Fixes#353 - Observations not being saved due to incomplete pending messages implementation
Changes:
- PendingMessageStore.markProcessed() now clears tool_input and tool_response
- PendingMessageStore.cleanupProcessed() changed from time-based to count-based retention
- Keeps most recent 100 processed messages for UI display
- SDKAgent.processSDKResponse() calls cleanup after marking messages processed
This prevents the database from growing unbounded with duplicate transcript data.
The pending_messages table now only stores full transcripts for pending/processing
messages, while processed messages keep metadata only.
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Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
Alex Newman
d6cd9e6059