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* docs: add folder index generator plan RFC for auto-generating folder-level CLAUDE.md files with observation timelines. Includes IDE symlink support and root CLAUDE.md integration. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: implement folder index generator (Phase 1) Add automatic CLAUDE.md generation for folders containing observed files. This enables IDE context providers to access relevant memory observations. Core modules: - FolderDiscovery: Extract folders from observation file paths - FolderTimelineCompiler: Compile chronological timeline per folder - ClaudeMdGenerator: Write CLAUDE.md with tag-based content replacement - FolderIndexOrchestrator: Coordinate regeneration on observation save Integration: - Event-driven regeneration after observation save in ResponseProcessor - HTTP endpoints for folder discovery, timeline, and manual generation - Settings for enabling/configuring folder index behavior The <claude-mem-context> tag wrapping ensures: - Manual CLAUDE.md content is preserved - Auto-generated content won't be recursively observed - Clean separation between user and system content 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add updateFolderClaudeMd function to CursorHooksInstaller Adds function to update CLAUDE.md files for folders touched by observations. Uses existing /api/search/by-file endpoint, preserves content outside <claude-mem-context> tags, and writes atomically via temp file + rename. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: hook updateFolderClaudeMd into ResponseProcessor Calls updateFolderClaudeMd after observation save to update folder-level CLAUDE.md files. Uses fire-and-forget pattern with error logging. Extracts file paths from saved observations and workspace path from registry. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add timeline formatting for folder CLAUDE.md files Implements formatTimelineForClaudeMd function that transforms API response into compact markdown table format. Converts emojis to text labels, handles ditto marks for timestamps, and groups under "Recent" header. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * refactor: remove old folder-index implementation Deletes redundant folder-index services that were replaced by the simpler updateFolderClaudeMd approach in CursorHooksInstaller.ts. Removed: - src/services/folder-index/ directory (5 files) - FolderIndexRoutes.ts - folder-index settings from SettingsDefaultsManager - folder-index route registration from worker-service 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add worktree-aware project filtering for unified timelines Detect git worktrees and show both parent repo and worktree observations in the session start timeline. When running in a worktree, the context now includes observations from both projects, interleaved chronologically. - Add detectWorktree() utility to identify worktree directories - Add getProjectContext() to return parent + worktree projects - Update context hook to pass multi-project queries - Add queryObservationsMulti() and querySummariesMulti() for IN clauses - Maintain backward compatibility with single-project queries 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * fix: restructure logging to prove session correctness and reduce noise Add critical logging at each stage of the session lifecycle to prove the session ID chain (contentSessionId → sessionDbId → memorySessionId) stays aligned. New logs include CREATED, ENQUEUED, CLAIMED, MEMORY_ID_CAPTURED, STORING, and STORED. Move intermediate migration and backfill progress logs to DEBUG level to reduce noise, keeping only essential initialization and completion logs at INFO level. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> * refactor: extract folder CLAUDE.md utils to shared location Moves folder CLAUDE.md utilities from CursorHooksInstaller to a new shared utils file. Removes Cursor registry dependency - file paths from observations are already absolute, no workspace lookup needed. New file: src/utils/claude-md-utils.ts - replaceTaggedContent() - preserves user content outside tags - writeClaudeMdToFolder() - atomic writes with tag preservation - formatTimelineForClaudeMd() - API response to compact markdown - updateFolderClaudeMdFiles() - orchestrates folder updates 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: trigger folder CLAUDE.md updates when observations are saved The folder CLAUDE.md update was previously only triggered in syncAndBroadcastSummary, but summaries run with observationCount=0 (observations are saved separately). Moved the update logic to syncAndBroadcastObservations where file paths are available. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * all the claudes * test: add unit tests for claude-md-utils pure functions Add 11 tests covering replaceTaggedContent and formatTimelineForClaudeMd: - replaceTaggedContent: empty content, tag replacement, appending, partial tags - formatTimelineForClaudeMd: empty input, parsing, ditto marks, session IDs 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add integration tests for file operation functions Add 9 tests for writeClaudeMdToFolder and updateFolderClaudeMdFiles: - writeClaudeMdToFolder: folder creation, content preservation, nested dirs, atomic writes - updateFolderClaudeMdFiles: empty skip, fetch/write, deduplication, error handling 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * test: add unit tests for timeline-formatting utilities Add 14 tests for extractFirstFile and groupByDate functions: - extractFirstFile: relative paths, fallback to files_read, null handling, invalid JSON - groupByDate: empty arrays, date grouping, chronological sorting, item preservation 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * chore: rebuild plugin scripts with merged features * docs: add project-specific CLAUDE.md with architecture and development notes * fix: exclude project root from auto-generated CLAUDE.md updates Skip folders containing .git directory when auto-updating subfolder CLAUDE.md files. This ensures: 1. Root CLAUDE.md remains user-managed and untouched by the system 2. SessionStart context injection stays pristine throughout the session 3. Subfolder CLAUDE.md files continue to receive live context updates 4. Cleaner separation between user-authored root docs and auto-generated folder indexes 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: prevent crash from resuming stale SDK sessions on worker restart When the worker restarts, it was incorrectly passing the `resume` parameter to INIT prompts (lastPromptNumber=1) when a memorySessionId existed from a previous SDK session. This caused "Claude Code process exited with code 1" crashes because the SDK tried to resume into a session that no longer exists. Root cause: The resume condition only checked `hasRealMemorySessionId` but did not verify that this was a CONTINUATION prompt (lastPromptNumber > 1). Fix: Add `session.lastPromptNumber > 1` check to the resume condition: - Before: `...(hasRealMemorySessionId && { resume: session.memorySessionId })` - After: `...(hasRealMemorySessionId && session.lastPromptNumber > 1 && { resume: ... })` Also added: - Enhanced debug logging that warns when skipping resume for INIT prompts - Unit tests in tests/sdk-agent-resume.test.ts (9 test cases) 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * fix: properly handle Chroma MCP connection errors Previously, ensureCollection() caught ALL errors from chroma_get_collection_info and assumed they meant "collection doesn't exist", triggering unnecessary collection creation attempts. Connection errors like "Not connected" or "MCP error -32000: Connection closed" would cascade into failed creation attempts. Similarly, queryChroma() would silently return empty results when the MCP call failed, masking the underlying connection problem. Changes: - ensureCollection(): Detect connection errors and re-throw immediately instead of attempting collection creation - queryChroma(): Wrap MCP call in try-catch and throw connection errors instead of returning empty results - Both methods reset connection state (connected=false, client=null) on connection errors so subsequent operations can attempt to reconnect 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * pushed * fix: scope regenerate-claude-md.ts to current working directory Critical bug fix: The script was querying ALL observations from the database across ALL projects ever recorded (1396+ folders), then attempting to write CLAUDE.md files everywhere including other projects, non-existent paths, and ignored directories. Changes: - Use git ls-files to discover folders (respects .gitignore automatically) - Filter database query to current project only (by folder name) - Use relative paths for database queries (matches storage format) - Add --clean flag to remove auto-generated CLAUDE.md files - Add fallback directory walker for non-git repos Now correctly scopes to 26 folders with observations instead of 1396+. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * docs and adjustments * fix: cleanup mode strips tags instead of deleting files blindly The cleanup mode was incorrectly deleting entire files that contained <claude-mem-context> tags. The correct behavior (per original design): 1. Strip the <claude-mem-context>...</claude-mem-context> section 2. If empty after stripping → delete the file 3. If has remaining content → save the stripped version Now properly preserves user content in CLAUDE.md files while removing only the auto-generated sections. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * deleted some files * chore: regenerate folder CLAUDE.md files with fixed script Regenerated 23 folder CLAUDE.md files using the corrected script that: - Scopes to current working directory only - Uses git ls-files to respect .gitignore - Filters by project name 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Update CLAUDE.md files for January 5, 2026 - Regenerated and staged 23 CLAUDE.md files with a mix of new and modified content. - Fixed cleanup mode to properly strip tags instead of deleting files blindly. - Cleaned up empty CLAUDE.md files from various directories, including ~/.claude and ~/Scripts. - Conducted dry-run cleanup that identified a significant reduction in auto-generated CLAUDE.md files. - Removed the isAutoGeneratedClaudeMd function due to incorrect file deletion behavior. * feat: use settings for observation limit in batch regeneration script Replace hard-coded limit of 10 with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). This allows users to control how many observations appear in folder CLAUDE.md files. Changes: - Import SettingsDefaultsManager and load settings at script startup - Use OBSERVATION_LIMIT constant derived from settings at both call sites - Remove stale default parameter from findObservationsByFolder function 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: use settings for observation limit in event-driven updates Replace hard-coded limit of 10 in updateFolderClaudeMdFiles with configurable CLAUDE_MEM_CONTEXT_OBSERVATIONS setting (default: 50). Changes: - Import SettingsDefaultsManager and os module - Load settings at function start (once, not in loop) - Use limit from settings in API call 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: Implement configurable observation limits and enhance search functionality - Added configurable observation limits to batch regeneration scripts. - Enhanced SearchManager to handle folder queries and normalize parameters. - Introduced methods to check for direct child files in observations and sessions. - Updated SearchOptions interface to include isFolder flag for filtering. - Improved code quality with comprehensive reviews and anti-pattern checks. - Cleaned up auto-generated CLAUDE.md files across various directories. - Documented recent changes and improvements in CLAUDE.md files. * build asset * Project Context from Claude-Mem auto-added (can be auto removed at any time) * CLAUDE.md updates * fix: resolve CLAUDE.md files to correct directory in worktree setups When using git worktrees, CLAUDE.md files were being written relative to the worker's process.cwd() instead of the actual project directory. This fix threads the project's cwd from message processing through to the file writing utilities, ensuring CLAUDE.md files are created in the correct project directory regardless of where the worker was started. Changes: - Add projectRoot parameter to updateFolderClaudeMdFiles for path resolution - Thread projectRoot through ResponseProcessor call chain - Track lastCwd from messages in SDKAgent, GeminiAgent, OpenRouterAgent - Add tests for relative/absolute path handling with projectRoot 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * more project context updates * context updates * fix: preserve actual dates in folder CLAUDE.md generation Previously, formatTimelineForClaudeMd used today's date for all observations because the API only returned time (e.g., "4:30 PM") without date information. This caused all historical observations to appear as if they happened today. Changes: - SearchManager.findByFile now groups results by date with headers (e.g., "### Jan 4, 2026") matching formatSearchResults behavior - formatTimelineForClaudeMd now parses these date headers and uses the correct date when constructing epochs for date grouping The timeline dates are critical for claude-mem context - LLMs need accurate temporal context to understand when work happened. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * build: update worker assets with date parsing fix 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * claude-mem context: Fixed critical date parsing bug in PR #556 * fix: address PR #556 review items - Use getWorkerHost() instead of hard-coded 127.0.0.1 in claude-md-utils - Add error message and stack details to FOLDER_INDEX logging - Add 5 new tests for worktree/projectRoot path resolution 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * Refactor CLAUDE documentation across multiple components and tests - Updated CLAUDE.md files in src/ui/viewer, src/ui/viewer/constants, src/ui/viewer/hooks, tests/server, tests/worker/agents, and plans to reflect recent changes and improvements. - Removed outdated entries and consolidated recent activities for clarity. - Enhanced documentation for hooks, settings, and pagination implementations. - Streamlined test suite documentation for server and worker agents, indicating recent test audits and cleanup efforts. - Adjusted plans to remove obsolete entries and focus on current implementation strategies. * docs: comprehensive v9.0 documentation audit and updates - Add usage/folder-context to docs.json navigation (was documented but hidden!) - Update introduction.mdx with v9.0 release notes (Live Context, Worktree Support, Windows Fixes) - Add CLAUDE_MEM_WORKER_HOST setting to configuration.mdx - Add Folder Context Files section with link to detailed docs - Document worktree support in folder-context.mdx - Update terminology from "mem-search skill" to "MCP tools" throughout active docs - Update Search Pipeline in architecture/overview.mdx - Update usage/getting-started.mdx with MCP tools terminology - Update usage/claude-desktop.mdx title and terminology - Update hooks-architecture.mdx reference 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add recent activity log for worker CLI with detailed entries * chore: update CLAUDE.md context files 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com> * feat: add brainstorming report for CLAUDE.md distribution architecture --------- Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>
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---
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title: "Folder Context Files"
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description: "Automatic per-folder CLAUDE.md files that provide directory-level context to Claude"
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---
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## Overview
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Claude-mem automatically generates `CLAUDE.md` files in your project folders to provide Claude with directory-level context. These files contain a summary of recent activity in each folder, helping Claude understand what work has been done and where.
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<Info>
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This feature is **disabled by default**. Enable it via settings if you want automatic folder-level context generation.
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</Info>
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## How It Works
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When you work with Claude Code in a project, claude-mem tracks which files are read and modified. After each observation is saved, it automatically:
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1. Identifies unique folder paths from touched files
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2. Queries recent observations relevant to each folder
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3. Generates a formatted timeline of activity
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4. Writes it to `CLAUDE.md` in that folder (inside `<claude-mem-context>` tags)
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### What Gets Generated
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Each folder's `CLAUDE.md` contains a "Recent Activity" section showing:
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- Observation IDs for reference
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- Timestamps of when work occurred
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- Type indicators (bug fixes, features, discoveries, etc.)
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- Brief titles describing the work
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- Estimated token counts
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```markdown
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<claude-mem-context>
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# Recent Activity
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<!-- This section is auto-generated by claude-mem. Edit content outside the tags. -->
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### Jan 4, 2026
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| ID | Time | T | Title | Read |
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|----|------|---|-------|------|
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| #1234 | 4:30 PM | 🔵 | Implemented user authentication | ~250 |
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| #1235 | " | 🔴 | Fixed login redirect bug | ~180 |
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</claude-mem-context>
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```
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### User Content Preservation
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The auto-generated content is wrapped in `<claude-mem-context>` tags. **Any content you write outside these tags is preserved** when the file is regenerated. This means you can:
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- Add your own documentation above or below the generated section
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- Write folder-specific instructions for Claude
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- Include architectural notes or conventions
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```markdown
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# Authentication Module
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This folder contains all authentication-related code.
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Follow the established patterns for new auth providers.
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<claude-mem-context>
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... auto-generated content ...
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</claude-mem-context>
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## Manual Notes
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- OAuth providers go in /providers/
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- Session handling uses Redis
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```
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### Project Root Exclusion
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The **project root** (folders containing a `.git` directory) is **excluded** from auto-generation. This is intentional:
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- Root `CLAUDE.md` files typically contain project-wide instructions you've written manually
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- Auto-generating at the root could overwrite important project documentation
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- Subfolders are where folder-level context is most useful
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<Note>
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Git submodules (which have a `.git` *file* instead of directory) are correctly detected and **not** excluded, so they receive auto-generated context.
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</Note>
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## Configuration
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### Enabling the Feature
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To enable folder CLAUDE.md generation, edit your settings file:
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**1. Open `~/.claude-mem/settings.json`**
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**2. Add or update this setting:**
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```json
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{
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"CLAUDE_MEM_FOLDER_CLAUDEMD_ENABLED": "true"
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}
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```
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**3. Save the file** - changes take effect immediately (no restart needed)
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| Value | Behavior |
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|-------|----------|
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| `"false"` (default) | Folder CLAUDE.md generation disabled |
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| `"true"` | Auto-generate folder CLAUDE.md files |
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<Tip>
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If the settings file doesn't exist, create it with just the settings you want to change. Claude-mem will use defaults for any missing settings.
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</Tip>
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## Cleanup Mode
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The regenerate script includes a `--clean` mode for removing auto-generated content:
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```bash
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# Preview what would be cleaned (dry run)
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bun scripts/regenerate-claude-md.ts --clean --dry-run
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# Actually clean files
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bun scripts/regenerate-claude-md.ts --clean
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```
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**What cleanup does:**
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1. Finds all `CLAUDE.md` files recursively
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2. Strips `<claude-mem-context>...</claude-mem-context>` sections
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3. **Deletes** files that become empty after stripping
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4. **Preserves** files that have user content outside the tags
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This is useful for:
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- Preparing a branch for PR (removing generated files)
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- Resetting folder context to start fresh
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- Removing context before sharing code
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## Git Integration
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### Should You Commit These Files?
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This is **your choice** based on your workflow. Here are the trade-offs:
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<Tabs>
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<Tab title="Commit Them">
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**Pros:**
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- Team members see folder-level context and recent activity
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- New contributors can understand what happened where
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- Code reviewers get additional context about changes
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- Historical record of work patterns in the repo
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**Cons:**
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- Adds files to your repository
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- Files change frequently during development
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- May create noise in diffs and commit history
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- Different team members may generate different content
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</Tab>
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<Tab title="Gitignore Them">
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**Pros:**
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- Clean repository without generated files
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- No commit noise from auto-generated content
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- Each developer has their own local context
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- Simpler git history
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**Cons:**
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- Team doesn't share folder context
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- Context is lost when switching machines
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- New team members don't benefit from existing context
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</Tab>
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</Tabs>
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### Gitignore Pattern
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To exclude folder CLAUDE.md files from git:
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```gitignore
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# Ignore auto-generated folder context files
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**/CLAUDE.md
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# But keep the root CLAUDE.md if you want
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!CLAUDE.md
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```
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Or to ignore all CLAUDE.md files everywhere:
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```gitignore
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**/CLAUDE.md
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```
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### Recommended Workflows
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**For Solo Developers:**
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- Keep them local (gitignore) for personal context
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- Or commit them if you work across multiple machines
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**For Teams:**
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- Discuss with your team which approach works best
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- Consider committing them if onboarding is frequent
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- Use `--clean` before PRs if you prefer clean diffs
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**Before Merging PRs:**
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```bash
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# Clean up generated files before merge
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bun scripts/regenerate-claude-md.ts --clean
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git add -A
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git commit -m "chore: clean up generated CLAUDE.md files"
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```
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## Regenerating Context
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To manually regenerate all folder CLAUDE.md files from the database:
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```bash
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# Preview what would be regenerated
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bun scripts/regenerate-claude-md.ts --dry-run
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# Regenerate all folders
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bun scripts/regenerate-claude-md.ts
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# Regenerate for a specific project only
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bun scripts/regenerate-claude-md.ts --project=my-project
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```
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This is useful after:
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- Importing observations from another machine
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- Database recovery
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- Wanting to refresh all folder context
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## Worktree Support
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**New in v9.0**: Claude-mem now supports git worktrees with unified context.
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When you're working in a git worktree, context is automatically gathered from both:
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- The parent repository (where the worktree was created)
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- The worktree directory itself
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This means observations about shared code are visible regardless of which worktree you're in, giving you a complete picture of recent activity across all related directories.
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### How It Works
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1. When generating context, claude-mem detects if your project is a worktree
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2. It identifies the parent repository automatically
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3. Timeline queries include both locations
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4. Results are interleaved chronologically
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<Note>
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No configuration needed - worktree detection is automatic. If you're not using worktrees, this feature has no effect.
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</Note>
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## Technical Details
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### File Format
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Generated content uses a consistent markdown table format:
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| Column | Description |
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|--------|-------------|
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| ID | Observation ID (e.g., `#1234`) or session ID (`#S123`) |
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| Time | 12-hour format with AM/PM, ditto marks (`"`) for repeated times |
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| T | Type emoji indicator |
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| Title | Brief description of the observation |
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| Read | Estimated token count (e.g., `~250`) |
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### Type Indicators
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| Emoji | Type |
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|-------|------|
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| 🔴 | Bug fix |
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| 🟣 | Feature |
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| 🔄 | Refactor |
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| ✅ | Change |
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| 🔵 | Discovery |
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| ⚖️ | Decision |
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| 🎯 | Session |
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| 💬 | Prompt |
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### Atomic Writes
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Files are written atomically using a temp file + rename pattern. This prevents partial writes if the process is interrupted.
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### Performance
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- Updates happen asynchronously (fire-and-forget)
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- Failures are logged but don't block the main workflow
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- Only folders with actual file activity are updated
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- Deduplication prevents redundant updates for the same folder
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