fix: Chroma connection errors and remove dead last_user_message code (#525)

* fix: distinguish connection errors from collection-not-found in ChromaSync

Previously, ensureCollection() caught ALL errors from chroma_get_collection_info
and assumed they meant "collection doesn't exist". This caused connection errors
like "Not connected" to trigger unnecessary collection creation attempts.

Now connection-related errors are re-thrown immediately instead of being
misinterpreted as missing collections.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* fix: improve error handling for Chroma connection and collection creation

* fix: remove dead last_user_message from summarize flow

The last_user_message field was extracted from transcripts but never used.
In Claude Code transcripts, "user" type messages are mostly tool_results,
not actual user input. The user's original request is already stored in
user_prompts table.

This removes the false warning "Missing last_user_message when queueing
summary" which was complaining about missing data that didn't exist and
wasn't needed.

Changes:
- summary-hook: Only extract last_assistant_message
- SessionRoutes: Remove last_user_message from request body handling
- SessionManager.queueSummarize: Remove lastUserMessage parameter
- PendingMessage interface: Remove last_user_message field
- SDKSession interface: Remove last_user_message field
- All agents: Remove last_user_message from buildSummaryPrompt calls

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

* build artifacts for plugin

* Enhance error handling across multiple services

- Improved logging in `BranchManager.ts` to capture recovery checkout failures.
- Updated `PaginationHelper.ts` to log when file paths are plain strings instead of valid JSON.
- Enhanced error logging in `SDKAgent.ts` for Claude executable detection failures.
- Added logging for plain string handling in `SearchManager.ts` for files read and edited.
- Improved logging in `paths.ts` for git root detection failures.
- Enhanced JSON parsing error handling in `timeline-formatting.ts` with previews of failed inputs.
- Updated `transcript-parser.ts` to log summary of parse errors after processing transcript lines.
- Established a baseline for error handling practices in `error-handling-baseline.txt`.
- Documented error handling anti-pattern rules in `CLAUDE.md` to prevent silent failures and improve code quality.

* Add error handling anti-pattern detection script and guidelines

- Introduced `detect-error-handling-antipatterns.ts` to identify common error handling issues in TypeScript code.
- Created comprehensive documentation in `CLAUDE.md` outlining forbidden patterns, allowed patterns, and critical path protection rules.
- Implemented checks for empty catch blocks, logging practices, and try-catch block sizes to prevent silent failures and improve debugging.
- Established a reporting mechanism to summarize detected anti-patterns with severity levels.

* feat: add console filter bar and log line parsing with filtering capabilities

- Introduced a console filter bar with options to filter logs by level and component.
- Implemented parsing of log lines to extract structured data including timestamp, level, component, and correlation ID.
- Added functionality to toggle individual and all levels/components for filtering.
- Enhanced log line rendering with color coding based on log level and special message types.
- Improved responsiveness of the filter bar for smaller screens.

---------

Co-authored-by: Claude Opus 4.5 <noreply@anthropic.com>

src/services/worker-service.ts

@@ -66,8 +66,8 @@ function removePidFile(): void {
   try {
     if (existsSync(PID_FILE)) unlinkSync(PID_FILE);
   } catch (error) {
-    // PID file removal is cleanup - log but don't fail shutdown
-    logger.warn('SYSTEM', 'Failed to remove PID file', { path: PID_FILE, error: (error as Error).message });
+    logger.warn('SYSTEM', 'Failed to remove PID file', { path: PID_FILE }, error as Error);
+    return; // Non-critical cleanup, OK to fail
   }
 }
 
@@ -129,8 +129,8 @@ export async function updateCursorContextForProject(projectName: string, port: n
     writeContextFile(entry.workspacePath, context);
     logger.debug('CURSOR', 'Updated context file', { projectName, workspacePath: entry.workspacePath });
   } catch (error) {
-    // Context update is non-critical - log and continue
-    logger.warn('CURSOR', 'Failed to update context file', { projectName, error: (error as Error).message });
+    logger.warn('CURSOR', 'Failed to update context file', { projectName }, error as Error);
+    return; // Non-critical context update, OK to fail
   }
 }
 
@@ -150,8 +150,7 @@ async function isPortInUse(port: number): Promise<boolean> {
     const response = await fetch(`http://127.0.0.1:${port}/api/health`);
     return response.ok;
   } catch (error) {
-    // Expected: port is free or service not responding
-    // Not logging - this is called frequently for health checks
+    // [ANTI-PATTERN IGNORED]: Health check polls every 500ms, logging would flood
     return false;
   }
 }
@@ -164,10 +163,8 @@ async function waitForHealth(port: number, timeoutMs: number = 30000): Promise<b
       const response = await fetch(`http://127.0.0.1:${port}/api/readiness`);
       if (response.ok) return true;
     } catch (error) {
-      logger.debug('SYSTEM', 'Service not ready yet, will retry', {
-        port,
-        error: error instanceof Error ? error.message : String(error)
-      });
+      // [ANTI-PATTERN IGNORED]: Retry loop - expected failures during startup, will retry
+      logger.debug('SYSTEM', 'Service not ready yet, will retry', { port }, error as Error);
     }
     await new Promise(r => setTimeout(r, 500));
   }
@@ -370,7 +367,7 @@ export class WorkerService {
         process.exit(0);
       } catch (error) {
         logger.error('SYSTEM', 'Error during shutdown', {}, error as Error);
-        process.exit(1);
+        process.exit(1); // Exit with error code - this terminates execution
       }
     };
 
@@ -459,6 +456,7 @@ export class WorkerService {
           }]
         });
       } catch (error) {
+        // [POSSIBLY RELEVANT]: API must respond even on error, log full error and return error response
         logger.error('WORKER', 'Failed to load instructions', { topic, operation }, error as Error);
         res.status(500).json({
           content: [{
@@ -543,6 +541,7 @@ export class WorkerService {
         // This avoids code duplication and "headers already sent" errors
         next();
       } catch (error) {
+        // [POSSIBLY RELEVANT]: API must respond even on error, log full error and return error response
         logger.error('WORKER', 'Context inject handler failed', {}, error as Error);
         if (!res.headersSent) {
           res.status(500).json({ error: error instanceof Error ? error.message : 'Internal server error' });
@@ -621,19 +620,17 @@ export class WorkerService {
         try {
           execSync(`taskkill /PID ${pid} /T /F`, { timeout: 60000, stdio: 'ignore' });
         } catch (error) {
-          logger.debug('SYSTEM', 'Failed to kill process, may have already exited', {
-            pid,
-            error: error instanceof Error ? error.message : String(error)
-          });
+          // [ANTI-PATTERN IGNORED]: Cleanup loop - process may have exited, continue to next PID
+          logger.debug('SYSTEM', 'Failed to kill process, may have already exited', { pid }, error as Error);
         }
       }
     } else {
       for (const pid of pids) {
         try {
           process.kill(pid, 'SIGKILL');
-        } catch {
-          // Process already exited - expected during cleanup
-          logger.debug('SYSTEM', 'Process already exited', { pid });
+        } catch (error) {
+          // [ANTI-PATTERN IGNORED]: Cleanup loop - process may have exited, continue to next PID
+          logger.debug('SYSTEM', 'Process already exited', { pid }, error as Error);
         }
       }
     }
@@ -838,7 +835,7 @@ export class WorkerService {
         // Small delay between sessions to avoid rate limiting
         await new Promise(resolve => setTimeout(resolve, 100));
       } catch (error) {
-        // Recovery is best-effort - skip failed sessions and continue with others
+        // [ANTI-PATTERN IGNORED]: Recovery loop - skip failed session, continue to next
         logger.warn('SYSTEM', `Failed to process session ${sessionDbId}`, {}, error as Error);
         result.sessionsSkipped++;
       }
@@ -986,9 +983,9 @@ export class WorkerService {
         process.kill(pid, 'SIGKILL');
       }
       logger.info('SYSTEM', 'Killed process', { pid });
-    } catch {
-      // Process may have already exited - continue shutdown
-      logger.debug('SYSTEM', 'Process already exited during force kill', { pid });
+    } catch (error) {
+      // [ANTI-PATTERN IGNORED]: Shutdown cleanup - process already exited, continue
+      logger.debug('SYSTEM', 'Process already exited during force kill', { pid }, error as Error);
     }
   }
 
@@ -1004,8 +1001,7 @@ export class WorkerService {
           process.kill(pid, 0);
           return true;
         } catch (error) {
-          // Expected: process has exited
-          // Not logging - this is called in a tight loop during cleanup
+          // [ANTI-PATTERN IGNORED]: Tight loop checking 100s of PIDs every 100ms during cleanup
           return false;
         }
       });
@@ -1094,8 +1090,9 @@ async function runInteractiveSetup(): Promise<number> {
     if (existsSync(settingsPath)) {
       try {
         settings = JSON.parse(readFileSync(settingsPath, 'utf-8'));
-      } catch {
-        // Start fresh if corrupt
+      } catch (error) {
+        // [ANTI-PATTERN IGNORED]: Fallback behavior - corrupt settings, continue with defaults
+        logger.debug('SETUP', 'Corrupt settings file, starting fresh', { path: settingsPath }, error as Error);
       }
     }
 
@@ -1300,8 +1297,9 @@ async function detectClaudeCode(): Promise<boolean> {
     if (stdout.trim()) {
       return true;
     }
-  } catch {
-    // CLI not found
+  } catch (error) {
+    // [ANTI-PATTERN IGNORED]: Fallback behavior - CLI not found, continue to directory check
+    logger.debug('SYSTEM', 'Claude CLI not in PATH', {}, error as Error);
   }
 
   // Check for Claude Code plugin directory
@@ -1413,8 +1411,8 @@ function configureCursorMcp(target: string): number {
           config.mcpServers = {};
         }
       } catch (error) {
-        // Start fresh if corrupt
-        logger.warn('SYSTEM', 'Corrupt mcp.json, creating new config', { path: mcpJsonPath, error: error instanceof Error ? error.message : String(error) });
+        // [ANTI-PATTERN IGNORED]: Fallback behavior - corrupt config, continue with empty
+        logger.warn('SYSTEM', 'Corrupt mcp.json, creating new config', { path: mcpJsonPath }, error as Error);
         config = { mcpServers: {} };
       }
     }
@@ -1669,8 +1667,9 @@ ${context}
             }
           }
         }
-      } catch {
-        // Worker not running - that's ok, context will be generated after first session
+      } catch (error) {
+        // [ANTI-PATTERN IGNORED]: Fallback behavior - worker not running, use placeholder
+        logger.debug('CURSOR', 'Worker not running during install', {}, error as Error);
       }
       
       if (!contextGenerated) {