions: - extractFirstFile: relative paths, fallback to files_read, null handling, invalid JSON - groupByDate: empty arrays, date grouping, chronological sorting, item preservation 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore: rebuild plugin scripts with merged features * docs: add project-specific CLAUDE.md with architecture and development notes * fix: exclude project root from auto-generated CLAUDE.md updates Skip folders containing .git directory when auto-updating subfolder CLAUDE.md files. This ensures: 1. Root CLAUDE.md remains user-managed and untouched by the system 2. SessionStart context injection stays pristine throughout the session 3. Subfolder CLAUDE.md files continue to receive live context updates 4. Cleaner separation between user-authored root docs and auto-generated folder indexes 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: prevent crash from resuming stale SDK sessions on worker restart When the worker restarts, it was incorrectly passing the `resume` parameter to INIT prompts (lastPromptNumber=1) when a memorySessionId existed from a previous SDK session. This caused "Claude Code process exited with code 1" crashes because the SDK tried to resume into a session that no longer exists. Root cause: The resume condition only checked `hasRealMemorySessionId` but did not verify that this was a CONTINUATION prompt (lastPromptNumber > 1). Fix: Add `session.lastPromptNumber > 1` check to the resume condition: - Before: `...(hasRealMemorySessionId && { resume: session.memorySessionId })` - After: `...(hasRealMemorySessionId && session.lastPromptNumber > 1 && { resume: ... })` Also added: - Enhanced debug logging that warns when skipping resume for INIT prompts - Unit tests in tests/sdk-agent-resume.test.ts (9 test cases) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: properly handle Chroma MCP connection errors Previously, ensureCollection() caught ALL errors from chroma_get_collection_info and assumed they meant "collection doesn't exist", triggering unnecessary collection creation attempts. Connection errors like "Not connected" or "MCP error -32000: Connection closed" would cascade into failed creation attempts. Similarly, queryChroma() would silently return empty results when the MCP call failed, masking the underlying connection problem. Changes: - ensureCollection(): Detect connection errors and re-throw immediately instead of attempting collection creation - queryChroma(): Wrap MCP call in try-catch and throw connection errors instead of returning empty results - Both methods reset connection state (connected=false, client=null) on connection errors so subsequent operations can attempt to reconnect 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * pushed * fix: scope regenerate-claude-md.ts to current working directory Critical bug fix: The script was querying ALL observations from the database across ALL projects ever recorded (1396+ folders), then attempting to write CLAUDE.md files everywhere including other projects, non-existent paths, and ignored directories. Changes: - Use git ls-files to discover folders (respects .gitignore automatically) - Filter database query to current project only (by folder name) - Use relative paths for database queries (matches storage format) - Add --clean flag to remove auto-generated CLAUDE.md files - Add fallback directory walker for non-git repos Now correctly scopes to 26 folders with observations instead of 1396+. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * docs and adjustments * fix: cleanup mode strips tags instead of deleting files blindly The cleanup mode was incorrectly deleting entire files that contained <claude-mem-context> tags. The correct behavior (per original design): 1. Strip the <claude-mem-context>...</claude-mem-context> section 2. If empty after stripping → delete the file 3. If has remaining content → save the stripped version Now properly preserves user content in CLAUDE.md files while removing only the auto-generated sections. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * deleted some files * chore: regenerate folder CLAUDE.md files with fixed script Regenerated 23 folder CLAUDE.md files using the corrected script that: - Scopes to current working directory only - Uses git ls-files to respect .gitignore - Filters by project name 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Update CLAUDE.md files for January 5, 2026 - Regenerated and staged 23 CLAUDE.md files with a mix of new and modified content. - Fixed cleanup mode to properly strip tags instead of deleting files blindly. - Cleaned up empty CLAUDE.md files from various directories, including ~/.claude and ~/Scripts. - Conducted dry-run cleanup that identified a significant reduction in auto-generated CLAUDE.md files. - Removed the isAutoGeneratedClaudeMd function due to incorrect file deletion behavior. * feat: use settings for observation limit in batch regeneration script Replace hard-coded limit of 10 with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). This allows users to control how many observations appear in folder CLAUDE.md files. Changes: - Import SettingsDefaultsManager and load settings at script startup - Use OBSERVATION_LIMIT constant derived from settings at both call sites - Remove stale default parameter from findObservationsByFolder function 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: use settings for observation limit in event-driven updates Replace hard-coded limit of 10 in updateFolderClaudeMdFiles with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). Changes: - Import SettingsDefaultsManager and os module - Load settings at function start (once, not in loop) - Use limit from settings in API call 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: Implement configurable observation limits and enhance search functionality - Added configurable observation limits to batch regeneration scripts. - Enhanced SearchManager to handle folder queries and normalize parameters. - Introduced methods to check for direct child files in observations and sessions. - Updated SearchOptions interface to include isFolder flag for filtering. - Improved code quality with comprehensive reviews and anti-pattern checks. - Cleaned up auto-generated CLAUDE.md files across various directories. - Documented recent changes and improvements in CLAUDE.md files. * build asset * Project Context from Claude-Mem auto-added (can be auto removed at any time) * CLAUDE.md updates * fix: resolve CLAUDE.md files to correct directory in worktree setups When using git worktrees, CLAUDE.md files were being written relative to the worker's process.cwd() instead of the actual project directory. This fix threads the project's cwd from message processing through to the file writing utilities, ensuring CLAUDE.md files are created in the correct project directory regardless of where the worker was started. Changes: - Add projectRoot parameter to updateFolderClaudeMdFiles for path resolution - Thread projectRoot through ResponseProcessor call chain - Track lastCwd from messages in SDKAgent, GeminiAgent, OpenRouterAgent - Add tests for relative/absolute path handling with projectRoot 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * more project context updates * context updates * fix: preserve actual dates in folder CLAUDE.md generation Previously, formatTimelineForClaudeMd used today's date for all observations because the API only returned time (e.g., "4:30 PM") without date information. This caused all historical observations to appear as if they happened today. Changes: - SearchManager.findByFile now groups results by date with headers (e.g., "### Jan 4, 2026") matching formatSearchResults behavior - formatTimelineForClaudeMd now parses these date headers and uses the correct date when constructing epochs for date grouping The timeline dates are critical for claude-mem context - LLMs need accurate temporal context to understand when work happened. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build: update worker assets with date parsing fix 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * claude-mem context: Fixed critical date parsing bug in PR #556 * fix: address PR #556 review items - Use getWorkerHost() instead of hard-coded 127.0.0.1 in claude-md-utils - Add error message and stack details to FOLDER_INDEX logging - Add 5 new tests for worktree/projectRoot path resolution 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor CLAUDE documentation across multiple components and tests - Updated CLAUDE.md files in src/ui/viewer, src/ui/viewer/constants, src/ui/viewer/hooks, tests/server, tests/worker/agents, and plans to reflect recent changes and improvements. - Removed outdated entries and consolidated recent activities for clarity. - Enhanced documentation for hooks, settings, and pagination implementations. - Streamlined test suite documentation for server and worker agents, indicating recent test audits and cleanup efforts. - Adjusted plans to remove obsolete entries and focus on current implementation strategies. * docs: comprehensive v9.0 documentation audit and updates - Add usage/folder-context to docs.json navigation (was documented but hidden!) - Update introduction.mdx with v9.0 release notes (Live Context, Worktree Support, Windows Fixes) - Add CLAUDE_MEM_WORKER_HOST setting to configuration.mdx - Add Folder Context Files section with link to detailed docs - Document worktree support in folder-context.mdx - Update terminology from "mem-search skill" to "MCP tools" throughout active docs - Update Search Pipeline in architecture/overview.mdx - Update usage/getting-started.mdx with MCP tools terminology - Update usage/claude-desktop.mdx title and terminology - Update hooks-architecture.mdx reference 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add recent activity log for worker CLI with detailed entries * chore: update CLAUDE.md context files 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add brainstorming report for CLAUDE.md distribution architecture --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |
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Alex Newman
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f21ea97c39 |
refactor: decompose monolith into modular architecture with comprehensive test suite (#538)
* fix: prevent memory_session_id from equaling content_session_id The bug: memory_session_id was initialized to contentSessionId as a "placeholder for FK purposes". This caused the SDK resume logic to inject memory agent messages into the USER's Claude Code transcript, corrupting their conversation history. Root cause: - SessionStore.createSDKSession initialized memory_session_id = contentSessionId - SDKAgent checked memorySessionId !== contentSessionId but this check only worked if the session was fetched fresh from DB The fix: - SessionStore: Initialize memory_session_id as NULL, not contentSessionId - SDKAgent: Simple truthy check !!session.memorySessionId (NULL = fresh start) - Database migration: Ran UPDATE to set memory_session_id = NULL for 1807 existing sessions that had the bug Also adds [ALIGNMENT] logging across the session lifecycle to help debug session continuity issues: - Hook entry: contentSessionId + promptNumber - DB lookup: contentSessionId → memorySessionId mapping proof - Resume decision: shows which memorySessionId will be used for resume - Capture: logs when memorySessionId is captured from first SDK response UI: Added "Alignment" quick filter button in LogsModal to show only alignment logs for debugging session continuity. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: improve error handling in worker-service.ts - Fix GENERIC_CATCH anti-patterns by logging full error objects instead of just messages - Add [ANTI-PATTERN IGNORED] markers for legitimate cases (cleanup, hot paths) - Simplify error handling comments to be more concise - Improve httpShutdown() error discrimination for ECONNREFUSED - Reduce LARGE_TRY_BLOCK issues in initialization code Part of anti-pattern cleanup plan (132 total issues) * refactor: improve error logging in SearchManager.ts - Pass full error objects to logger instead of just error.message - Fixes PARTIAL_ERROR_LOGGING anti-patterns (10 instances) - Better debugging visibility when Chroma queries fail Part of anti-pattern cleanup (133 remaining) * refactor: improve error logging across SessionStore and mcp-server - SessionStore.ts: Fix error logging in column rename utility - mcp-server.ts: Log full error objects instead of just error.message - Improve error handling in Worker API calls and tool execution Part of anti-pattern cleanup (133 remaining) * Refactor hooks to streamline error handling and loading states - Simplified error handling in useContextPreview by removing try-catch and directly checking response status. - Refactored usePagination to eliminate try-catch, improving readability and maintaining error handling through response checks. - Cleaned up useSSE by removing unnecessary try-catch around JSON parsing, ensuring clarity in message handling. - Enhanced useSettings by streamlining the saving process, removing try-catch, and directly checking the result for success. * refactor: add error handling back to SearchManager Chroma calls - Wrap queryChroma calls in try-catch to prevent generator crashes - Log Chroma errors as warnings and fall back gracefully - Fixes generator failures when Chroma has issues - Part of anti-pattern cleanup recovery * feat: Add generator failure investigation report and observation duplication regression report - Created a comprehensive investigation report detailing the root cause of generator failures during anti-pattern cleanup, including the impact, investigation process, and implemented fixes. - Documented the critical regression causing observation duplication due to race conditions in the SDK agent, outlining symptoms, root cause analysis, and proposed fixes. * fix: address PR #528 review comments - atomic cleanup and detector improvements This commit addresses critical review feedback from PR #528: ## 1. Atomic Message Cleanup (Fix Race Condition) **Problem**: SessionRoutes.ts generator error handler had race condition - Queried messages then marked failed in loop - If crash during loop → partial marking → inconsistent state **Solution**: - Added `markSessionMessagesFailed()` to PendingMessageStore.ts - Single atomic UPDATE statement replaces loop - Follows existing pattern from `resetProcessingToPending()` **Files**: - src/services/sqlite/PendingMessageStore.ts (new method) - src/services/worker/http/routes/SessionRoutes.ts (use new method) ## 2. Anti-Pattern Detector Improvements **Problem**: Detector didn't recognize logger.failure() method - Lines 212 & 335 already included "failure" - Lines 112-113 (PARTIAL_ERROR_LOGGING detection) did not **Solution**: Updated regex patterns to include "failure" for consistency **Files**: - scripts/anti-pattern-test/detect-error-handling-antipatterns.ts ## 3. Documentation **PR Comment**: Added clarification on memory_session_id fix location - Points to SessionStore.ts:1155 - Explains why NULL initialization prevents message injection bug ## Review Response Addresses "Must Address Before Merge" items from review: ✅ Clarified memory_session_id bug fix location (via PR comment) ✅ Made generator error handler message cleanup atomic ❌ Deferred comprehensive test suite to follow-up PR (keeps PR focused) ## Testing - Build passes with no errors - Anti-pattern detector runs successfully - Atomic cleanup follows proven pattern from existing methods 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * fix: FOREIGN KEY constraint and missing failed_at_epoch column Two critical bugs fixed: 1. Missing failed_at_epoch column in pending_messages table - Added migration 20 to create the column - Fixes error when trying to mark messages as failed 2. FOREIGN KEY constraint failed when storing observations - All three agents (SDK, Gemini, OpenRouter) were passing session.contentSessionId instead of session.memorySessionId - storeObservationsAndMarkComplete expects memorySessionId - Added null check and clear error message However, observations still not saving - see investigation report. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com> * Refactor hook input parsing to improve error handling - Added a nested try-catch block in new-hook.ts, save-hook.ts, and summary-hook.ts to handle JSON parsing errors more gracefully. - Replaced direct error throwing with logging of the error details using logger.error. - Ensured that the process exits cleanly after handling input in all three hooks. * docs: add monolith refactor report with system breakdown Comprehensive analysis of codebase identifying: - 14 files over 500 lines requiring refactoring - 3 critical monoliths (SessionStore, SearchManager, worker-service) - 80% code duplication across agent files - 5-phase refactoring roadmap with domain-based architecture * docs: update monolith report post session-logging merge - SessionStore grew to 2,011 lines (49 methods) - highest priority - SearchManager reduced to 1,778 lines (improved) - Agent files reduced by ~45 lines combined - Added trend indicators and post-merge observations - Core refactoring proposal remains valid * refactor(sqlite): decompose SessionStore into modular architecture Extract the 2011-line SessionStore.ts monolith into focused, single-responsibility modules following grep-optimized progressive disclosure pattern: New module structure: - sessions/ - Session creation and retrieval (create.ts, get.ts, types.ts) - observations/ - Observation storage and queries (store.ts, get.ts, recent.ts, files.ts, types.ts) - summaries/ - Summary storage and queries (store.ts, get.ts, recent.ts, types.ts) - prompts/ - User prompt management (store.ts, get.ts, types.ts) - timeline/ - Cross-entity timeline queries (queries.ts) - import/ - Bulk import operations (bulk.ts) - migrations/ - Database migrations (runner.ts) New coordinator files: - Database.ts - ClaudeMemDatabase class with re-exports - transactions.ts - Atomic cross-entity transactions - Named re-export facades (Sessions.ts, Observations.ts, etc.) Key design decisions: - All functions take `db: Database` as first parameter (functional style) - Named re-exports instead of index.ts for grep-friendliness - SessionStore retained as backward-compatible wrapper - Target file size: 50-150 lines (60% compliance) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(agents): extract shared logic into modular architecture Consolidate duplicate code across SDKAgent, GeminiAgent, and OpenRouterAgent into focused utility modules. Total reduction: 500 lines (29%). New modules in src/services/worker/agents/: - ResponseProcessor.ts: Atomic DB transactions, Chroma sync, SSE broadcast - ObservationBroadcaster.ts: SSE event formatting and dispatch - SessionCleanupHelper.ts: Session state cleanup and stuck message reset - FallbackErrorHandler.ts: Provider error detection for fallback logic - types.ts: Shared interfaces (WorkerRef, SSE payloads, StorageResult) Bug fix: SDKAgent was incorrectly using obs.files instead of obs.files_read and hardcoding files_modified to empty array. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(search): extract search strategies into modular architecture Decompose SearchManager into focused strategy pattern with: - SearchOrchestrator: Coordinates strategy selection and fallback - ChromaSearchStrategy: Vector semantic search via ChromaDB - SQLiteSearchStrategy: Filter-only queries for date/project/type - HybridSearchStrategy: Metadata filtering + semantic ranking - ResultFormatter: Markdown table formatting for results - TimelineBuilder: Chronological timeline construction - Filter modules: DateFilter, ProjectFilter, TypeFilter SearchManager now delegates to new infrastructure while maintaining full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(context): decompose context-generator into modular architecture Extract 660-line monolith into focused components: - ContextBuilder: Main orchestrator (~160 lines) - ContextConfigLoader: Configuration loading - TokenCalculator: Token budget calculations - ObservationCompiler: Data retrieval and query building - MarkdownFormatter/ColorFormatter: Output formatting - Section renderers: Header, Timeline, Summary, Footer Maintains full backward compatibility - context-generator.ts now delegates to new ContextBuilder while preserving public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor(worker): decompose worker-service into modular infrastructure Split 2000+ line monolith into focused modules: Infrastructure: - ProcessManager: PID files, signal handlers, child process cleanup - HealthMonitor: Port checks, health polling, version matching - GracefulShutdown: Coordinated cleanup on exit Server: - Server: Express app setup, core routes, route registration - Middleware: Re-exports from existing middleware - ErrorHandler: Centralized error handling with AppError class Integrations: - CursorHooksInstaller: Full Cursor IDE integration (registry, hooks, MCP) WorkerService now acts as thin coordinator wiring all components together. Maintains full backward compatibility with existing public API. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor session queue processing and database interactions - Implement claim-and-delete pattern in SessionQueueProcessor to simplify message handling and eliminate duplicate processing. - Update PendingMessageStore to support atomic claim-and-delete operations, removing the need for intermediate processing states. - Introduce storeObservations method in SessionStore for simplified observation and summary storage without message tracking. - Remove deprecated methods and clean up session state management in worker agents. - Adjust response processing to accommodate new storage patterns, ensuring atomic transactions for observations and summaries. - Remove unnecessary reset logic for stuck messages due to the new queue handling approach. * Add duplicate observation cleanup script Script to clean up duplicate observations created by the batching bug where observations were stored once per message ID instead of once per observation. Includes safety checks to always keep at least one copy. Usage: bun scripts/cleanup-duplicates.ts # Dry run bun scripts/cleanup-duplicates.ts --execute # Delete duplicates bun scripts/cleanup-duplicates.ts --aggressive # Ignore time window 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(sqlite): add comprehensive test suite for SQLite repositories Add 44 tests across 5 test files covering: - Sessions: CRUD operations and schema validation - Observations: creation, retrieval, filtering, and ordering - Prompts: persistence and association with observations - Summaries: generation tracking and session linkage - Transactions: context management and rollback behavior 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(worker): add comprehensive test suites for worker agent modules Add test coverage for response-processor, observation-broadcaster, session-cleanup-helper, and fallback-error-handler agents. Fix type import issues across search module (use `import type` for type-only imports) and update worker-service main module detection for ESM/CJS compatibility. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(search): add comprehensive test suites for search module Add test coverage for the refactored search architecture: - SearchOrchestrator: query coordination and caching - ResultFormatter: pagination, sorting, and field mapping - SQLiteSearchStrategy: database search operations - ChromaSearchStrategy: vector similarity search - HybridSearchStrategy: combined search with score fusion 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(context): add comprehensive test suites for context-generator modules Add test coverage for the modular context-generator architecture: - context-builder.test.ts: Tests for context building and result assembly - observation-compiler.test.ts: Tests for observation compilation with privacy tags - token-calculator.test.ts: Tests for token budget calculations - formatters/markdown-formatter.test.ts: Tests for markdown output formatting 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(infrastructure): add comprehensive test suites for worker infrastructure modules Add test coverage for graceful-shutdown, health-monitor, and process-manager modules extracted during the worker-service refactoring. All 32 tests pass. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test(server): add comprehensive test suites for server modules Add test coverage for Express server infrastructure: - error-handler.test.ts: Tests error handling middleware including validation errors, database errors, and async error handling - server.test.ts: Tests server initialization, middleware configuration, and route mounting for all API endpoints 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore(package): add test scripts for modular test suites Add npm run scripts to simplify running tests: - test: run all tests - test:sqlite, test:agents, test:search, test:context, test:infra, test:server 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets * feat(tests): add detailed failure analysis reports for session ID refactor, validation, and store tests - Created reports for session ID refactor test failures, highlighting 8 failures due to design mismatches. - Added session ID usage validation report detailing 10 failures caused by outdated assumptions in tests. - Documented session store test failures, focusing on foreign key constraint violations in 2 tests. - Compiled a comprehensive test suite report summarizing overall test results, including 28 failing tests across various categories. * fix(tests): align session ID tests with NULL-based initialization Update test expectations to match implementation where memory_session_id starts as NULL (not equal to contentSessionId) per architecture decision that memory_session_id must NEVER equal contentSessionId. Changes: - session_id_refactor.test.ts: expect NULL initial state, add updateMemorySessionId() calls - session_id_usage_validation.test.ts: update placeholder detection to check !== null - session_store.test.ts: add updateMemorySessionId() before storeObservation/storeSummary 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix(tests): update GeminiAgent tests with correct field names and mocks - Rename deprecated fields: claudeSessionId → contentSessionId, sdkSessionId → memorySessionId, pendingProcessingIds → pendingMessages - Add missing required ActiveSession fields - Add storeObservations mock (plural) for ResponseProcessor compatibility - Fix settings mock to use correct CLAUDE_MEM_GEMINI_RATE_LIMITING_ENABLED key - Add await to rejects.toThrow assertion 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat(tests): add logger imports and fix coverage test exclusions Phase 3 of test suite fixes: - Add logger imports to 34 high-priority source files (SQLite, worker, context) - Exclude CLI-facing files from console.log check (worker-service.ts, integrations/*Installer.ts) as they use console.log intentionally for interactive user output 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * docs: update SESSION_ID_ARCHITECTURE for NULL-based initialization Update documentation to reflect that memory_session_id starts as NULL, not as a placeholder equal to contentSessionId. This matches the implementation decision that memory_session_id must NEVER equal contentSessionId to prevent injecting memory messages into user transcripts. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore(deps): update esbuild and MCP SDK - esbuild: 0.25.12 → 0.27.2 (fixes minifyIdentifiers issue) - @modelcontextprotocol/sdk: 1.20.1 → 1.25.1 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build assets and updates * chore: remove bun.lock and add to gitignore 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com> |